Salmo trutta (river trout): 115180530
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Entry
115180530 CDS
T08542
Name
(RefSeq) zinc finger protein ZFMSA12A-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115180530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115180530
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115180530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
TINF2_N
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_11
zf-C2H2_6
zf-met
zf-C2HE
Zn-ribbon_8
Motif
Other DBs
NCBI-GeneID:
115180530
NCBI-ProteinID:
XP_029598552
Ensembl:
ENSSTUG00000042868
LinkDB
All DBs
Position
40:7942077..7959389
Genome browser
AA seq
755 aa
AA seq
DB search
MRRSLAKVAKILIGTWAIMDSPIPLSSLRLLVPPLRLMSAFMWQVAQQRAIKHYGKLEEF
VTVVTQTVPELMTDRQRTLLILGLRARVNPVSLQTLLYRIKSSQHAQSNDAGMESPEANF
AKLTQSLIIDPVEREHFVQVVFPEEFRPDFDQVLQELVCDFLTRLEELLTLPDFKQTALL
LSAGSSGLDECLQSFSHSEDLQFLLQNYKQCRTLYTNISSSDIPQESDIESDAFPDQLNR
TNLDTGVGMRTGIQSRDCQRMELASHLVEMGSTRDIIGCDETCDEGNEDDIDVEDDPTQK
RAGSGLSPTSVMQGGDTDTVAGVSFQVLTPLSSASNECAPSTSSSSHMVVHQCPQCGKCF
NYQSQLVQHQQIHCGDNPYKCSNCGNRFKFFTSLSNHKRMQCVGTAFSCLKCWREFGSLR
EKLRHQCPHNEVMYICPQSGKSFKTPQQQPFQCRHCAMAFSEMDQLHSHEKIHGIAQTLD
CHTCGITFSNLPSLVHHVEAHKRSDLRPSSHLPKKKKGLQLPKTHHCHQCGKSFVTNRRL
KDHVRTHLNYRPFPCSYCGKCFTQKGNLNVHIRIHTGERPYMCSVCGKTFQSAGNLQVHQ
RFHTGEKPYQCKECDKRFTKSSHLVVHMRGHTGERPFTCNECGRSFIRKTCLKKHLLVHS
GQKPYSRPRCPNNSKRSSQPSYHMKENPTNATAMAGHATAMAGHAAAMAGHVAAVAGHVS
VPAIYHDSLNIKMLAHVGMSRGYAMERLGGGPSNC
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgctcactagcaaaggtagctaagatactgattggcacatgggccataatggat
tcccccattccgctctcctctctgcgccttttggttccacctctacggctgatgtctgca
tttatgtggcaggtagcgcaacagagggccatcaagcactatggaaaattagaggagttt
gtgaccgtggtaacacaaactgtcccagaacttatgactgacagacagagaaccctcctt
attttgggtctgagagcaagggtaaaccctgtcagcctccagaccctcctttatagaata
aagtcttctcaacatgcacagtccaatgatgcaggcatggaatcacctgaagctaacttt
gccaagctcacccaaagcttgattatagacccggttgagcgtgaacacttcgtccaagtg
gtgtttcctgaagaattcagacctgattttgaccaagtgcttcaggaactggtctgtgac
ttcctcactcggctggaagagctgcttacactaccagactttaagcagactgcattgttg
ctgagtgctggctcctctggcctagatgaatgcctgcagtctttctctcactcagaagat
ctccagtttctgctccagaattacaaacaatgcagaacattgtacacaaacatttcctcc
tctgacattcctcaggaatcagatattgaatctgatgccttccctgaccagttaaaccgt
accaatctggacactggtgtggggatgaggactgggatacaaagcagagactgccaaagg
atggagttggcatcacatttagtggaaatggggagcacaagagatattataggctgcgat
gaaacctgtgatgaagggaatgaagatgacattgatgtagaggatgacccaacgcagaaa
agggctggttctggtctttctcctaccagtgtcatgcaaggtggtgatacagacaccgtt
gcaggggtgtcgtttcaggtgttgactcccctttcttcagcttcaaatgagtgtgcccca
tctacttccagttcatcacacatggttgtccaccagtgtcctcagtgtgggaagtgcttt
aattatcagtctcaacttgtccaacaccagcaaattcactgtggggataatccatacaag
tgctccaactgcgggaatagattcaaattctttacaagtctgtcaaaccataagaggatg
caatgtgtgggcactgcctttagctgcctgaagtgctggagagagtttggttctctacgt
gagaaattgagacaccagtgtccacacaacgaagtcatgtacatctgtccacagagcggg
aagagtttcaagacgccacagcaacaaccattccagtgccgtcattgcgcaatggccttt
tccgaaatggatcaactgcattctcacgaaaaaattcacggaatcgcccaaactcttgac
tgtcacacatgtggaattaccttcagcaacttgcccagcctcgtgcaccacgtggaagcc
cacaagaggtcggatttgagaccatcgtcgcaccttccaaagaagaagaaaggattgcag
cttccgaaaactcaccattgtcaccaatgtggaaagtcctttgtaacaaaccgacgcctt
aaggatcacgtgcgtactcatttgaattatcgtcccttcccctgctcctactgtggaaaa
tgtttcactcagaaaggtaatctcaatgtgcacataaggatccacacaggggagagaccc
tacatgtgctctgtgtgtgggaagacctttcagtcagcagggaatctgcaggtacaccag
cgctttcacacgggggagaaaccctaccaatgcaaagaatgtgacaaacgttttactaag
tcgagccatttagtcgtccacatgcgtgggcatactggagagcgtcccttcacttgtaat
gaatgtggaaggagttttatccggaaaacttgcttaaagaaacatttgctagttcattca
gggcagaagccttattcacgtcctcgttgcccgaataattccaagcgcagttcacaacca
agctatcacatgaaggagaatcctactaatgcgaccgccatggctggacatgcgaccgcc
atggctggacatgcggctgccatggctggacatgtggccgccgtggctggacatgtgtcc
gtaccagcaatctatcatgacagccttaacataaaaatgttggcacatgttggcatgtcc
cgaggctatgccatggagagactaggaggcggtccttcaaattgttga
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