Salmo trutta (river trout): 115180663
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Entry
115180663 CDS
T08542
Name
(RefSeq) valine--tRNA ligase-like isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115180663
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
stru01007
]
115180663
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stru03016
]
115180663
Enzymes [BR:
stru01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
115180663
Amino acid related enzymes [BR:
stru01007
]
Aminoacyl-tRNA synthetase
Class I (U)
115180663
Transfer RNA biogenesis [BR:
stru03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
115180663
Prokaryotic type
115180663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
GST_C
tRNA-synt_1_2
GST_C_2
Arc1p_N_like
GST_C_3
Val_tRNA-synt_C
tRNA-synt_1e
GST_C_7
Motif
Other DBs
NCBI-GeneID:
115180663
NCBI-ProteinID:
XP_029598762
Ensembl:
ENSSTUG00000014331
LinkDB
All DBs
Position
3:complement(58009452..58025095)
Genome browser
AA seq
1279 aa
AA seq
DB search
MASLYVSPHPDDFRSLMALVAAEFCPSRPCTLIEDPPASLALCSRPSLVLGSGGGEVLSG
ASAVAWYLASQGKRIGSNAKQESQVWQWLSFADNELTPVSCAVVFPLLGVMGVDKKSMQL
QQSSHAEMMRVLNVLDKNLEPRTFLVGDSLTLADIAVATAALLPFKYALEPSNRKALTNV
TRWFLTCVNQPQFVKVLGQISLCEKMVPVTPKPSVAIVPAANANPTADANAANGKPKTEA
QLKKEAKNREKLEKFQKKKEMEEKKKQEKKLAPPTEKKAKPEKKDLGVISYDIPTPPGEK
KDVLSALPDSYSPQYVEAAWYSWWEKQGYFKPEYGRKSISEPNPRGVFMMCIPPPNVTGS
LHLGHALTNAIQDCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMRERGMSRHDLGR
DQFIQEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRLHEDGVIY
RSKRLVNWSCTLNSAISDIEVDKKELTGRTLLPVPGYKDKVEFGVLVSFSYKIEGSDEEV
IVATTRIETMLGDSAVAVHPADPRYQHLKGKMVLHPFCDRKMPIVFDEFVDVNFGTGAVK
ITPAHDHNDYEVGNRHNLAFINILDENGLLINVPAPFLGMKRFEARKAVLQALKDRGQFK
ETKDNPMVVPVCSRSKDIVEPLLKPQWYVDCADMGKQAADSVREGRLKIIPDHHHKTWFN
WLDNIRDWCISRQLWWGHRIPAYFVTVTDPSVKPGEDMDGHYWVSGRTEEAARDKAAKRF
NVSTDKITLRQDEDVLDTWFSSGIFPFSIFGWPNETQDLSVFYPGSLLETGHDILFFWVA
RMVMMGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLYAQLQD
SNLDPVEVEKAKQGQKSDYPTGIPECGTDALRFALCAYTSQGRDINMDVNRILGYRHFCN
KLWNAVKFAMRTLGDNFVPSEKAQLCGEESVSDRWILSRLCSAVGQCNAGFQAYDFPAIT
TAIYNFWLYELCDVYLESVKPVFSRAEEDSGSRSQAVVCRQTLFTCLETGLRLLAPIMPF
VGEELYQRLPRRRSQDGHPSIHVTPYPETEEFCWHSEDVDRQMEFVMTVVRTIRSLRADY
NLTKTRADCYLQCIDSETMSLVEQYSLQIQTLSLSQTIQPVPATGAVPEGCAVAIASDRC
TVHLMLKGLIDLEKEVAKLTVKKGELEKQMDKLREKMDKSDYKEKVPVKVQELDADKLRQ
SQTELEKATEAIDNFKRMV
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgctctacgtctccccccaccctgacgacttcaggagcctcatggccctggtt
gctgcagagttctgcccctctcggccctgcacactcatagaggaccctcctgcctccctg
gccctgtgctctcgccccagcctggtgctgggctctgggggaggtgaggtgctctctggg
gccagtgctgttgcatggtacctagcctctcaggggaagaggatagggtcgaatgctaaa
caggagagccaggtgtggcagtggctcagctttgcagacaatgagctgactcctgtgtcc
tgtgctgtggtgttcccactgctgggggtgatgggagtggacaagaagtccatgcagctt
cagcagagttctcatgctgagatgatgcgcgtgctaaacgttttagataagaacctggag
cctagaacattcctggtgggagacagcctcactctggccgacatcgctgtggcaaccgca
gcactcctgcccttcaaatacgccttggagccgtccaacaggaaagccctgacgaatgtg
accaggtggtttctgacctgtgtcaaccagcctcagtttgtcaaggtcctgggacagatc
tctctgtgtgagaagatggtgcccgtcacacccaaacccagcgttgctattgttcctgct
gctaacgctaatccaactgctgatgccaacgctgccaatggaaaaccgaagacagaagct
cagctgaagaaggaggcgaaaaacagagagaagctggagaagttccaaaagaagaaggag
atggaggagaagaaaaagcaagagaagaaactggcacccccgacagagaaaaaggccaaa
ccagagaagaaggacctgggagtgatctcatacgacatccccacccctcctggagagaaa
aaagatgtcctgagcgccctgccagactcgtacagtcctcagtatgtggaggcagcctgg
tactcctggtgggagaagcagggatacttcaaacctgaatacgggcggaagagtatcagt
gagccgaacccccgtggagtgttcatgatgtgtatccctccgcccaatgtgacgggatct
cttcacttaggccatgccctaaccaacgccatccaggactgtctgaccagatggcaccgc
atgcgtggcgagacgaccctgtggaacccaggctgtgaccacgcgggcatcgccacccag
gtggtggtggagaaaaaactgatgagggagaggggcatgagccgtcacgacctggggaga
gaccagttcatccaggaggtctggaagtggaagaacgagaagggagaccgtatttaccac
cagctgaagaagctgggttcctctctggactgggacagagcctgcttcaccatggaccct
aaactgtcctatgcagtccaggaggcgttcattcgtctgcatgaggacggcgtgatctac
aggagcaagaggctggtcaactggtcctgcaccctcaactctgccatctcagatatagag
gtggataagaaggagctgactggcaggactctgctgcccgtgcctggctacaaggacaag
gtggagtttggagtactggtctccttctcctacaagatagagggatcagatgaggaggtg
attgtggcgaccactcgtatagagaccatgctgggagattctgctgtggccgtccaccct
gccgaccccagataccagcaccttaaagggaagatggtgcttcatcccttctgtgacagg
aagatgcccatcgtgtttgatgagttcgtggatgtcaactttggaacgggtgctgtgaag
atcaccccagcccatgaccataatgattatgaggttggaaacagacacaacctggccttc
atcaacatcctggatgagaatggcctgctcatcaacgtgccggctccattcctgggtatg
aaacgtttcgaagcgaggaaggctgtgctgcaggctctgaaggacagaggccagttcaag
gagaccaaagacaaccccatggtggtgcctgtctgcagtcgttctaaggacatagtggag
ccgctgctgaagcctcagtggtatgtggactgtgctgacatgggcaagcaggcagctgac
tcggtccgggagggaagactcaaaatcatcccagaccaccaccataagacctggttcaac
tggttggacaacatcagggactggtgtatctctcgtcagctgtggtggggtcacaggatc
ccagcctactttgtcaccgtgactgacccttcagtcaaaccaggagaggacatggatggt
cattactgggtgagtgggaggacagaggaggcggccagagataaagctgccaagcgcttc
aacgtttccactgacaagatcaccctcagacaggatgaggatgtcctggatacatggttc
tcctctggtattttccccttctccatcttcggctggcccaacgagacccaggacctgagt
gtgttctatccaggcagcctgctggagacgggtcatgacatcctgttcttctgggtggcc
cgcatggtgatgatgggcctcaaactcactggcaagctgcccttcaaagaggtgtacctc
catgcggtggtgagggacgcccacgggaggaagatgagcaaatctctggggaacgtcatc
gaccctctggacgtcatcacaggcatctctctagagggtctgtacgcccagctgcaggac
agtaatctggacccagtagaggtagagaaggccaagcagggacagaagtcagactacccc
actggtatcccagagtgtggcacagatgccctccgcttcgccctgtgtgcctacaccagc
caaggcagggacattaacatggatgtgaatcgtatccttggttaccgtcacttctgtaac
aagctgtggaatgctgtgaagtttgccatgaggacactgggagacaactttgttccttca
gagaaagcccagctgtgtggggaggagagcgtgtcagaccggtggattctgtcccgtctg
tgttctgctgtggggcagtgtaatgcagggttccaggcctacgacttcccagctatcacc
acagccatctacaacttctggctctatgagctctgtgacgtctatctggagagtgtgaag
ccagtgttctccagggcggaggaagacagtgggtctcggagccaggctgtagtctgcaga
cagactctgttcacctgcctggagaccggcctgcgcctcctagctcccatcatgcccttc
gtgggcgaggagctctaccagaggttgccacggcgacgatcccaggatggccaccctagt
atccatgtcacgccctaccctgagactgaggagttctgctggcacagtgaggatgtggac
cgtcagatggagtttgtgatgaccgtggtccggaccatccgttcactcagggccgactac
aacctgaccaagacacgtgccgattgctacctccagtgtatagacagtgagacgatgtct
ctggtggagcagtacagtctgcagatccagaccctgtctctttcccagaccatccagccc
gtcccagccaccggggccgtcccagagggctgtgctgtggccattgcctccgacaggtgc
accgtccacctcatgctcaaaggcctgatagacttggagaaggaggtggccaagctgact
gtgaagaagggagagctggagaaacagatggataaactgagagaaaagatggataagagt
gactacaaggagaaggtgcctgttaaagtacaggagctggatgctgacaagctgcgtcag
agccagacggagctagagaaagcaacggaagccatagacaacttcaagagaatggtgtaa
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integrated database retrieval system
