Salmo trutta (river trout): 115180880
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Entry
115180880 CDS
T08542
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
115180880 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115180880 (nhej1)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
115180880 (nhej1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
115180880
NCBI-ProteinID:
XP_029598882
Ensembl:
ENSSTUG00000027983
UniProt:
A0A674AYR0
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MERDAVDGDLLDCPWVPVCISGSQLLAKTWFGDTAYRILLTDLHSVWEEEMDTRAIQDRA
QELNRRLRAPVHAFFSHMCEVAQPCLSGRVEDGGEPQFSLNHHGGDINLKLKSELAGVPF
YWEFRCTPAPVALVCSQLVRPLLLMSRLLQRQVGQLGALLARKDTELQDYRDNGAVLSRE
RLQTELFEEQSYRENFLTQTVPQVCARQGSLGFDSELQELYSAVTSYGNTNARKRKISER
HAPEEDQSTTKDRDPNHAASGTQPPGEEVNHGLDQGDKRQTGRGVRARTTDSERPNEEQT
AVPMAAAADRPPARPKKKKAKGLFG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggagagagatgcagtggatggagatctgctggactgtccctgggtaccagtgtgtatc
agtgggtctcagctcctggccaagacctggtttggggacacagcctaccgcatcctgctc
acggacctgcactctgtgtgggaggaggagatggacaccagggccatccaggacagagct
caggagctgaacaggcgattgcgggctcccgtccacgccttcttctctcacatgtgtgag
gtggctcagccctgtctgtctggacgggtggaggacgggggtgagcctcagttctccctc
aaccaccacggcggtgacatcaacctgaagttgaagagtgagctggctggggtgcctttc
tactgggaattccgctgcacccctgcccctgtggctttggtgtgcagtcagcttgtgcgc
cccctgctgttgatgagcaggttactgcagagacaggtgggccaactgggagctctgctg
gccaggaaagacactgagctccaagactacagggacaatggggcagtgctgagcagagag
cgattgcagacagagttgtttgaggaacagagctacagagagaactttctgacacagact
gtgccacaggtatgtgcgaggcagggcagtctggggtttgactctgagctgcaggagctc
tactcagccgtcacgtcctacggcaacaccaacgctcgcaaacgtaagatctctgagaga
cacgcccccgaagaggaccaatccaccacaaaggaccgtgaccctaaccacgccgccagc
ggcacacagcccccaggagaggaggtgaaccatggtctggaccagggggataagaggcag
actggacggggggtccgagccagaaccacagactcagagagacctaatgaggaacagact
gcagttcccatggctgctgccgcagatcggccccccgcgcgacccaagaagaagaaagct
aaggggctttttggatga
DBGET
integrated database retrieval system
