Salmo trutta (river trout): 115180907
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Entry
115180907 CDS
T08542
Name
(RefSeq) DDB1- and CUL4-associated factor 13-like
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stru03009
]
115180907
04121 Ubiquitin system [BR:
stru04121
]
115180907
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
90S particles
Other 90S particles
115180907
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115180907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_RFWD3
ANAPC4_WD40
Beta-prop_IFT140_1st
eIF2A
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
115180907
NCBI-ProteinID:
XP_029598929
Ensembl:
ENSSTUG00000016110
LinkDB
All DBs
Position
3:58201522..58214233
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKVLSRNPDDYVRETKLDIQRVPRNYDPSLHPFEVPREYTRALNATKLERVFAKPFLA
SLDGHRDGVNCMAKHPKSLSTMLSGSCDGELKVWNLTKRECVRTLQAHEGFVRGMVVRFC
GTSFFTVGDDKTIKQWKMETPSYGEEEEPLNTILGKSVFTSIDHHQKEGVFVTCGQQVDI
WDEQRSSPIRSFSWGVDSFSCVRFNPVETELLASCASDRSIVLYDMREATPLKKVIMSMR
SNTLCWNPMEAYNFTCSNEDYNLYTYDMRYLDKPFTVHMDHVSAVLDVDYSPTGKEFVSA
SFDKTIRIFPKDSGHSREVYHTKRMQHVISIKWSSDNKYILSASDEMNIRLWKANAAEKL
GLLAPREKAAVNYSQKLKEKFQHHPQIRRISRHRHLPKSIYSQSKELRVMKEARRRKERN
VRKHSKPGSMPVVTEKEKHVVTVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaagtcctctccaggaatccggacgactatgtccgtgagacgaagttggat
atccagcgtgtaccaagaaattacgacccgtccctccatccattcgaggtgccaagagaa
tacacccgtgccctgaatgccaccaagctggagcgcgtgttcgccaagccgttcctagct
tctctggacggccacagggatggggtgaactgcatggccaagcaccccaagagcctctcc
acaatgctgtccggctcctgcgatggagagctgaaggtgtggaatctaaccaaacgtgag
tgtgttcgtacactccaggcccatgaaggctttgtcagggggatggtcgttcgcttctgt
ggcacctccttctttacggttggtgatgacaagactatcaaacagtggaagatggagact
cccagctacggagaggaagaggaacctctcaatactattcttgggaagtctgtgttcacc
agcatcgaccaccaccagaaggagggtgtgtttgtgacgtgtggccagcaggtggacatc
tgggatgagcagcgcagcagccccatccgctccttctcctggggcgtggacagtttcagc
tgcgtccgcttcaaccctgtagagactgaacttctagcaagttgtgcctctgacagaagt
attgtgctgtatgacatgagggaagctacacctcttaaaaaggttatcatgagtatgagg
agcaacactttgtgctggaatcccatggaagcttataacttcacctgctctaatgaagat
tacaatctgtatacatatgatatgaggtacctggacaagcctttcaccgtccacatggac
catgtctcagccgtgctggatgtagactactctccaactggcaaggagtttgtctccgcc
agctttgacaagaccatccgcatcttccccaaagacagtggccacagcagggaggtgtac
cacaccaagcgcatgcagcacgtcatctccataaagtggtcatcagacaacaagtacatc
ctgagtgcttcagatgagatgaacatcagactgtggaaggccaacgctgctgagaagttg
ggattgctggctcctagggagaaggcagctgtgaactacagccagaagctgaaggagaag
ttccagcaccaccctcagatccgccgcatctcgcgccaccgccacctgcccaagtccatc
tacagccagagcaaggagctgcgtgtcatgaaggaggctcgccgcaggaaggagaggaac
gtacgcaagcacagcaagcctggctccatgcccgtggtgacggagaaagagaaacatgtg
gtcaccgtggtgaaatag
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