Salmo trutta (river trout): 115180980
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Entry
115180980 CDS
T08542
Name
(RefSeq) meckelin-like isoform X1
KO
K19348
meckelin
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115180980
Cilium and associated proteins [BR:
stru03037
]
Primary cilia and associated proteins
MKS complex
115180980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Meckelin
Motif
Other DBs
NCBI-GeneID:
115180980
NCBI-ProteinID:
XP_029598940
Ensembl:
ENSSTUG00000044294
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MATGKLLVCGLALFLTIKSNLLHSQQFTISFQRPSDCGVEQFYDISSQSCVKCGPNQSSS
ATGLSCECVTGFRVLATNGASITCQQCPLEKPAVTEDGYGCILCPGSLTEQGTCQCPSGS
ILVERDVQGNPLEEARCEVCNGAEPALSAPDSYGDRCQRCQASLINTSQSCMCGSNILAG
GLCFPPNNLPTAVNPNVNYAELSLPVQSAWFSTNLYSSAAACLVYTNLTACQALGNMCVM
NMHSFSSVANDACGLYNTIFRATAALGSTQDISYWRANLPWLYYGDQPGLANRVLQTEPL
PTGFSFKGRNRNTDINLVAAVYNARGDFLQWEKVGGNNLQLCPDTARRQEAAYTFGTAYQ
ETCVLSVADLLRVYAEPLFYDVFVDLSRGEDRRLLPLPTRNLNQEYNRKFINRANLNDWY
LSRRVLLVDTLSGREKSLGSLPKVIRIASSIRIGFQLVPGTQKGQVFPPLLSVTYSDVVI
TAPNTQTVSVLFAVEYEMDQTEAHMKTDIALGVLGGVSVLYSLVKTASWKRRIGSPLIDM
ETVLKFLLFYAGDLANVFFFITVGTGLYWLIFYKAQHFVSVLLPLPGLQEERFVAYVGCA
FALKTVQFLHKLIQQLSVDIFFIDWERPRGKANKTIQGNGIGEAKHDPSPVSIWRTYFVA
NEWNEIQTIRKISPTFQIMAVLFLLEVVGFSSLALRDPWSDLQRPPQSYSPPYSLTLRYG
LAATLWLCIGLLQIIFFTAFHERFVEDKIRQFVDLCSISNISVLLLSHRCFGYYIHGRSV
HGHADTNMEEMNINLKREAESLCGQRGLLPNTDTQTFQISITSRLRLQYDRILEPLSRRN
GPSRLVDAASGHPFDQSTKAYHTMNRFLGSVIDHAHRDMEYVVRDKLFFERVIGMEFMEP
MDKSIFYNDESHSFSDVLFYGNEATLLIFDTLFFCVVDLGAQSFILAGVLTYFQQMIFRL
IRNGIGRRNLANKTLVDQRFLI
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggggaagttacttgtgtgcggattggcactatttctaacaataaaatcaaac
ctacttcactcccagcagtttacgatttcgtttcagcgtccttcagactgcggcgtggaa
cagttctacgacatctccagtcagtcctgtgtgaaatgcggtccgaaccagagttcgagt
gcaactggtctgtcttgtgaatgtgtgactgggttcagagttctcgccaccaacggagct
tccatcacctgtcagcagtgtccactagaaaaaccggcagtaacagaggatggctatggg
tgtatcctctgtccgggcagtctgactgagcagggaacctgtcagtgcccgtctgggagt
atactggtggagcgggatgtccaggggaaccctctggaagaggccaggtgtgaggtgtgt
aacggagctgaacctgccctctcagcccctgacagctacggagacaggtgtcagagatgc
caggcttccctcatcaacacctctcagtcctgtatgtgtggttccaacatcctggctgga
ggtttgtgtttccctcccaacaacctccctacagctgtgaacccaaacgtcaactatgcc
gagctgtcccttcctgtgcaatcggcatggttctccacaaacctctactcttcagcagct
gcctgcttggtgtatactaacctgacagcatgccaggcattggggaacatgtgtgtgatg
aacatgcactccttcagcagcgtggccaacgatgcctgtggtctctacaacaccatcttc
agagctaccgcagccctgggatctacacaggacatatcctactggagagccaatctccca
tggctttactacggggaccagccgggtctggccaaccgcgtgctgcagacagagccactt
cccactggattcagcttcaagggacgcaacaggaatacagacatcaacctagtggctgct
gtctacaacgccagaggagacttcctccaatgggagaaagtgggaggaaacaatttgcag
ctctgtccagacaccgccaggagacaggaggcagcttacacctttggcacggcctaccag
gagacttgtgttctctccgtagcagacctgttgcgtgtttatgctgagcctttattctac
gatgtgtttgtggatctgagccgaggagaggacaggagactgctccccctccccacacgc
aacctcaaccaagaatacaacaggaagttcatcaaccgggctaacttgaacgactggtac
ctatcgagacgtgtgttactggtggacactctaagtgggagagagaagagcctcggctct
ctgccaaaagtcatacgcatcgcaagcagcatcaggattgggtttcagctggtgccaggg
actcagaagggacaggtgttccctcctctcctctctgttacctactcagacgtcgtcatc
actgccccaaacacacagactgtctctgtgttgtttgctgtggaatatgagatggaccag
actgaggctcacatgaagactgatatcgccctaggtgtgttgggtggcgtttctgttctg
tattccctggtgaagacagccagctggaagaggaggattggctctcctctcattgacatg
gagaccgtattgaagttcctgttgttttacgctggtgatctggctaacgtcttcttcttc
atcaccgtgggaacaggcctgtactggctcatcttctataaggcccagcattttgtgtca
gtgctgctaccgttaccaggtctgcaggaggagaggtttgtggcgtatgtgggctgtgcc
ttcgctctcaagactgtgcagtttctccataagctgatccagcagttgtcagtggatatc
ttcttcatcgactgggagagaccgcgtggcaaagccaacaagaccatccagggcaatggc
atcggtgaggcgaagcacgatccttctcctgtcagcatctggaggacctactttgtggcc
aacgagtggaatgagattcagaccatacgcaagatcagccccaccttccagatcatggct
gtgcttttcctactggaggtggttggcttctccagtctggcccttagggacccctggtca
gatctccagcgcccccctcagtcctactcccctccctacagcctgacgctgcgctatggc
ctggccgccacactctggctctgcattggactgctgcagatcattttcttcactgcgttc
catgagcgttttgtggaggataagatccgtcagtttgtggacctatgctccatcagcaac
atctcggtgctgctgctgtcccacaggtgttttggttactacatccacgggcgctccgtc
cacggccacgctgacaccaacatggaggagatgaacatcaacctcaagagagaggccgag
tctctgtgtggtcagagaggtctccttcccaacacagacactcagaccttccagatctcc
atcaccagccgcctacgcctgcagtacgaccgcatcctggagcccctcagcaggagaaat
ggaccgtcgcggttggtggacgcagcctcgggacacccctttgaccagagcaccaaagcc
taccacaccatgaaccgtttcctaggatctgtcatagaccatgcccatcgggacatggaa
tacgttgtgagagacaaactgttttttgagagagtcatagggatggagttcatggagcct
atggacaagagcatcttctacaacgatgagtcccattcgttcagtgacgtgctgttctat
gggaacgaagccactctgttgatctttgacacgctcttcttctgtgtggtcgacctggga
gcacagagcttcatactggcaggcgtactcacatacttccagcaaatgatctttcggtta
atccgtaacggtattgggcggagaaacctggccaacaaaacattggtggaccagaggttc
cttatctag
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