Salmo trutta (river trout): 115181020
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Entry
115181020 CDS
T08542
Name
(RefSeq) DNA repair and recombination protein RAD54B-like isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115181020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115181020
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
115181020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
115181020
NCBI-ProteinID:
XP_029599000
Ensembl:
ENSSTUG00000044157
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MRRSGAPSQVFGNMAKKPRFIPPGASLAGPPDPPVGTLLELEPLAPKLALGNVLNKVQRS
LSAPAPPLALPVKAFSLAKSSPQAPGLSRALARVLGAADGKKNELEPEDPSFTEENTGDP
ADVRCSPQSPAGGCGPRVVRAGSGSGAGSDGPRYFSVMWCKASGRKHKRWQGDAVLVTRG
RTATLKDMEGKDIGKGSGYKVSELASLGEGETLMIGAKQVEVMGLISELDYNKGRCFLDV
HVEKEEPKISAPPPTRCPASKPFCRPTLLGGETDRGVAKPQEEGPCKPRHDPLAPGAIVM
PRPSTNHQWAYNKAGLPLVDVVVDPYLTAHLRPHQRDGLLFLYECVMGMRATCRYGAILA
DEMGLGKTLQSVALTWTLLKQGPYGGKPVAKLVLVVAPGSLVQNWGAEFKKWLGRERISV
YTVNQDHRVELFAASPLHSVLVISYEMLLRSLEVVQKLEFGLVICDEGHRLKNSSIKTSS
ALSGLSCTRRVILTGTPVQNDLQEFYAIIEFVNPGILGSSAAYRKVYEEPILRSRQPICT
EEERVLGEERAAELSRLTGLFILRRTQEIINRYLPPRLDWTVFCSPSPLQQELYQALLSH
RVIRACLLGSTQTQTHTHLACITSLKKLCNHPGLLYSAVQERSDGGSAEGSLYEGLRGVF
PESYSSGGFSTADSGKLLVLSDLLTTIRHLSPTDRVVLVSNYTQTLDLLQDLCVHLGYTY
CRLDGNTPTIQRQRLVDNFNSPHSAHFLFLLSSKAGGVGLNLIGASHLVLYDIDWNPAND
IQAMARVWRDGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGAEHTSFSSN
ELRDLFSLTDTPCLTHDLLHCSCSMDGSAPEEGEDKAPASDRPCQLGRQGDRGGAGQKHL
SMSELMQWRHFAGDTHTFRDAYLDHARNHISFAFQSTISHTTQ
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgctcaggggcccccagccaggtctttggtaacatggcaaagaagccccggttc
atccctccaggagcctcactggctggtcctcctgatccccctgtgggtaccctgcttgaa
ctggagcctctggcccctaaactcgccctggggaacgtgctcaacaaggtccagaggagc
ctctcagcccctgcaccgccccttgccctgcctgtgaaggccttcagcctggctaagagc
agcccccaagctccaggcctgtccagagctctagccagggtgctgggtgcagcagatggt
aagaagaatgagctagagcctgaagacccttcctttacagaggagaacactggagaccca
gctgatgtcagatgttccccacagagtccagcaggagggtgtggtccacgtgtggtcagg
gcagggtccggtagcggtgctggttctgatgggccgcggtacttcagtgtgatgtggtgt
aaagccagtgggaggaaacacaaacgctggcagggagacgctgtcctggtgacacgaggg
cgtaccgccacgcttaaagacatggagggcaaggacatcggcaagggtagtggctataag
gtatcagagctggcatcgctgggtgaaggagagaccttgatgataggagctaaacaggtg
gaggtgatgggactcatatcagagctggactacaataagggccgctgtttccttgacgtc
catgtggagaaggaggagcctaagatatcagctcctccccccacacgatgcccagcttcc
aaaccgttctgccgtccgacgctattgggcggagagactgataggggagtggccaagcct
caggaggaggggccctgtaaaccacgccatgaccctctagcaccaggagccattgtcatg
ccccggccctcaaccaatcaccagtgggcgtataacaaggcaggcctcccactggtggat
gtggtggttgacccctacttgaccgctcacctccgaccccaccagcgagacggcttgctg
ttcctctacgagtgtgtcatggggatgagggctacatgtaggtacggtgctatcctggca
gatgagatgggtctgggtaagactctccagagcgtggctttgacgtggacgctgctaaag
cagggcccatacggcgggaagccggttgctaagcttgtgctggtggttgcccccggcagc
ctggtgcagaactggggggcggagtttaagaagtggctcggccgtgagaggatcagcgtc
tacactgttaaccaggaccacagggtggagctgtttgcagcgtctcctctccacagtgta
ttggtgatcagctatgagatgctgctccgctctctggaggtggtacagaagctggagttt
gggctggtgatctgtgatgagggtcacaggttgaagaacagcagcatcaagacttcctct
gccctcagtggtctcagctgtacacgcagagttattctgacaggtactcctgtccagaat
gacctgcaggagttctatgccatcatagagtttgtgaacccgggcattctggggtcgtct
gctgcctacaggaaggtgtatgaggagccaatcctccgctcccgacagcccatctgcact
gaggaggagagagttttgggggaggagcgagcggctgagctctctcgtctgactggtctg
tttattctgaggcggacccaagagatcatcaaccgctacctgccgcctcgtcttgattgg
acagtgttctgtagcccctcccccttgcagcaggaactgtaccaggctctcctctcgcac
cgtgtcatccgagcctgtctactggggtcgacacagacacagactcacacacacctcgcc
tgcatcaccagcctgaaaaagctctgcaaccacccaggactgctctactccgctgtacag
gagcgttctgatggcggctcagcagagggttctctgtatgaagggctaagaggtgtcttt
ccagagtcttactcttctgggggcttcagtacagctgactcagggaaactactggtcctg
tctgacctactgaccactattcgccacctcagccctactgacagggtggtgttggtgtcc
aactacactcagacattagacctactccaggacctgtgtgtccacctgggctacacctac
tgtcgcctggacggcaacacccccaccatccagaggcagcgattggtggacaacttcaac
agccctcactccgcccacttcctcttcctcctgagttctaaagccggaggggtggggctt
aacctgatcggcgcctcccacctggtcctgtacgacatcgactggaaccctgccaacgat
atacaggcaatggcacgagtgtggagagacggacagaagaagactgttcacatctaccgc
ctgctcactgcaggtaccatagaggagcgtatcttccagaggcaggtgtccaaacagggg
ctttctgggacagtggtggacctggggaaaggggcggagcacaccagcttctcctccaat
gagctgcgagatctcttcagcctgacggacacaccctgtctcactcacgacctgctacac
tgcagctgcagtatggacggatcagccccagaagaaggcgaggataaggcgcctgcgtct
gataggccgtgtcagctgggtcgtcaaggtgaccgtggtggggcggggcagaagcatctg
agcatgtcagagctgatgcagtggagacactttgcaggggacacacacaccttcagagat
gcttacctggaccacgcacgaaaccacatctccttcgccttccagtccaccatctcacac
accactcagtaa
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