Salmo trutta (river trout): 115181738
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Entry
115181738 CDS
T08542
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1-like
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04621
NOD-like receptor signaling pathway
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115181738
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115181738
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
stru04054
]
115181738
Pattern recognition receptors [BR:
stru04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115181738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_6
LRR_4
NOD2_WH
AAA_16
AAA_22
NPHP3_N
AAA_30
AAA_18
AAA_29
ATPase
Sigma54_activat
AAA_7
NTPase_1
Motif
Other DBs
NCBI-GeneID:
115181738
NCBI-ProteinID:
XP_029599413
Ensembl:
ENSSTUG00000028440
LinkDB
All DBs
Position
3:59691035..59698759
Genome browser
AA seq
954 aa
AA seq
DB search
MYIMDSSAEEAGAGLTGHVSTVQMLNLHRELLVSQVKSTQCIMDNLLQSGFLCIEDAELI
QRAATKTDQVRKILELVQSKGEQACEYFLYILYKVYDAYIDLQPWLKEINYQPPDFIRDI
PVKNTDPISRYCEKLRHELGRDTRFIASYAQREETLLEELYTDTLMELLNDRNESLGHLE
GLEQLLGEQGVFNSQAETVLITGDAGVGKSILLQKLQRLWSKRELEQADAMFFFKFRCRM
FSTFKETDEISLRDLLFKYNCYPDQDADNEVFSYILRFPEKVLFTFDGYDEIQADLDLVN
EPEVVSPEERTHPLLVLMNLLCGKLLNGSRKVLTARTGTEVQSRVIRKRVALRGFSPAHL
QTYTNLHFKEQEHRDLVSVQLDASPHLCGLCSIPLFCWIVFKSFKHLRSVYDDFELPEAC
VTLTNIFLLLSEVFFSRRATPPPVLLKRNTRCPADTFRAGLRPLTAFSKLALLGMERGGF
VFDQEEVASCGLTEEDLQVGFLRPVSRYDACENPSTFEFLHLTLQSFLAAFSLVLDEQAS
VGNILKFFTECSRRVNTSCLSCVVHCISGSSKPREKDPFKTNEHLQYANLFLCGLLSKTN
AGLLVHMVPAALLKRKRAVLKSYLSTSVRSHLRGLPLYSTEQEGSKVHVLPNFLWMLRCI
FETGSKEVAQLTAKGITADYIKLGYCNVFSGDCSAINFVLQHRRKRLGVDMDNNNISDYG
VKQLRPSFSKMTVVRLCVNQISDSSIEVLAEELIKHRVVEVLGLYNNHITDIGAKLIAHI
IEECPKLRVVKLGSNKFTSVGGRYLASAIQKSSSIFDVGMWGNSIGDEGARAFAEALRNH
PSLTNLSLSANGITSEGGRSLAEALKGNTMLRIFWLVQNELSDDVAPDMAELIRSNTGLS
HLWLINNQLTVGGIRQLSEALSHNTSLKEISLKGNCLSEEEEKLFEAEGRLRFH
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtatattatggactccagtgccgaggaagccggtgctggactaacgggccatgtgtcc
actgtccaaatgctcaacttgcaccgtgagctactggtttctcaggtgaagagcacgcag
tgcattatggataacctcctacaaagtggttttctgtgtatcgaggatgcagaattgatc
cagcgcgcagccaccaagactgaccaggtgcgtaaaatcctggaattggtccaaagcaaa
ggggagcaggcatgtgaatacttcctatatattctctacaaagtttatgatgcatacata
gacctccaaccatggcttaaagagatcaactaccagccaccagacttcatacgggacata
ccagtgaagaacacggaccctattagtaggtactgtgagaagctgaggcacgagctgggc
cgagacacacgcttcattgcctcctacgcccagcgagaggaaaccctgctggaggagctc
tatacagacaccctgatggagctcctgaatgaccgcaatgagagcctgggccacctggag
ggtctggagcagctcctgggagagcagggtgtctttaactcacaggcagagacggtgctc
atcacaggggatgctggggtgggcaagtccatcctccttcagaagctccagaggctgtgg
tccaagagggagctggaacaggcagacgccatgtttttcttcaagttccgctgtaggatg
ttcagcacattcaaggagacagacgagatctcactgagggacctgcttttcaaatacaac
tgctaccccgaccaggatgcggataatgaggtgttcagctacatcctccgcttccctgaa
aaggttctctttacgtttgacggctatgatgagatccaggctgatctggacctggtgaat
gagcctgaggtggtttctccagaggagaggactcacccccttctggtgctcatgaacctg
ctctgtgggaagctgctcaatggttcccggaaggtcctgacggctcggacaggcaccgag
gtccagagcagggtgatccggaagagggtggcgctgcgtgggttctctccggcccacctt
cagacctacaccaacctgcacttcaaggagcaggagcaccgggacctggtctcagtccag
ctggatgccagcccccacctctgtggcctctgctccatccccctcttctgctggatcgtc
ttcaagagctttaaacacctgcgctcagtctatgacgactttgagttgccagaggcttgc
gtgaccctcactaatatattcctcctgctgtctgaagtcttcttcagccggagggccact
cccccacctgtcctcctgaagagaaacaccaggtgccccgctgataccttcagggcaggg
ctgaggccgctgacagccttctccaagctggctctgctgggcatggagagaggaggcttt
gtgttcgaccaggaggaggtggcctcctgtggcctgactgaggaggaccttcaggtgggt
ttcctccgaccggtcagccgctacgatgcctgtgaaaacccttccacctttgagttcctt
cacctcaccctacagtccttcttggctgcattctccctggttctggacgaacaggccagc
gtaggaaacatcctcaagttcttcaccgagtgcagcaggagggtcaacacttcttgttta
tcgtgtgtcgtccactgcatcagtggctcctccaaacccagggaaaaggacccgttcaag
accaacgagcatctccaatatgccaacctcttcctgtgtggactgctgtctaagaccaac
gccggcttgctggtgcacatggttcctgcagcgctactgaagagaaagcgggcggtcctc
aagtcctacctgtccaccagcgtgaggtcccacctccgcggtttgccactctacagcaca
gagcaggagggcagcaaggtgcatgtcctgcccaacttcctgtggatgctgcgctgcatc
ttcgagacaggaagtaaagaggtggcccagctgactgcgaagggcatcacagctgactac
atcaagctgggctactgtaatgtgttctctggcgactgcagtgccatcaactttgtgctg
cagcaccggcggaagaggctaggggtggacatggacaacaacaacatcagtgactatggg
gtcaagcagctcaggccttcattcagtaagatgaccgtggtgagattgtgtgtcaatcag
atctcagacagcagcattgaggtactggctgaggagcttatcaaacacagagtggtggag
gttctgggactttacaataatcacattacggacatcggagccaagctaatcgctcatatc
attgaggaatgtccaaagttaagagttgtcaagcttggcagcaacaagttcaccagtgtg
ggtggcaggtatctggccagtgccattcagaagagctcatctatctttgacgtgggaatg
tgggggaacagcattggtgatgaaggagcaagagcattcgcagaggccctgaggaatcac
ccaagtcttaccaacctcagcctctcagccaatggcatcacttcagaaggtgggaggagc
ttggccgaagcactgaaaggcaacacaatgctcagaatcttctggttggtgcaaaatgag
ttgtcagatgatgtagcaccagacatggcagaactgatcagatccaacacgggtctatct
cacctctggttaatcaataatcagctgacagtgggtggaatcagacagctgtcagaggct
ctctcccacaacacatcactcaaagagatcagtttgaaagggaactgtctttctgaagag
gaagagaagctgtttgaggctgagggaaggctacgcttccactga
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