Salmo trutta (river trout): 115181913
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Entry
115181913 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115181913
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115181913
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
U-box type E3
115181913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
zf-C3HC4_3
zf-CCHC_2
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
115181913
NCBI-ProteinID:
XP_029599462
Ensembl:
ENSSTUG00000021743
LinkDB
All DBs
Position
Unknown
AA seq
1781 aa
AA seq
DB search
MAAGSSRPTDSSPSVSLAQLSKTANLAEANASEDDKIRAMMSQSNSEYDPIHYSKKAVGP
PPAHYTCYRCGKNGHYIKHCPMQMDKSVEAPKPVRTSKGIPQSFMVKAEPGTKGAMLTST
GEYAIPAIDAEAYALGKKERPPFVPREASSSEDEADPIPDELLCPVCNDLMSDAVVIPCC
GNSYCDDCIRTSLLDSEEHTCFTCKQSDVSPDALIANKFLRQAVNNFKNESGYTKPARNK
TLQQSAPPPARPQPFRTLGSRQQDPLLANTRQQDPLLANARQQDPLLANARQQDPLLANA
RQQDPLLANARQQDPLLATARQQDPLLANARQQDPLLANARQQDPLLANARQQDPLLANA
RLQDPLLVNTSRPPASLTPPSVTLTQSLPIQTPPIGPPEVSISPDPTPEPHRAEPRHLAN
HNEPPPPGEMEAGPYMISEPPIRSVDSGPQGYHMPMIGHPPPIRPSHPSGPPPQPSHSLR
GGPRPPWDRPYRPLSDHVPPPRHPPPSAPGPAPHLYPGPNLYHPPPNPHSIPPQSYPPPY
STGPPPPVNYPPQPLYPHGQMPPGVNAPWIPPPNTQPHSLGPPPLLSSGPPLSKEDFYRQ
RRLRQDQVTSKLDEFTKDFAKELMEYRPAPKRRRRSYSRSRSYSRSPFSRSPYSRSRSPR
SRSRSYSYTPSRSRSRSRSYGRSPFSRRNGGRGGRSRSYGRSPRSRSRSRSYGYRRSGSP
RSPPPYRGGGGGGGGGGGWEGGDGAEGGGGGYRPRSRSPGGYRRSRSPGGVRGHHKPPPR
EPPPYEHKGGPDLSPGGRERWERDSYRQWEKEYRDWYNKYYKDYSTQHASVHHRGGRGSR
ERDRLTPPPRDYSPQGRVRRGERGGPPGPHRTHHALSSIPSTSARGDGNKERTQGDTSKE
RTQGGTKTSESGTKTLKAKKLKKKKNGEELDSANQSLDRGDATPVRDEPMDELHTLTPSK
APPTSTKVSTNKAALLSGKTPPTSSSQSEKSRKEKGKVRIKTEGKVKGEKVKRKTGGEAT
VTASKNKESSATKPTKASKVKPDELIKRERGRSTPTVRGGMAKLPLPRPLPPHPHDLPKH
LGDARGGRRDPIHSVGVRPPGRPLQPTPPSPAEKRRRVEERERGRGMDRGMGGPPAKLRR
AEGPYLQRGLPAKPPLLLNLACRETGRGEGLLPIPGTSQTGRLDRFHPISISIPGPGSSM
DLGREGRGDGLLPTPGSSEAGRRESDRGSIWPLMGLQVKPFPQRRIKLNRDLGRNSSMSR
PEERPAPATNITTTTITSTGERPAAPERGGAERDGGMERVAVMVERRSSGERSEVRSVRS
ERPSSGERLPERGEGGGGGRSVSLDRMTIAERSAIVKKPDVTRERTESEYTPPTERERPA
ESSKERERPASAKTDRSSSRERSATREQKGERREKASSSVDRPASTGERAAGTQRETVAE
DRAAVVKEGSGKTRKISRKSSEPTVHHSSDHSVTSTGSSRAVEERSEPGQSQGAVSKPRD
LQTQRRPSPVQFPSPGRERDRGTGGVLIQPPPRSKWEREEEEEEEQHSGSRENGALAVSS
SMPRDALRREVSPAPPSGQGREMQGSVSKTANTEGKRGREEGTRRREEGRGLKKGQVNFR
KPAKTESRGVKEEGRGGVGREESRGTGPEPRRQRLCSDLGRETDEAAFVPDYSEGEGSDG
ERGSGLSHSPSHNTQSPASQSPGGSPSNHSGSTATDKKKKKKHKKHKKHKKHKKHSADAE
PPTEGRKEHKHKNKKKKHRKNKEEEGGGEAEEKTGQESATI
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggatcctcgagacccaccgactcttcaccgtccgtctccctggcccagctc
tctaagactgccaaccttgcggaggccaatgcatcagaggatgacaagatcagagccatg
atgtcccagtccaacagtgaatatgaccccatacattactctaagaaggccgtcggaccg
cctcctgcacactacacctgctatcgctgtggcaagaacggacactacatcaaacactgc
ccaatgcagatggataagagtgtcgaggctcctaagccagtcaggaccagtaaagggatc
cctcagagctttatggtgaaggctgaaccaggaactaaaggagccatgttgaccagcact
ggagaatacgctattcctgctatagacgcggaggcctatgctctgggtaagaaggagcgt
ccaccctttgttcctcgtgaagcgtcatcgtctgaagatgaggctgatccaatccctgat
gagctgctctgccccgtctgtaacgacctgatgagtgatgctgtagtcataccctgctgt
ggtaactcctactgtgatgactgtatcaggactagtctgctggactcagaggaacacacc
tgtttcacctgcaaacagtctgacgtctcacctgacgctctcatcgctaacaagttccta
cgacaggcagtgaataactttaagaatgagtctggttacaccaaaccagcacgaaacaaa
accctgcagcagtctgccccgcccccagcacggcctcagccattcagaaccctcggctca
cgccagcaggaccctctattggccaacactcgccagcaggaccccctattggccaacgct
cgccagcaggaccccctattggccaacgctcgccagcaggaccccctattggccaacgct
cgccagcaggaccccctattggccaacgctcgccagcaggaccccctattggccaccgct
cgccagcaggaccccctattggccaacgctcgccagcaggaccccctattggccaacgct
cgccagcaggaccccctattggccaacgctcgccagcaggaccccctattggccaacgct
cgcctgcaggaccccctattggttaacacctctcgccccccagcctccctcactcctcct
tctgtcaccctgacacaaagcctgcccattcagactccaccgattggaccgcctgaggtg
tcaatctctcctgaccccacccctgaaccacaccgggcagagccacggcacttggccaat
cacaacgagccaccgccgccaggtgagatggaggcgggtccttacatgatatcagagcca
ccaatcagatcagtcgacagcggacctcagggataccacatgcctatgattggtcaccct
ccacccataaggccctcccacccatcaggtccacctccacagccctcccattccctcaga
ggaggacccagaccaccttgggacagaccctacagacctctttctgaccacgtccccccc
cctcgccatccccctccttctgccccgggcccagcccctcacctctacccgggccctaac
ctctaccaccctccccccaacccccactccatcccgccccagtcctacccccctccctac
tccaccggaccccctccccctgttaactaccccccccagcccctctacccacacggccag
atgcctccgggggttaatgccccctggattccccctcccaacacccagccccactcgctg
ggccccccgcccctcctatcctccggaccccccctctccaaggaggacttctacagacag
aggagactccgacaggaccaggtaacgtccaagctggatgagttcactaaagactttgcc
aaagagctgatggaatacagacctgctcccaagagacggagacgctcctactccaggtct
cgttcctacagtcgttctccattcagccgttccccctactcccgatcccgttctcctcgc
tcccgctccaggtcttactcgtacacccccagccgctcccgctcacgttccaggtcttac
ggacgctcccccttctccagacgcaacggaggccggggaggacgcagccgctcctacggc
cgctcgccacggtcccgctcacgctcccgttcctacggctaccgtcgctccggctctcct
cgctcccctccgccttaccgaggtggtggtggtggtggtggtggtggggggggctgggaa
ggaggagacggagctgaaggaggaggaggggggtatcggcccaggtctcgctccccgggg
ggctacaggaggagcaggagtccaggaggggttagaggtcaccataagcccccccctcga
gagccgcccccttacgagcataaaggtggacctgacctgtctcccgggggcagggagcgc
tgggagagagacagctacagacagtgggagaaagagtacagggactggtacaacaagtac
tacaaagactacagtacccagcatgcctcagtgcaccaccgcggtggccggggcagcaga
gagagggaccgcctcacccctccacccagagactactccccccaggggcgggtgaggaga
ggtgagagagggggacctcccggaccccacagaactcaccacgccttgtcctctataccc
tccacctccgccaggggggatggaaataaggagcgcacacagggggacactagtaaagag
cgcacacaggggggaaccaaaacgtcagagagcggaactaaaactctgaaagcgaagaaa
ctgaagaagaagaagaacggggaggagctggattcagccaaccaatcactggacagaggt
gatgccacacccgtcagggacgagccaatggatgaactccacaccctgacccctagcaaa
gccccacccacctccaccaaggtctcgaccaataaggcagcgctgctgtctggtaaaacc
cctcccacctcgtccagccaatcggagaagagcaggaaggagaagggtaaggtgagaata
aagacggaaggcaaggtgaaaggagagaaggttaagagaaagacaggaggagaggcgacg
gtcacagcctcaaagaacaaagagtcttcagccactaaaccaaccaaagcatcgaaggtc
aaaccagacgagctaatcaagagagagagggggcggagcacccctactgttagaggaggt
atggctaaactccccctgccccgccccctcccccctcacccccacgacctccctaaacac
ctgggcgacgcccgtgggggaaggagagatcccattcacagtgtcggggtacgcccccct
ggtcgccccctccagcctacacctccctccccagcagagaagaggaggagagtggaggag
agggaaagggggagggggatggacagagggatggggggccccccggctaagctccgccgg
gccgagggtccgtacctccagagaggacttccagccaagcctcccctcctcctgaacctg
gcatgcagagagacgggtagaggagagggtctgctccccatccctggtacctcacagaca
gggaggctagaccgtttccatcccatctccatctccatccctgggcctggttcctccatg
gacctggggagagaggggagaggcgacgggctgctgcccaccccagggagctctgaggca
ggcagaagagagagtgacagggggtctatctggcctctcatgggtctgcaggtcaaaccc
ttcccccagaggagaatcaaactgaacagagacctggggaggaacagcagtatgtcccgc
ccagaggagagaccagctccagctactaatatcaccactactactattacctctactgga
gagagacctgctgctcctgagagaggaggagcagagagagatggagggatggagagggtg
gcggtgatggtggagcggaggtcgtctggcgagaggtcagaggtcaggtctgttaggtca
gagaggccgtcgtcaggggaacgtttgccagagagaggagaaggtggaggaggaggaagg
tcggtctctctagaccgcatgaccatcgcggaacgctcggccatcgttaagaaacctgat
gtcaccagggagagaacagagagcgagtacactccgcccactgagagggagagaccagct
gagagctccaaggagagagagaggccagcatcagccaagacagacaggtcatcatcccgg
gagaggtcagccaccagggaacagaaaggagagagaagagagaaggcctcgtcctccgta
gacagacctgcctctacaggagagagagctgcagggacccagagagagactgtagctgaa
gacagagcagcagtggtgaaggagggttctgggaagaccagaaagatcagcagaaagagt
tctgagcccacggtccaccactcatcagaccactctgtcacttcaactggcagcagcagg
gctgtagaggagaggtctgagccgggccagagccagggtgctgtgtctaaaccccgggac
ctccagacccagaggagacccagtcccgtccagttccccagcccaggcagggagagggac
cgtgggaccggaggagtcctcatccagccaccaccccggtccaagtgggagagagaggag
gaggaggaagaggagcagcactcagggtccagggagaacggggcgttggcggtttcctcc
tccatgcccagagacgctctgaggagagaagtctcaccagcaccacctagtggccaaggc
agggagatgcagggtagtgtctctaaaacagccaacacagaggggaagagagggagggag
gaggggactagaaggagggaggaaggcagagggcttaaaaagggacaggtgaactttaga
aaaccagctaagaccgaatccagaggggtgaaggaggaaggaagaggaggggtagggagg
gaggagagtcgagggacggggccagagccaaggcgacagcgtctgtgttctgacctgggt
agagagacggacgaggcagccttcgtccccgactacagtgaaggggaggggtcagacggg
gagagaggcagtggcctgagccatagcccctcccacaacacccagagccccgcctcccag
agccccggcggctcccctagcaaccacagcggctccaccgcgacggacaagaagaagaag
aagaaacacaagaaacataaaaaacacaagaagcacaagaagcattctgccgacgctgag
cctcccaccgaaggaaggaaggaacacaaacacaagaacaagaagaagaagcacaggaag
aataaagaggaggagggaggaggggaggcagaggagaagactggtcaggagtcagccacc
atctga
DBGET
integrated database retrieval system
