Salmo trutta (river trout): 115182072
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Entry
115182072 CDS
T08542
Name
(RefSeq) nuclear pore complex protein Nup107-like isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115182072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115182072
03036 Chromosome and associated proteins [BR:
stru03036
]
115182072
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115182072
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115182072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
WH_MCM3_C
Motif
Other DBs
NCBI-GeneID:
115182072
NCBI-ProteinID:
XP_029599581
Ensembl:
ENSSTUG00000026723
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MDWDQNELLSPIVRDAEVTRAARRKSSVQKKAQFNFLSPRDDNQGSTTTPARSLLCHTPG
SLFKQSFTPKTAARNPDVSAILATGRRTPRFIHTPRAPLGSMSMNLDDSDWTNSLYPSPL
SGLGLGDTSFTDDINMSSVMLKEEDPGEAASVSLFSEFLQSYLRHSSTAVFDLLEEYEAI
CQDKVGMLQRLVSRAAPGQQKSSKTAGMRWLLQQEMVTWRLITSLYRDRIQSELEDDIMV
DVAAPGVSEKVVMEQLFQRDAVVRQSQLVVDWLESIAKDEIGDFSDNIEYYAKSVYWENT
LHVLKLRRNTSSTGYNVPLVTELDPDAPVRQRRPLADLDREDDARLLKYLFTLLRAGMTD
EAQRLCKRCGQAWRAATLEGWKLYHDPNINGGGAELLPVEGNPQRCVWKVCCWRMADNEH
FSRYERAIYAVLSGNLKRLLPVCESWEDSVWAYFRVLVDSLVEQEVRSSGMGSEELEELP
REYLEANWTLEKVFEELLATESKKVLEETKEHYHIIQKLVILGDLDGLLEEFSNWLTRSP
ALPSHLLRFMTHLLLFYRSLGMQLKEEVSVDVLKAYISLLMKEKHVDLIAFYVSHLPPDL
ATAQYALFLEEVTEAEQRQRCLELAREAGLDVAAVTKMVVENIRERDTEEFAHHDLTPAL
DTGTSAEDQRKIDVIDWLVFDPAQRAEALKQSNAIMRKFLACKKHHAAKVVFAKVPEDSM
REIYRQWEELGLDTPLPAEDENAIREHLCVRAYLEAHEAFNEWFHHMNSPPQKPSLPAQA
KFTEKVAYEMKENEYQLEHDSWTGRLEALTEDVKERIYNVLLFVDGGWMVDVREDTEEDP
ERGHQMVLLRRLCLPMMSFLLQTVLQRTQRHQESLRLADVIASDQHRLYEVFSKDELRKF
LQKMRESSLLLLDKGLDPLGYEIQP
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggactgggaccagaatgagttgctgtcgcctattgtacgggatgctgaagtgaccaga
gcagcacgccgaaagagttcagttcagaagaaggctcaattcaacttcctttctcctcgt
gatgacaaccaaggtagtaccaccacacctgcccggtccctgctctgccacacacctgga
tccctcttcaaacagtccttcaccccgaagactgctgctaggaacccagatgtgtcagcc
atcttggcgacagggcgcaggactcctcgtttcatccatacaccacgagctcccctgggc
agtatgagcatgaacctggatgacagtgactggacgaacagcctgtacccgtctcctctg
tccgggctgggactgggggacaccagctttactgacgacatcaacatgtcctctgtaatg
ctgaaggaggaggatcctggagaggctgcgtcagtcagtctgttctcagagttcctccag
tcctatctcagacactcctccactgctgtctttgacctgctggaggagtatgaagccatc
tgtcaagataaggtgggcatgctccagaggctggtatcgagggcagcaccaggacaacag
aagtcctctaagactgctggtatgagatggcttttacagcaggagatggtcacctggcgc
ctcatcacttccctatacagagacaggatccagtcagagctggaggatgacatcatggtg
gatgtggctgctcccggtgttagtgagaaggtggtgatggaacaactcttccagagagat
gctgtagtacgccagagtcagctggttgtggattggttagagagtatcgccaaagatgaa
atcggggacttctctgacaacattgaatactatgccaagtctgtctactgggagaatacc
cttcatgttctgaaactgaggagaaacacatccagcacaggctacaatgttcccctggtt
actgagctggaccctgacgcccccgtcagacagagacgtcctctggcagacctggacaga
gaggatgatgccagattgctgaagtacctgttcaccctcctccgagcgggcatgactgac
gaggcccagaggctgtgtaagcgctgtggccaggcatggagagctgctactctggagggg
tggaagctgtaccacgaccccaacatcaacggaggcggtgcagagctgctaccggtggag
gggaaccctcagcgctgtgtatggaaggtgtgctgctggaggatggctgataatgaacac
ttcagcagatatgagagagccatctacgctgttctgagtgggaacctcaaacggctgctc
ccagtgtgtgagtcgtgggaggacagtgtatgggcctacttcagggtcctggtagactct
ctggtggaacaggaggtccggtcctcaggaatgggcagcgaggagctggaggagctgcca
cgagaatacctggaggccaactggacactagagaaggtgtttgaggagctgctggcaaca
gagtcaaagaaagtcctggaagagactaaagaacattaccacatcatccagaagttagtc
atcctgggtgacctggacggtctgttggaggagttcagtaactggttgaccaggagtcct
gctctgccctctcacctgctgcgcttcatgactcacctgctgttgttctaccgcagcctg
ggcatgcagctcaaggaggaggtatcggtggatgtcctgaaggcctacatctctctgttg
atgaaggagaagcacgttgatctgatagccttctatgtcagtcacctgccgccagacctg
gctaccgcccagtacgctctcttcctggaggaggtcaccgaggctgagcagagacaacgc
tgtctggagctggccagggaggcaggtctggacgtggcagcggtcactaagatggtggtg
gagaacatcagagagagagacactgaggagttcgctcatcatgacctcacccctgcactg
gacactggcacctcagcggaggaccagaggaagatcgatgtgattgattggctggtgttt
gaccccgcccagagagctgaggccctcaaacagagcaacgccatcatgaggaagttcctg
gcctgtaagaaacaccatgcagctaaggtggtgttcgctaaggtccccgaggactccatg
agggagatataccgccagtgggaggagctaggcctggacacgccccttcccgcggaggat
gagaacgccatcagggaacacctgtgtgtccgcgcttacctggaagctcatgaggcgttt
aatgagtggttccatcacatgaactccccccctcagaagcccagcctgccggcccaggcc
aagttcactgagaaggtggcctacgagatgaaggagaacgagtaccagctggaacatgac
agctggaccggccgtctggaggctctgactgaagacgtgaaggagagaatctacaacgtc
ctgctgtttgtggacggaggctggatggtcgacgtcagagaggatacggaggaggaccca
gagagaggtcaccagatggtgctgctccgtagactctgtctgcccatgatgtccttcctg
ttgcagacagtactgcagagaacacaacgtcaccaggagagtctcagactggctgacgtc
atcgcctcagaccaacaccgtctctacgaggtgttctccaaggatgagctgaggaagttc
cttcagaagatgagggagtcgtctcttctcttattggataagggtctggacccgctgggg
tacgagatccaaccatag
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integrated database retrieval system
