Salmo trutta (river trout): 115182210
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Entry
115182210 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115182210
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115182210
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
U-box type E3
115182210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
U-box
zf-C3HC4_3
zf-CCHC_2
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
115182210
NCBI-ProteinID:
XP_029599688
Ensembl:
ENSSTUG00000027186
LinkDB
All DBs
Position
Unknown
AA seq
1885 aa
AA seq
DB search
MSCVHYKFSSKLDYNTVTFDGLHITLAELKRQIMGRERLKATDCDLQITNAQTREEYTDE
EVHIPKHSSVIVRRTPIGGVKPAGRTFIVDRSDMAAGSSRPTDSSPSVSLAQLSKTANLA
EANASEDDKIRAMMSQSNSEYDPIHYSKKAVGPPPAHYTCYRCGKNGHYIKHCPMQMDKS
VEAPKPVRTSKGIPQSFMVKAEPGTKGAMLTSTGEYAIPAIDAEAYALGKKERPPFVPRE
ASSSEDEADPIPDELLCPVCNDLMSDAVVIPCCGNSYCDDCIRTSLLDSEEHTCFTCKQS
DVSPDALIANKFLRQAVNNFKNESGYTKPARNKTLQQSAPPPARPQPFRTLGSRQQDPLL
ANTRQQDPLLANARQQDPLLANARQQDPLLANARQQDPLLANARQQDPLSANARQQDPLL
ANARQQDPLLANARQQDPLLANARQQDPLLANARLQDPLLANARQQDPLLVNTSRPPASL
TPPSVTLTQSLPIQTPPIGPPEVSISPDPTPEPHRAEPRHLANHNEPPPPGEMEAGPYMI
SEPPIRSVDSGPQGYHMPMIGHPPPIRPSHPSGPPPQPSHSLRGGPRPPWDRPYRPLSDH
VPPPRHPPPSAPGPAPHLYPGPNLYHPPPNPHSIPPQSYPPPYSTGPPPPVNYPPQPLYP
HGQMPPGVNAPWIPPPNTQPHSLGPPPLLSSGPPLSKEDFYRQRRLRQDQVTSKLDEFTK
DFAKELMEYRPAPKRRRRSYSRSRSYSRSPFSRSPYSRSRSPRSRSRSYSYTPSRSRSRS
RSYGRSPFSRRNGGRGGRSRSYGRSPRSRSRSRSYGYRRSGSPRSPPPYRGGGGGGGGGG
GGGWEGGDGAEGGGGYRPRSRSPGGYRRSRSPGGVRGHHKPPPREPPPYEHKGGPDLSPG
GRERWERDSYRQWEKEYRDWYNKYYKDYSTQHASVHHRGGRGSRERDRLTPPPRDYSPQG
RVRRGERGGPPGPHRTHHALSSIPSTSARGDGNKERTQGDTSKERTQGGTKTSESGTKTL
KAKKLKKKKNGEELDSANQSLDRGDATPVRDEPMDELHTLTPSKAPPTSTKVSTNKAALL
SGKTPPTSSSQSEKSRKEKGKVRIKTEGKVKGEKVKRKTGGEATVTASKNKESSATKPTK
ASKVKPDELIKRERGRSTPAVRGGMAKLPLPRPLPPHPHDLPKHLGDARGGRRDPIHSVG
VRPPGRPLQPTPPSPAEKRRRVEERERGRGMDRGMGGPPAKLRRAEGPYLQRGLPAKPPL
LLNLACRETGRGEGLLPIPGTSQTGRLDRFHPISISIPGPGSSMDLGREGRGDGLLPTPG
SSEAGRRESDRGSIWPLMGLQVKPFPQRRIKLNRDLGRNSSMSRPEERPAPATNITTTTI
TSTGERPAAPERGGAERDGGMERVAVMVERRSSGERSEVRSVRSERPSSGERLPERGEGG
GGGRSVSLDRMTIAERSAIVKKPDVTRERTESEYTPPTERERPAESSKERERPASAKTDR
SSSRERSATREQKGERREKASSSVDRPASTGERAAGTQRETVAEDRAAVVKEGSGKTRKI
SRKSSEPTVHHSSDHSVTSTGSSRAVEERSEPGQSQGAVSKPRDLQTQRRPSPVQFPSPG
RERDRGTGGVLIQPPPRSKWEREEEEEEEQHSGSRENGALAVSSSMPRDALRREVSPAPP
SGQGREMQGSVSKTANTEGKRGREEGTRRREEGRGLKKGQVNFRKPAKTESRGVKEEGRG
GVGREESRGTGPEPRRQRLCSDLGRETDEAAFVPDYSEGEGSDGERGSGLSHSPSHNTQS
PASQSPGGSPSNHSGSTATDKKKKKKHKKHKKHKKHKKHSADAEPPTEGRKEHKHKNKKK
KHRKNKEEEGGGEAEEKTGQESATI
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtgttcattataaattctcgtccaaattggactacaacaccgtgacctttgac
gggctgcacatcaccctagccgagctgaaacggcagattatgggcagagagcgcctcaaa
gccaccgactgtgacctacagatcaccaacgcacagacccgtgaagagtacactgatgag
gaggttcacatccccaaacattcatcagtgatcgtcagacgcacccccatcggaggggtc
aaaccagcaggcagaacgttcattgttgaccgttctgacatggctgctggatcctcgaga
cccaccgactcttcaccgtccgtctccctggcccagctctctaagactgccaaccttgcg
gaggccaatgcatcagaggatgacaagatcagagccatgatgtcccagtccaacagtgaa
tatgaccccatacattactctaagaaggccgtcggaccgcctcctgcacactacacctgc
tatcgctgtggcaagaacggacactacatcaaacactgcccaatgcagatggataagagt
gtcgaggctcctaagccagtcaggaccagtaaagggatccctcagagctttatggtgaag
gctgaaccaggaactaaaggagccatgttgaccagcactggagaatacgctattcctgct
atagacgcggaggcctatgctctgggtaagaaggagcgtccaccctttgttcctcgtgaa
gcgtcatcgtctgaagatgaggctgatccaatccctgatgagctgctctgccccgtctgt
aacgacctgatgagtgatgctgtagtcataccctgctgtggtaactcctactgtgatgac
tgtatcaggactagtctgctggactcagaggaacacacctgtttcacctgcaaacagtct
gacgtctcacctgacgctctcatcgctaacaagttcctacgacaggcagtgaataacttt
aagaatgagtctggttacaccaaaccagcacgaaacaaaaccctgcagcagtctgccccg
cccccagcacggcctcagccattcagaaccctcggctcacgccagcaggaccctctattg
gccaacactcgccagcaggaccccctattggccaacgctcgccagcaggaccccctattg
gccaacgctcgccagcaggaccccctattggccaacgctcgccagcaggaccccctattg
gccaacgctcgccagcaggaccccctatcggccaacgctcgccagcaggaccccctattg
gccaacgctcgccagcaggaccccctattggccaacgctcgccagcaggaccccctattg
gccaacgctcgccagcaggaccccctattggccaacgctcgcctgcaggaccccctattg
gccaacgctcgccagcaggaccccctattggttaacacctctcgccccccagcctccctc
actcctccttctgtcaccctgacacaaagcctgcccattcagactccaccgattggaccg
cctgaggtgtcaatctctcctgaccccacccctgaaccacaccgggcagagccacggcac
ttggccaatcacaacgagccaccgccgccaggtgagatggaggcgggtccttacatgata
tcagagccaccaatcagatcagtcgacagcggacctcagggataccacatgcctatgatt
ggtcaccctccacccataaggccctcccacccatcaggtccacctccacagccctcccat
tccctcagaggaggacccagaccaccttgggacagaccctacagacctctttctgaccac
gtccccccccctcgccatccccctccttctgccccgggcccagcccctcacctctacccg
ggccctaacctctaccaccctccccccaacccccactccatcccgccccagtcctacccc
cctccctactccaccggaccccctccccctgttaactaccccccccagcccctctaccca
cacggccagatgcctccgggggttaatgccccctggattccccctcccaacacccagccc
cactcgctgggccccccgcccctcctatcctccggaccccccctctccaaggaggacttc
tacagacagaggagactccgacaggaccaggtaacgtccaagctggatgagttcactaaa
gactttgccaaagagctgatggaatacagacctgctcccaagagacggagacgctcctac
tccaggtctcgttcctacagtcgttctccattcagccgttccccctactcccgatcacgt
tctcctcgctcccgctccaggtcttactcgtacacccccagccgctcccgctcacgttcc
aggtcttacggacgctcccccttctccagacgcaacggaggccggggaggacgcagccgc
tcctacggccgctcgccacggtcccgctcacgctcccgttcctacggctaccgtcgctcc
ggctctcctcgctcccctccgccttaccgaggtggtggtggtggtggtggtggtggtggt
ggggggggctgggaaggaggagacggagctgaaggaggaggggggtatcggcccaggtct
cgctccccggggggctacaggaggagcaggagtccaggaggggttagaggtcaccataag
cccccccctcgagagccgcccccttacgagcataaaggtggacctgacctgtctcccggg
ggcagggagcgctgggagagagacagctacagacagtgggagaaagagtacagggactgg
tacaacaagtactacaaagactacagtacccagcatgcctcagtgcaccaccgcggtggc
cggggcagcagagagagggaccgcctcacccctccacccagagactactccccccagggg
cgggtgaggagaggtgagagagggggacctcccggaccccacagaactcaccacgccttg
tcctctataccctccacctccgccaggggggatggaaataaggagcgcacacagggggac
actagtaaagagcgcacacaggggggaaccaaaacgtcagagagcggaactaaaactctg
aaagcgaagaaactgaagaagaagaagaacggggaggagctggattcagccaaccaatca
ctggacagaggtgatgccacacccgtcagggacgagccaatggatgaactccacaccctg
acccctagcaaagccccacccacctccaccaaggtctcgaccaataaggcagcgctgctg
tctggtaaaacccctcccacctcgtccagccaatcggagaagagcaggaaggagaagggt
aaggtgagaataaagacggaaggcaaggtgaaaggagagaaggttaagagaaagacagga
ggagaggcgacggtcacagcctcaaagaacaaagagtcttcagccactaaaccaaccaaa
gcatcgaaggtcaaaccagacgagctaatcaagagagagagggggcggagcacccctgct
gttagaggaggtatggctaaactccccctgccccgccccctcccccctcacccccacgac
ctccctaaacacctgggcgacgcccgcgggggaaggagagatcccattcacagtgtcggg
gtacgcccccctggtcgccccctccagcctacacctccctccccagcagagaagaggagg
agagtggaggagagggaaagggggagggggatggacagagggatggggggccccccggct
aagctccgccgggccgagggtccgtacctccagagaggacttccagccaagcctcccctc
ctcctgaacctggcatgcagagagacgggtagaggagagggtctgctccccatccctggt
acctcacagacagggaggctagaccgtttccatcccatctccatctccatccctgggcct
ggttcctccatggacctggggagagaggggagaggcgacgggctgctgcccaccccaggg
agctctgaggcaggcagaagagagagtgacagggggtctatctggcctctcatgggtctg
caggtcaaacccttcccccagaggagaatcaaactgaacagagacctggggaggaacagc
agtatgtcccgcccagaggagagaccagctccagctactaatatcaccactactactatt
acctctactggagagagacctgctgctcctgagagaggaggagcagagagagatggaggg
atggagagggtggcggtgatggtggagcggaggtcgtctggcgagaggtcagaggtcagg
tctgttaggtcagagaggccgtcgtcaggggaacgtttgccagagagaggagaaggtgga
ggaggaggaaggtcggtctctctagaccgcatgaccatcgcggaacgctcggccatcgtt
aagaaacctgatgtcaccagggagagaacagagagcgagtacactccgcccactgagagg
gagagaccagctgagagctccaaggagagagagaggccagcatcagccaagacagacagg
tcatcatcccgggagaggtcagccaccagggaacagaaaggagagagaagagagaaggcc
tcgtcctccgtagacagacctgcctctacaggagagagagctgcagggacccagagagag
actgtagctgaagacagagcagcagtggtgaaggagggttctgggaagaccagaaagatc
agcagaaagagttctgagcccacggtccaccactcatcagaccactctgtcacttcaact
ggcagcagcagggctgtagaggagaggtctgagccgggccagagccagggtgctgtgtct
aaaccccgggacctccagacccagaggagacccagtcccgtccagttccccagcccaggc
agggagagggaccgtgggaccggaggagtcctcatccagccaccaccccggtccaagtgg
gagagagaggaggaggaggaagaggagcagcactcagggtccagggagaacggggcgttg
gcggtttcctcctccatgcccagagacgctctgaggagagaagtctcaccagcaccacct
agtggccaaggcagggagatgcagggtagtgtctctaaaacagccaacacagaggggaag
agagggagggaggaggggactagaaggagggaggaaggcagagggcttaaaaagggacag
gtgaactttagaaaaccagctaagaccgaatccagaggggtgaaggaggaaggaagagga
ggggtagggagggaggagagtcgagggacggggccagagccaaggcgacagcgtctgtgt
tctgacctgggtagagagacggacgaggcagccttcgtccccgactacagtgaaggggag
gggtcagacggggagagaggcagtggcctgagccatagcccctcccacaacacccagagc
cccgcctcccagagccccggcggctcccctagcaaccacagcggctccaccgcgacggac
aagaagaagaagaagaaacacaagaaacataaaaaacacaagaagcacaagaagcattct
gccgacgctgagcctcccaccgaaggaaggaaggaacacaaacacaagaacaagaagaag
aagcacaggaagaataaagaggaggagggaggaggggaggcagaggagaagactggtcag
gagtcagccaccatctga
DBGET
integrated database retrieval system
