Salmo trutta (river trout): 115182237
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Entry
115182237 CDS
T08542
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
115182237 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115182237 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115182237 (esr1)
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
115182237 (esr1)
Nuclear receptors [BR:
stru03310
]
3. Estrogen like
3A. Estrogen receptor
115182237 (esr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Oest_recep
Motif
Other DBs
NCBI-GeneID:
115182237
NCBI-ProteinID:
XP_029599750
Ensembl:
ENSSTUG00000018990
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Position
1:21376507..21403417
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AA seq
618 aa
AA seq
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MLVRQSHTQISKPLGVPLRSRTTLESHAISPPKLSPQQPTTPNSNMYPEEKRGGGGAAAF
NYLDGGYDYTAPAQGPAPLYYSTTPQDAHGPPSDGSMQSLGSSPTGPLVFVSSSPQLSPF
LHPPGHHGLPSQSYYLETSSTPLYRSSVVTNQLSASEEKLCIASDRQQSYTAAGSGVRVF
EMANETRYCAVCSDFASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTMDRNRRKS
CQACRLRKCYEVGMVKGGLRKDRGGRVLRKDKRYCGPAGDREKPYGDLEHRTAPPQDGGR
NSSSSLSGGGGWCGPRITMPPEQVLFLLQGAEPPALCSRQKVARPYTEVTMMTLLTSMAD
KELVHMIAWAKKVPGFQELSLHDQVQLLESSWLEVLMIGLIWRSIHCPGKLIFAQDLILD
RSEGDCVEGMAEIFDMLLATVSRFRMLKLKPEEFVCLKAIILLNSGAFSFCSNSVESLHN
SSAVESMLDNITDALIHHISHSGASVQQQPRRQAQLLLLLSHIRHMSNKGMEHLYSIKCK
NKVPLYDLLLEMLDGHRLQSPGKVAQAGEQTEGPSTTTTTSTGSSIGPMRGSQDTHIRSP
GSGVLQYGSPSSDQMPIP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcagacagtcccatacgcagatttccaaacctctcggagttcctctcagatcc
cgaacgaccctggagagccacgccatctcccccccaaaactctcaccacagcagccgacc
acccccaacagcaacatgtaccctgaggagaaacgcggaggtggtggggcggccgccttt
aactacctggacggagggtatgactacacagcccctgcccaaggcccggcccccctctat
tactccaccaccccccaggatgctcacggacccccctcggatggcagcatgcagtccctg
ggcagcagtcccaccggcccactggtgtttgtgtcctccagcccccagctcagccccttc
ctccaccccccaggccaccatggtctccccagccagtcatactacctggagacctcttcc
acgcccttatacaggtcgagtgtggtaaccaatcagctgtcagcgtcagaggagaagctc
tgcatcgcctccgataggcagcagtcgtacactgcggcagggtcaggggtcagggtgttt
gagatggccaacgagacgaggtactgtgcggtctgcagcgactttgcctctgggtaccac
tacggagtttggtcctgcgagggctgcaaagccttcttcaaaaggagcatccaaggtcac
aatgactacatgtgccctgcaactaaccagtgtacaatggacaggaatcgtaggaagagc
tgccaagcatgccgcctcagaaagtgttatgaagtggggatggtgaaaggaggcttgcgt
aaggaccgtggtgggcgggttctcaggaaggacaagcggtattgtggccctgctggtgac
agagagaaaccctacggtgacctggagcacaggacagcgccccctcaggacgggggtagg
aacagcagcagcagcctcagtggtggtggaggatggtgtgggcccagaatcaccatgcct
cctgaacaggtgctgttcctgctgcagggggcagagcctccggccctgtgttctcgtcag
aaggtggcccgcccctacacagaggtcaccatgatgaccctgctcaccagcatggccgac
aaggagctggtgcacatgattgcttgggctaagaaagtaccaggtttccaggagctgtct
ctccatgaccaggtgcagctgctggagagttcctggctggaggtgctgatgatcggactc
atatggaggtccatccactgccctgggaaactcatctttgcccaggacctcatactggac
aggagtgaaggggactgtgtggagggtatggctgagatcttcgacatgctcctggccact
gtgtctcgcttccgcatgctcaaactgaagcctgaggagtttgtgtgcctcaaagccatc
atcttgctcaactctggtgccttctccttctgttccaactctgtggagtcccttcacaac
agctcggcagtggaaagcatgctggacaacatcactgacgccctcatccaccacatcagc
cattcaggagcctctgtgcagcagcagccaagacggcaggcccagctcctgctcctgctc
tcacacatcagacatatgagcaacaaaggcatggagcacctttacagcataaaatgtaag
aacaaagtgcctctgtacgacctgctcctggagatgctggacggtcaccggctccaatcc
ccaggcaaagtggcccaagctggggaacagaccgagggcccctctaccaccactaccacc
tccacaggctccagcatagggccgatgcgaggtagccaggatacccacatcagaagccct
ggttcgggggtactccagtatggctcccccagctcagaccagatgcccattccatga
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