Salmo trutta (river trout): 115182270
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Entry
115182270 CDS
T08542
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115182270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115182270
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115182270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
115182270
NCBI-ProteinID:
XP_029599745
UniProt:
A0A674BB31
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MAKRIADKELTDRNWDQEDDGEEAGTFSIASDDVMKSRPIKKAKRRAAGSEGQSGGAFKV
FKGFSLAPTSGTGPAAGGVATFSGFGNGVGFKPLSGLSNGNSVKPVTPAFTGFTSSTATK
TTTTPGSLTFSGPSSSAVIAGQRSNGSSPVVSSQSLISSSPLSSNSGNNQEYSRQLTALN
CSVRDWITKHVNGNPLCDLNPIFRDYEKHLASIDKKYGGSGAVIGAAVADESSESRSGAG
GPEEKRAAPPPPPPSSSGTAGSTATAPLFSFSKDEDGSAAAPVESSAVALAPIPAGISFN
LGQKGSSSALGSLSSGEAPSVFSTSLFGGAAPPAFSFSGAKAEAAPTQTTDENGEESDEP
PKVEVQEIKETDAFYSKKCKLFYKKETEFKEKGVGTLHLKTTSDGKTQLLVRADTNLGNI
LLNILVQPSIPCSRMGKNNVMVICVPNPVVDHNNPSNPVAMLIRVKTAEDADELHNILEE
KA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaggattgctgataaagaactgactgaccggaactgggaccaggaagatgat
ggagaggaagcggggacgttttccatcgctagtgacgatgtgatgaagagcaggcccatc
aagaaggccaagcgtcgtgctgctggttcagaggggcagagtggaggagcgttcaaagtg
tttaaaggtttctccctggcccctacgtctggaaccgggccagccgctgggggggtcgcg
accttctccgggttcgggaacggggtagggtttaaacccctgtctggactgtccaatggg
aacagcgtcaaacccgtcactccagccttcactgggttcacctcgtctactgccaccaag
accaccaccacaccaggttcattaacattcagtggtccctcctccagtgctgtcatcgcg
gggcagcggtctaatggttcctcccccgtggtttccagtcagtctctcatctccagctcc
cctctctcctctaacagcggtaacaaccaggaatacagtaggcagctcacagctctcaac
tgctccgtcagggactggatcaccaagcacgttaacggaaaccccctctgtgacctgaac
cccatcttcagggactatgaaaagcacctggccagcatcgataagaaatacggagggagt
ggagctgtgataggagctgctgtggcggacgagagctcagagagccgtagcggcgcaggg
ggaccagaggagaagcgggcagcgccgccgccgccaccaccctcctcctccggtaccgct
ggctcgacagccacggcgccgctgttctccttcagtaaggacgaggacggcagcgccgcg
gccccggtggaaagctcagccgtcgctctcgctccgatccccgctggcatcagctttaac
ttgggccagaaggggagcagctcagcgttggggtctctgagctccggagaagctcccagt
gtcttctccacctctctgttcggaggtgctgcacctcctgccttctccttcagtggggcc
aaagctgaggctgcccccacccagacaacagatgaaaacggggaggaatcggacgaacca
cccaaagtggaagtccaggagatcaaggagactgacgccttctactccaaaaagtgtaaa
ctcttctataagaaggagacggagttcaaggagaagggagtcgggacgctgcatctgaaa
acgacgtcggacggaaagacacagctgttggtccgcgctgacaccaacctgggtaacatc
ctgttgaacatcctggtccagccctccataccctgttccaggatggggaagaacaacgtg
atggtgatttgtgttcctaaccctgtcgtggaccacaacaaccctagcaaccctgtcgcc
atgctcatcagggtcaaaacagcagaggatgctgatgaactgcacaacatactggaggag
aaagcttag
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