Salmo trutta (river trout): 115182290
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Entry
115182290 CDS
T08542
Name
(RefSeq) nuclear pore complex protein Nup50-like isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115182290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115182290
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115182290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
115182290
NCBI-ProteinID:
XP_029599762
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MAKRIADKELTDRNWDQEDDGEEFSDGVHQAGTFSIASDDVMKSRPIKKAKRRAAGSEGQ
SGGAFKVFKGFSLAPTSGTGPAAGGVATFSGFGNGVGFKPLSGLSNGNSVKPVTPAFTGF
TSSTATKTTTTPGSLTFSGPSSSAVIAGQRSNGSSPVVSSQSLISSSPLSSNSGNNQEYS
RQLTALNCSVRDWITKHVNGNPLCDLNPIFRDYEKHLASIDKKYGGSGAVIGAAVAVADE
SSESRSGAGGPEEKPPPSSSGTAGSTATAPLFSFSKDEDGSAAAPVESSAVALAPIPAGI
SFNLGQKGSSSALGSRSSGEAPSVFSTSLFGGAAPPAFSFSGAKAEAAPTQTTDENGEES
DEPPKVEVQEIKETDAFYSKKCKLFYKKETEFKEKGVGTLHLKTTSDGKTQLLVRADTNL
GNILLNILVQPSIPCSRMGKNNVMVICVPNPVVDHNNPSNPVAMLIRVKTAEDADELHNI
LEEKKA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaggattgctgataaagaactgactgaccggaactgggaccaggaagatgat
ggagaggaattttctgatggtgttcatcaggcggggacgttttccatcgctagtgacgat
gtgatgaagagcaggcccatcaagaaggccaagcgtcgtgctgctggttcagaggggcag
agtggaggagcgttcaaagtgtttaaaggtttctccctggcccctacgtctggaaccggg
ccagccgctgggggggtcgcgaccttctccgggttcgggaacggggtagggtttaaaccc
ctgtctggactgtccaatgggaacagcgtcaaacccgtcactccagccttcactgggttc
acctcgtctactgccaccaagaccaccaccacaccaggttcattaacattcagcggtccc
tcctccagtgctgtcatcgcggggcagcggtctaatggttcctcccccgtggtttccagt
cagtctctcatctccagctcccctctctcctctaacagcggtaacaaccaggaatacagt
aggcagctcacagctctcaactgctccgtcagggactggatcaccaagcacgttaacgga
aaccccctctgtgacctgaaccccatcttcagggactatgaaaagcacctggccagcatc
gataagaaatacggagggagtggagctgtgataggagctgcggtggcggtggcggacgag
agctcagagagccgtagcggcgcagggggaccagaggagaagccaccaccctcctcctcc
ggtaccgctggctcgacagccacggcgccgctgttctccttcagtaaggacgaggacggc
agcgccgcggccccggtggaaagctcagccgtcgctctcgctccgatccccgctggcatc
agcttcaacttgggccagaaggggagcagctcagcgttggggtctcggagctccggagaa
gctcccagtgtcttctccacctctctgttcggaggtgctgcacctcctgccttctccttc
agtggggccaaagctgaggctgcccccacccagacaacagatgaaaacggggaggaatcg
gacgaaccacccaaagtggaagtccaggagatcaaggagactgacgccttctactccaaa
aagtgtaaactcttctataagaaggagacggagttcaaggagaagggagtcgggacgctg
catctgaaaacgacgtcggacggaaagacacagctgttggtccgcgctgacaccaacctg
ggtaacatcctgttgaacatcctggtccagccctccataccctgttccaggatggggaag
aacaacgtgatggtgatttgtgttcctaaccctgtcgtggaccacaacaaccctagcaac
cctgtcgccatgctcatcagggtcaaaacagcagaggatgctgatgaactgcacaacata
ctggaggagaagaaagcttag
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