Salmo trutta (river trout): 115182479
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Entry
115182479 CDS
T08542
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115182479
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115182479
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115182479
03036 Chromosome and associated proteins [BR:
stru03036
]
115182479
Peptidases and inhibitors [BR:
stru01002
]
Metallo peptidases
Family M1
115182479
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115182479
Coactivators
SAGA/TFTC/STAGA complex
115182479
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
115182479
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
Peptidase_M1
Peptidase_M1_N
IL2
SR-25
Motif
Other DBs
NCBI-GeneID:
115182479
NCBI-ProteinID:
XP_029599941
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MHEIKMNRKKDKGFESPRPFKLTHQVVCINNINFQRKSVIGFVELTIFPTVVNLNRIKLN
SKQCRIYRVRVNDLEAPFIYNDPTLEVCHHESKQRNLNYFSSAYTAAVSAVDPDAGHGEL
VIKVPSELWKQGDEMNVLKVYIEFSLDQPKGGLHFVVPDVEGSMAERGAHVFSFGYQNST
RFWFPCVDSYSELCTWKLEFTVDASMVAVSCGDLVETVYTHDMRKKTFHYVLPIPTAASN
ISLSVGPFEILVDPYMHEVTHFCLPQLLPLLKHSMSYLHEIFEFYEEILTCRYPYSCFKT
VFVDEAYVQVSSYASMSIFSTNLLHSAMIIDQTPLTRQCLAQALAQQFFGCFISRMSWAD
EWVLKGISGYIYGLYLKKTFGVNQYRHWIKEELDKMVEYELKMGGVLLHPTFGGGKDKDN
PTPHLHFSIKHPHTLSWKYYKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQ
KYQSHMWSQMLVSTHSFLKSISNVSGKDIGPLIKQWVDQSAVVKFFGSFAFNRKRNVLEL
EIRQDYTSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPL
MNGEEVDMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLRYERDVVAQEESI
LALEKFPTPASRLALTDILEQDQCFYKVRQGACFCLAKIANSMMSTWTGPPAMKSLFTRM
FCCKSCPNIVKTNTFISFQSYFLQKTMPVAMAQLRDIQNLCPKDVLNFILDLIKYNDNRK
NKFSDNYYRAELIDALTNSLTPAISISNEVRTVDNLNGDVRLILEEITRSLNMEKLLPSY
RNTITVSCLRAIRMLQKNGHIPSDPSLFKSYAEYGHFVDVRVAALEAVVDYTRVDRSSVE
LQWLLNMVQNDPAHYIRHKILSMLGKNPPFTKAAESPLCNEALVDQLWKLMNSGTSHDWR
LRCDAVNLYYTLFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKPEQGPDTTEMTGNTMG
VHIPVMGFTSSLDEGLITMETVSSVSMSSGVAPPPQGLKRKLDSVVGPLGSSPPEPGQVL
QEEDTSKKFKIRFNTMEEDEIDMESPHDSQAFIHHHLNILERPSTPGKEPPAVDQAVLSL
PVTPLPSSFSKESTSSSKHSGDHHHHHHHHEHKKKKKKKHKHKHKHKHESKDKERDSHAF
SNSPASGRSVRSPSMSD
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaaatcaagatgaacaggaagaaggacaagggatttgagagcccgcggcctttt
aaattgactcaccaggttgtctgcatcaacaacatcaacttccaaagaaagtctgtgatt
ggctttgtggagctgaccatcttcccaactgtggtcaacctgaaccggatcaaactcaac
agcaagcagtgcaggatctacagggtcagagtcaacgacctagaagcaccattcatatac
aatgaccctactctagaggtctgccaccacgagtccaagcagaggaacctgaactatttc
tccagtgcctacacagcagcagtcagtgctgtggaccctgatgcaggacacggcgagctg
gtcatcaaagtcccctcggagctgtggaagcaaggagacgagatgaatgtgctgaaggtg
tacatagagttctctctggaccagcctaaaggaggccttcactttgtggtgcctgacgta
gaggggagcatggctgagagaggagcacacgtcttctccttcggataccagaactccaca
aggttctggttcccctgtgtggactcgtactctgagctgtgcacctggaagctggagttc
acagtggatgcctctatggtggctgtgtcctgtggggacttggtagagactgtctacacc
catgacatgaggaagaagaccttccactacgtcctccccatccccaccgccgcctccaac
atctcactgtctgtcgggccctttgagatcctggttgacccctacatgcatgaggtgacc
cacttctgtttgccccagctcctgcccctgttgaaacactccatgtcctacctgcatgag
atctttgagttctacgaggagatcctgacctgtcgatatccttactcctgcttcaagact
gtgtttgtggacgaggcctacgtccaggtgtcttcctacgcgtcgatgagcatcttcagt
actaatctgctccacagtgctatgatcatagaccagacccccctgaccagacagtgttta
gctcaggccctggcccagcagttctttggctgcttcatctccaggatgtcctgggctgat
gagtgggtgctgaaggggatctctggctacatctatggtctgtacctgaagaagaccttt
ggagtgaaccagtaccgccactggatcaaagaggaactggacaagatggtggagtatgag
ctgaagatgggaggagttctcttacacccgaccttcggtggaggcaaagacaaggacaac
cctacccctcacctccacttctccatcaagcaccctcacaccctgtcctggaagtactac
aagatgtttcagtgtaaagcccacctggtaatgaggctcattgagaacaggatcagcatg
gagttcatgctgcaggtgttcaacaagttactaagcctggccagtacagcgtcctcgcag
aagtaccagtcacatatgtggagtcagatgctggtatccacccacagcttcctcaagtcc
atctccaacgtgtcgggaaaggacataggacccctcatcaagcagtgggtagaccagagt
gcggtggtgaagttctttggcagttttgccttcaacaggaaacggaacgttctagaactg
gagatccgacaggactacacctcctctggaacacagaaatatgtggggcccatcaaggtg
acagtacaggagctggatggatccttcaaccacacgctacagatcgaagagaacagcctg
aagcacgacatcccctgccactcaaagagcagacgaaacaagaagaagaagatccctttg
atgaacggggaggaggttgacatggacctgtctgctatggatgcggattctcctttgctg
tggatccggatcgatccagacatgtctatcctgcgtaaggtggagtttgagcaggcagac
ttcatgtggcagtaccagctcaggtacgaacgggacgtagtggcccaggaggagtctatt
ttagccctggagaagttccccacgccggcctcccgtctggccctcactgacatcctggaa
caggaccagtgtttctacaaggtccgccagggggcctgcttctgcctcgccaagatagcc
aactccatgatgagcacctggaccggtcctccagccatgaagtctctgttcaccaggatg
ttctgctgtaagagctgtccaaacatcgtcaagaccaacaccttcatcagcttccagagc
tacttcctacagaagaccatgcctgtagccatggctcagctcagagacatccagaacctc
tgtcccaaagatgtcctcaacttcatcctggacctcatcaagtacaacgacaacaggaag
aacaagttctctgacaactactaccgtgccgagctgattgatgccctcaccaactccctg
accccggccatcagcatcagtaacgaggtgcgcaccgtggacaacctcaacggagacgta
cgcctcatcctggaggagatcacacggtctcttaacatggagaaactactgcccagctac
cgcaacaccatcactgtcagttgtctcagagctatccggatgcttcagaagaatggtcat
attcccagtgacccctctctgtttaaatcctatgcagaatatggacactttgtggatgtg
cgtgtcgcagcactggaagctgtagtggactacacaagagttgacaggagctccgtggaa
ctgcagtggctgctcaacatggtccagaatgacccggctcattacatcagacacaagatt
ttaagcatgctgggtaaaaaccctcccttcaccaaagcagccgagtctccactctgcaac
gaggctctggtcgaccagctgtggaaactcatgaactcaggtacgtctcatgactggcgg
ttacggtgtgacgcggtgaatctgtactacactctgtttggtctgacgcgtccctcctgc
ctgcccctgcccgagctgggcctggtactcaacctcaaggagaagaaggctgtcctcaac
cccactatcaagcctgaacagggaccagacaccacagagatgactggcaacaccatgggc
gttcatatccctgtcatgggcttcacgagcagtctggatgagggcctgatcaccatggag
acagtgtccagcgtttctatgtccagtggtgtggccccgccccctcagggtctgaagagg
aagttggacagtgtagttggcccgctgggctcgtccccaccggagccaggccaggtactg
caggaagaggacaccagtaaaaaattcaagatcagattcaacaccatggaggaagatgag
attgacatggagagtccccatgacagccaggcgttcatccaccaccacctcaacatcctg
gagaggccatccacaccaggtaaggaacctccagccgtggaccaggccgtcctctccctg
cctgttacccccttaccttcttccttcagcaaagagtccacctcttcctccaaacacagc
ggtgaccaccaccatcaccaccaccaccacgagcacaagaagaagaagaagaagaagcac
aaacataaacacaaacacaaacatgagagtaaagacaaggagagggactcccatgccttc
agtaacagccctgctagtggacgctccgtgaggtctccatccatgtctgactag
DBGET
integrated database retrieval system
