Salmo trutta (river trout): 115182587
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Entry
115182587 CDS
T08542
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
115182587
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115182587
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115182587
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115182587
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Protocadherins
115182587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
115182587
NCBI-ProteinID:
XP_029599977
Ensembl:
ENSSTUG00000031455
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MFNKTGPGLSSRGVLWGLCILVLYTSPLSCFAHFSQAKELVYKIKEGLPSGTLIGSLGSD
LHLDLSLDPHVLFSLPQKKPGDQYVTLNSTTGQLFTSGNEIDRETLCPDASEYNQGCVLS
LDVFVLPQQYFQLVKVKILVEDVNDNRPRFPTGEIRVSIPENTQVNTRFAVEQSATDPDL
GFHGVQTYWLVNDFGVFTLDVEENEGGELTPFLIVTDELDRERQEEYVTDIIAEDGGLPP
LLGTATLRIIITDVNDNCPRFTESQVNVTLYGNTTKGEQLSRLHAFDPDQGANAVISYAY
SDRVPGEARALFHLDRITGVIKLAGQINTATGKFYKLTVLANGPGCIPAVAMVTVHVIRV
ASGPPVIMPRYIAAEKDGVVTMKESEPPFSPIAFFTVKNTDQRGQRTECLLEGSGPFRLS
PYKVLKNEYLLETTEPLDYEQRQDYELTVVLRNPRGLIIKTFIKILVQDENDNAPVFKQS
LCEVSVEENNPPNSFLAQLQATDQDSEARGEVTYLLGSDAPSIFLLDRLTGVLTVSTSLD
REEKQTYRFMVRAVDRGTPRRESIATVVITVLDRNDNSPRFINKDFTFFVPENFPGFGEI
GVLSVTDADAGENGWVALSILNGSDIFVIDTGRGALRARTPLDREQQGTYYLWIEAVDGG
EPSLSCLTMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPSTLPGTSITEVYAVDKDTGMNA
VIAYSIIKRKGGEPGSFDIDPDTGNITLKRELSDRGLYSLLVKVSDHGQPEPLHSTVLVN
LFVNETVSNESYIQSLLTGEAETQMEEKPWYVGKLTERPGREDVFPCRPLLIALSVTCLG
LFCIVVTLTAYICCKKLKKWKKHQMKRLEVEMPLKMNGDLQDVDRKRMEISNI
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaaacaggacccggactaagctcgagaggagtactgtggggtttgtgcata
ctcgtcctttacaccagccctctctcctgttttgctcatttcagccaagcgaaagagctg
gtctataagataaaagaaggattaccctcagggacgctcatagggtccctgggctccgat
ttacacttggatttatccctcgatccccatgttttattcagtctgccccagaagaagccc
ggtgatcagtatgtcactctgaacagcactacgggacagctgtttacgtctgggaatgag
atcgacagggagacgctctgccccgacgcatcagagtacaaccagggctgcgtcctctcc
ctggatgtgttcgttctaccccagcagtacttccagctggttaaggtcaagatcttagtg
gaggatgttaacgataaccggccgcgcttcccgacaggcgagattagggtttccatcccg
gagaacacccaggtcaacacgaggtttgcggtggagcagtcagcgacggatcctgatctg
gggtttcacggagtccagacttactggctggtcaacgactttggggtgttcactctggac
gtagaggagaacgaagggggtgagctgacacccttcctcatcgtgaccgacgagctggac
cgggaacgacaggaggaatacgtaacggatattatagcagaggacggcgggttaccacct
cttcttggtaccgccacgttaaggattataatcactgatgtcaacgataactgtcctcgg
ttcacagagtcacaggtcaacgtgacgctgtacgggaatacgactaaaggagagcagctg
tccaggttacacgccttcgaccccgaccagggcgccaacgcggtgatcagctatgcgtac
agcgaccgcgttcccggagaggctagagctctattccatctggaccggattaccggggtg
atcaaactggccggtcagatcaacaccgcaaccgggaagttctataaactcactgtcctc
gccaacgggcctgggtgcatccctgccgtcgccatggtgacggtgcacgtgatccgggta
gcttccggtccgccggttattatgccgcgctacatcgcggcggagaaagacggtgtggtc
acgatgaaagagtccgaacctcctttttccccaatcgcgtttttcaccgtgaagaacacg
gaccaaagaggacagaggacggaatgcctgctggaaggatccggcccgttcagactgtca
ccttacaaagtgttgaagaacgagtatctgttagagacgacggagccgctggactacgag
cagaggcaggactatgagctgactgtggtgctcaggaaccccagaggtctcatcatcaag
accttcattaagatcctggttcaggatgaaaacgacaacgcgcctgtcttcaaacagtct
ctgtgtgaggtctctgtggaggagaataaccctcccaacagcttcctggcccagctccag
gccacagaccaggacagtgaggccagaggagaggtcacctacctgctggggtcagacgct
ccctccattttcctcctggacaggctgaccggtgtgctgaccgtgtccacatctctggat
cgagaagagaagcagacgtacaggttcatggttcgggcggtggaccgagggacccccagg
agagagtctatagctacagttgtcatcactgtgctggaccgtaatgacaacagcccgcgt
ttcatcaataaagacttcacattctttgtgccggagaatttcccggggtttggcgagatc
ggcgttctctcggtaacggacgcggacgcaggcgagaacggctgggtggcactctccatc
ctcaacggcagcgacatctttgtgatcgacacggggcgaggcgctctaagggcccgtacc
cctctggaccgggagcaacaggggacgtactacctctggatcgaagcagtcgacggaggg
gaaccctctctctcctgcctcaccatggttactgtcctcctcctcgacgtaaacgataac
cctcccattgtcttgttcccccagtctaaccagtcctacatgctggtgttacctagcacc
ttaccggggacctccatcacagaggtgtacgccgtggataaagacacaggaatgaacgct
gttatcgcctacagcatcatcaagaggaaaggtggcgagccgggatcgttcgacatcgac
ccggacacagggaacatcacgttaaagagagaactcagtgaccgcggtctctacagccta
ctggttaaagtctcggatcacggtcagccagaacctctccactccaccgtcctggtcaac
ctctttgtcaatgagacggtttctaatgagagctacatccagagtcttctcaccggggaa
gctgagacccagatggaggagaagccgtggtacgtggggaagctgacagagaggcctggc
agggaggacgtgttcccctgtcggccactactcatagctctgtcagtaacctgtctggga
ctattctgcatcgtcgtcacattgactgcttatatatgctgcaagaaactgaagaaatgg
aagaaacatcaaatgaaaagactggaggttgaaatgcctttgaagatgaacggtgacttg
caggacgtagatagaaagcggatggaaatctctaacatttga
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