Salmo trutta (river trout): 115183163
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Entry
115183163 CDS
T08542
Symbol
tulp4
Name
(RefSeq) tubby-related protein 4
KO
K24720
tubby-related protein 4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115183163 (tulp4)
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Other domain-containing proteins
Tubby family proteins
115183163 (tulp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_HPS5
WD40_Prp19
WDR55
Beta-prop_ELP1_1st
DUF3527
Motif
Other DBs
NCBI-GeneID:
115183163
NCBI-ProteinID:
XP_029600386
Ensembl:
ENSSTUG00000022722
LinkDB
All DBs
Position
1:complement(21638076..21688791)
Genome browser
AA seq
1634 aa
AA seq
DB search
MFAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRTTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHESDGIVSMSWNYPSFLVEDSSESDTDSDDYTPP
QVQRLKPLLTVSFTSGDISLMNNYDDLSPTLIHTGLKDVVVQWCSQGDLLAVAGMERAVL
PPDSSCLPPTRNAIVKFYNVCGEHIYTLDTPAQRPITTLCWGHRDSRLFLACGAVLYVVR
VDHRVASLQLLCQQGIAGALREEKDVAKLTMPSRLCSYVTTAFTPTIKPPIPDPNNMRDF
VSYPTAGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDP
KTDGKADEVYGNSLISSMIDSCNCSDSSDIELSDDWVGKKSPKISRGSKSPKLPRINIDP
RKSPKLSRATQEISRSPRLPIRKPSIGSPSLTRREFPLDDITQHNYLAQVTSNIWGTKFK
IVGLATFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMDYINLPVFNPNVFSEDEDD
LPVTGASGVADDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNVQLDILSNPTA
ISSVASAGAGGSSDQGQDTILTAQYTVPSRYSSPGQVIFGGLEMSRLLVGPPPSHHHQQQ
QQSHPQSHQQPLQVSVEHEHLLKIKPTRSAPQLAEGDTVVFSAPLELSKMNPPPPYPGTV
AAAAAAASAAAANAASGQAGGSNGTPPPVDLCLKKGEFSLYPPGQQAAQYPTPLGYERIT
TFDSRGNVEEVCRPRTRLVCNQNIYTLQVPGSSATLRVTSSSSTDGKKIQLPYASATLNR
LTVPRYSIPSGDPPPYPDTANQNTTGGRSTGQRLDSSLIHATLRRNSREAALKVSQMLDP
QRTLPPKAKSQNATLAASYQQRVPKALYTCSQCSSNSSGLSSAASSAPSGTANGIAGGTI
IRQDFPPGNGAPHSTVIVHSNSASPLVSQSSYNLLSLDGSGNGGGGGNRDRADYVNSAFT
EDEAMSQSLRHLALGGADVSGLTVKRPPPYQWDPATTEEVWVPQERTGTLSSAGPTGPHK
PPPLILSPAQHLDISRLPFILSPKSPTSPSAASFQAAAAAAGYQISLQYTPGTTYSGPQQ
QPMPGSPRLSSPKKVVAPVPFTQQDATLVLPPGYPANLSNLACCPLPPMYPGGSSCAGLP
IPPIALHTPWGTYNPCPPMPSPSGTLPPMPPKLSQMMVDKTVLSPPPPPPPPPPPPPAEL
QLQGHGGSPEAMAMEAGEGFQEVLSLNESPVPSSAEKFGKKNRKRADGRAEEANAPAIAE
GSKSKKEGRALGDFNSLISSPRLGSREKKKPKGQKEQQLKAKKLSKAPTNSEFQDSSESE
PELFISGDELLNQCQSGKKGWKSKRSLRAASELEEIKCRKANEKEDRGLGSQGFVYVMAN
KQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAVQ
AFAVALANVTQRLK
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgcagtggagcatggccccgtcctgtgcagcgactccaacatactctgcctg
tcatggaagggccgggtacccaagagcgagaaggagaagccggtgtgccggcggcgctac
tatgaggagggctggcttgccacagggaatgggagaggagttgtcggggtaacgttcaca
tccagccactgcagaagggatcggactaccccacagaggatcaacttcaacctgagagga
cacaatagtgaggtggtgctggtgcggtggaacgagccctttcagaagctggccacctgt
gacacagacggagggatctttgtgtggatccagtacgagggccgctggtctgtggagctg
gtcaacgatcgcggggctcaggtgagtgacttcacctggtctcatgacggtacccaggct
ctcatctcttaccgtgatggctttgtcctggtgggctcggtcagcggccagagacactgg
tcatcagagatcaacctggagagccagatcacctgtggtatctggacccccgatgaccag
caggtgttgtttggtactgcggacggccaggtgatcgtgatggactgccatgggcgcatg
ctggcccacatcctgctgcacgagtcagacggcattgtcagcatgtcatggaactacccc
agcttcctagtggaggacagcagcgagagcgacacagactctgatgactacacaccacca
caagtccaacgtttgaagcctctgctgacggtcagcttcacctctggagacatcagcctg
atgaacaactatgatgacctctctcccactctcatccacactggcctcaaagatgtggta
gtccagtggtgttctcagggggatctcctggctgtggctgggatggagagagctgtcttg
ccccccgactcctcctgtctacctcctaccagaaatgccatcgtcaagttctacaacgtc
tgcggagagcacatctacacactggacacgcctgcacaacgtcccatcaccacgctgtgc
tggggtcaccgggactctcgtctgttcttggcttgtggcgcggtactctacgtggtgcgg
gtggatcaccgggtggccagcctgcagctgctgtgccagcagggcatcgccggggcgctc
cgggaggagaaggacgtggcaaagctcaccatgccctctcgtctctgttcttacgttacc
acagccttcacacccaccatcaagccccccattccagaccccaacaatatgcgtgacttt
gtgagttacccgacggcggggaacgagcggctgcactgcaccatgaagcggacggaggac
aaccctgaggtgggcgggccctgctacaccctctacctggagtacctggggggcttggtg
cccatcctcaagggccgacgcatcagcaagctccgtcccgagttcgtgatcatggacccc
aagacggacggcaaagcagatgaggtgtatgggaacagtctgatctcgtcgatgatagac
agctgtaactgttcagactccagtgatatagagctgagtgacgactgggtcggcaagaaa
tccccaaagatatccagaggcagcaagtctcccaaacttcccaggatcaatattgacccc
aggaagtcccccaaactgtcccgcgctacccaggagatctcgcggtcgccacggttaccc
atccggaagccatccattgggtccccaagtctcacccgcagagagttccccttagatgac
atcacacagcataactaccttgctcaggtcacatccaacatttggggaacaaagtttaag
attgtgggacttgccaccttcttgccaaccaatcttggtgcagtgatctacaagacaagt
ctgctccacctgcagcccagacagatgaccatctacctgccggaggtgcgtaagatctcc
atggactacatcaacctgcctgtgttcaaccccaacgtcttcagtgaggacgaggatgac
ctgcctgtcaccggggcctcgggcgtggccgacgacaaccctccctgcactgtcaacatc
cctattgcccccatccatagtcccgcccaggccatgtcccccacccagagcatcggcctg
gtccagtccctcctagccaatcagaacgtccagctggacatcctatccaatcccacggcc
atctcctccgtggcttctgcaggggcgggggggtcgtctgaccagggccaggacaccatc
ctgaccgcccagtacacggtccccagcaggtactccagtcctggacaggtcatctttgga
gggctggagatgagccggcttctggttgggcctcctccctctcatcaccaccaacagcaa
caacaaagccatccacagagccatcaacaaccactgcaagtcagcgtagaacatgagcac
ctgctgaagatcaaacccacccgctctgccccccagctggctgagggggacacggtggtg
ttcagcgcccctctggagctcagcaagatgaaccccccgcccccctaccccgggacggtg
gccgctgccgcagcagcagcctctgctgcagcggccaacgctgcctctggacaggctggg
ggcagtaacggcaccccgccgccagtggacctgtgcctgaagaagggcgagttctccctg
tatcctcctggccagcaggcggcacagtacccaacgccgctaggctacgagcggataact
acgttcgacagcaggggtaacgtggaagaggtgtgccggcctcgaacgcggcttgtctgc
aaccagaacatttacacgctccaggtcccgggaagctcagccaccctccgggttacctcc
tcttcctcaacagacgggaagaagatccagctgccctacgcctcggcaaccctcaacagg
ctcaccgttccccgctattccatacccagcggagatccgcccccctaccccgacacagcc
aatcagaacaccacaggggggaggagcaccggacagaggctggacagcagtctgatccac
gccacactcaggcggaacagccgagaggccgctctcaaagtttcccagatgctggaccct
cagaggaccctgccccctaaagccaaatcccaaaacgctacactggcggcttcctaccaa
cagagggtgcccaaagccctgtacacctgtagtcagtgcagtagtaacagcagtgggctt
agcagtgcagccagcagtgctcccagtgggactgcgaatggaatcgcaggaggtacaatc
attagacaggattttcctccagggaatggagctcctcacagcacggtgatcgtccactcc
aacagcgcttctcccctagtctctcaatcctcctacaacctgctgagcctggatggctct
gggaatggaggaggaggtgggaacagagacagggctgactatgtgaactcagccttcaca
gaggatgaagcaatgagtcagtcattgaggcatctggcactagggggtgcagatgtgtct
ggactgacagtcaagaggccaccgccgtaccagtgggacccagccaccactgaggaggtg
tgggtgccccaggaacggaccggtactctgagctctgctggccccaccggaccccacaaa
ccacccccgctcatcctcagcccagcccagcacctcgacatctcccggctgcctttcatc
ctctcccccaagtcccccaccagccccagtgctgcctctttccaggctgctgctgcagct
gcaggttaccagatctcccttcagtacactcctggcacaacctacagtgggccccagcag
cagcccatgccaggctctccccgtctcagctcccctaagaaggtggtggccccggtccct
ttcacccagcaggatgccaccctggtcctaccacctggctatccagccaacctgtctaac
ctggcctgctgccccctccctccaatgtacccggggggaagctcctgtgccgggctcccc
atcccccccattgccctacacaccccctggggcacctacaacccctgcccccccatgccc
agcccctcggggacgctgccccccatgccccccaagctctctcagatgatggtggacaag
acagtcctctctccccctcctcccccaccacctccccctccaccgcccccagcagaactg
cagctgcagggtcacggtggctcaccagaggccatggcaatggaggccggagagggcttc
caggaggtcctctccctcaatgagagccccgtgcccagcagtgctgagaagttcggcaag
aagaaccgcaagcgggcagatggcagggctgaggaggccaatgcaccggccatcgccgag
ggaagcaaatccaagaaggagggccgggccctgggcgacttcaactctctgatctccagc
ccgcggctgggcagcagggaaaagaagaagcccaaaggccagaaggagcagcagctgaag
gctaagaagctgagcaaggctcccacaaacagcgagttccaggacagctcagagagtgaa
cctgagctcttcatcagcggggacgagctgctcaaccagtgccagagcggcaagaagggc
tggaagagcaagaggagcctacgggcggccagcgagctagaggagatcaagtgccgcaag
gccaatgagaaggaggaccgcgggctgggaagccagggctttgtttatgtgatggccaac
aagcagccactgtggaatgaggccactcaggtctaccagctggactttgggggacgtgtt
acacaggagtcggccaagaacttccagatcgaactggaggggagacaggtgatgcagttt
ggcaggattgatggcaacgcctacatcctggacttccagtacccgttctctgctgttcaa
gccttcgcagtggctctagctaatgttactcaacgcctcaaatga
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integrated database retrieval system