Salmo trutta (river trout): 115183709
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Entry
115183709 CDS
T08542
Symbol
gen1
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115183709 (gen1)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
115183709 (gen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
115183709
NCBI-ProteinID:
XP_029600676
Ensembl:
ENSSTUG00000022827
LinkDB
All DBs
Position
1:complement(21714156..21721033)
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AA seq
976 aa
AA seq
DB search
MGVYDLWSILGPVRESVPLYSLTGMTLAVDLSLWVCEAQHVQAMMGKVTKPHLRNLFFRV
SSLTLMGVKLVFVLEGEAPKLKAETMSKRTDMRFGGFDKSAPKKQTTKTTNRGRFNAVLR
ECAEMLDCLGVPWVTAAGEAEAMCAFLDAQGLVDGCITNDGDTFLYGAQTVYRNFNMNTK
DPQVDCYRTSRMETELQLARETLVGLAILLGCDYIPKGIPGVGKEQALKLIQTLKGQTLL
QRFSQWREEGVVAPEWVLKKVPHCHLCRHPGSAKAHERSGCVLCDSKHFCEPQDYDYQCP
CQWHCCEQTRQASSTDASIRKKTLASDKFPFTEIINEFLVDKDKPVHNFKWRKPNMLLMQ
NFAYNKMEWPKHYTSEKVLVLMTYNELMNRKHGRATSSLIKPLRIWKPRVRNAIASFEII
WSKPDHYVFSEDHPEDSQDEVRTVEEEALFRLAYPHVVERYLKEKAENKTKKKKPKGKKD
KPSDHCDVSDLLAKMSLHSSTADNNTQQPSAAAAALTITPSNNSVLVLEGPGSESPKKHL
DPGKDHPRLEVRLGAQIQEVMSPLSFTSSGKIPEAVASSPSVSMVMDALHLSDIDWESQS
FTSSPPPQAAGACTATDPKSLQTTNDSVEERITKLGPSTDLRAAEAIPGPCYAECSLRDR
VLMRNTCKSVNMADNDDVTTIHVNSQSAAPLDLIDNNNSGPKPMALIPIKSSNDSKPSEQ
PLVCGKKATLVDKDQSIALPHKPQPAHLSSKPISLNSTQTGPFTSTQTSPVTATQTQGAK
QHGAGEPKPPQKYRFVKKAISSSSALPQRSHSEPSNTQPGQGDRNTKSHQETKKSVCASV
CSSSEDSDTENQCRGGGQSRAKVKPKSRPRCQYLTDYSLKPTSKPSTSTKAAWDTVTAQP
LRPRAVSASMGEQPIIGSSVSTIGKCQDVPPIRVDDDIVFIPSPVSPVTMSDGDDSVICS
KSPLPLAERVKLKFLK
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgtacgacctgtggtccattctggggccggttcgggagtcggtgccgttgtac
agcctcaccggaatgactctggctgtggaccttagcttgtgggtctgcgaggcccagcac
gtccaagcaatgatggggaaagtcaccaaacctcacctccggaatctgtttttcagagtt
tcctctctcacactgatgggggtaaagctagtttttgtcctggagggagaggcccccaaa
ctcaaagcagagaccatgagcaagaggacagacatgagattcggggggttcgacaagtca
gcccctaaaaaacaaactacaaagaccaccaacaggggtcgcttcaatgctgtgctgaga
gagtgtgcagagatgctggactgtctgggtgtcccctgggtgacagcggcaggggaggcc
gaggccatgtgtgcctttctggatgcccagggcctggtggacggctgcatcaccaacgat
ggggacacttttctctacggagcgcagaccgtctacagaaatttcaacatgaacaccaag
gatccacaggtggattgttacaggacttctaggatggagacagagctgcagctagccagg
gagacactcgtgggtctggccatccttctgggctgtgattacattcctaagggtatacca
ggagttgggaaagagcaagctctaaaactcatacagacattgaaaggacaaacactttta
caaagattcagccagtggagggaggagggcgtggttgcgccagagtgggtcctaaagaag
gtccctcactgccatttgtgtcgccatcctgggtcagccaaggctcacgagcgcagtggc
tgtgtgttgtgtgacagcaagcacttctgtgagcctcaagactatgactaccagtgtcct
tgtcagtggcactgctgtgagcagacacgacaggcctcttcaacagatgccagcatcagg
aagaaaacactggcaagtgataaattcccttttacagagatcataaatgaatttctggta
gacaaagacaagcctgtccacaatttcaaatggaggaaaccgaacatgctattaatgcag
aactttgcgtacaataagatggagtggcctaagcactataccagtgagaaggttctggtc
ctgatgacgtacaatgagctgatgaacagaaaacatggaagagcgacgtcatctctgata
aaacctctacgtatatggaagccaagagtaaggaatgcaatcgccagctttgaaatcatc
tggagtaagccagatcactatgtgttttctgaggaccaccctgaggacagccaggacgag
gtgaggacagtggaggaagaggctctgttccgcctggcctacccacacgtggtagagcgg
tacctcaaggagaaggctgagaacaagaccaagaagaagaaaccaaagggtaagaaagac
aagccttcggatcactgtgatgtttctgacctcctggccaagatgtctttgcacagttcc
actgctgacaacaacacccaacaaccctctgccgcggcagcagcactgaccattacacca
agtaacaactccgtgttggtcctggagggtccagggtcagagtctccaaaaaagcatctg
gatcctggtaaagaccatccccgcttagaagtacgtcttggagctcagatacaggaagtg
atgtcacctctgtctttcacttcctctgggaagattccagaagcagtggcctcctctccg
tctgtttccatggtaatggatgctcttcacctgagtgacattgactgggagtctcagtca
ttcacgtcctccccacccccgcaggctgctggtgcttgcactgccactgaccccaagtca
ctccaaaccacaaatgatagtgtcgaagaaaggatcacaaaactgggcccctctactgat
ctcagagcagcggaagccataccagggccatgttatgcagagtgttcgctgagggacagg
gtcctaatgagaaacacctgcaagtctgtgaacatggcggacaatgatgatgtcaccacc
atacacgtaaactcccagtcagcagcacccctggatttaattgataataacaacagcggc
cccaagccaatggcactgatacccattaaaagcagtaatgattccaagccatcagaacag
ccgctggtgtgtggcaagaaagccacacttgttgataaggaccagagcattgcattgccc
cataagcctcaacctgctcatctcagctcaaaacctatctcattgaactcaacacaaaca
ggcccatttacctcaacacaaacaagcccagtcacagcaacacaaacacaaggggctaaa
caacatggtgccggtgaaccaaagcctccacagaagtacagattcgtaaagaaggccata
tcatcatcttccgctctgccacaaaggagccactctgaacctagcaacacacagcctggt
cagggtgacaggaacacgaagtcacatcaagaaaccaagaagagtgtgtgtgccagtgtg
tgttcatcgagcgaggacagtgacacagagaaccagtgtcggggaggagggcagagcagg
gccaaagtcaaacccaaaagcaggcccaggtgccaatacctcacagactactcactgaaa
cccacctccaaacccagcacctctacaaaggcagcctgggacaccgtgaccgcccagccc
ctcaggcctagagctgtgtctgccagtatgggtgaacaaccaataataggcagctctgtg
tctaccatagggaagtgccaggatgttcctccaattagagttgatgatgacattgtgttc
attccaagccccgtttccccagtgactatgtctgatggtgatgactcagtgatttgcagc
aagagcccactgccattggcagagagggtgaagctgaagttcctgaaatga
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