Salmo trutta (river trout): 115183768
Help
Entry
115183768 CDS
T08542
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
stru
Salmo trutta (river trout)
Pathway
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115183768
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115183768
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115183768
Intermediate filaments
Intermediate filament-binding proteins
115183768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
115183768
NCBI-ProteinID:
XP_029600718
Ensembl:
ENSSTUG00000045153
LinkDB
All DBs
Position
Unknown
AA seq
2348 aa
AA seq
DB search
MTTVAVEYEHMEITQQYSSSDMVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKT
FTKWVNSHLSRVSCRITDLYRDLSDGRMLIKLLEVLSGERLPKPTRGRMRIHCLENVDKA
LQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETDGDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLNGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKTWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVDAATKKHEAIETDITAYEERV
QAVVSVAKELEAEKYHDIKRIAARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMMLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNNNAQKFAIDG
DVYKPCDPQVIRDRVAHMEFCYQELTQLAAERRAHLEESRRLWKFFWEMAEEEGWIREKE
QILSSDESGKDLTGTVRLLSQHRALEDEMNGRAGHLQHTITEGQAMADGGHFGAAKIREC
ITDLRAQWAALEELAAVRKAHLEEACALHQFQADADDADAWTLDALRIVSSGEVGHDEFS
TQALVRKHKDAAAEVASYRLVIDALHEQAGALPEEQVQSEEVKGRLAGIEERYKEVAELT
RLRKQALQDALALYKMFSEADACEVWIDEKEQWLNGMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHNGHPSEKNIKAQQDKLNNRWSQFRDLSDQKKESLISALGVQ
NYHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLVAIEDKLGDLRCE
AERLAGEHPDQAKAIKGRLAEITAVWEEMKATLRNREESLGEASKLQQFLRELDDFQSWL
SRTQTAIASEETPNTLAEAEKLLAQHEGIKNEIRNYEKDYQKMRDMGEMVTRGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQDLLSQSHAYQLFLRDTKQAEAFLNNQEYMLAHTEMP
TTLEGAEGAIKQQEDFMTTMDANEEKINGVVEAGRRLASDGNINADRIQERAMSIDDRHK
KNREAALGLLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIEKDGMQLVLEKPETESVVKEKLSALQKMWEVLESTTQTKAQCLFD
ANKAELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQILENQVGVRQREVVE
LQSQALVLSQEGKDTEEVDCQRQMVEHKFKELLDPLRKRKNFLVASREIHQFNRDVEDEI
LWVEERMPIATSTEHGLNLQTVQLLIKKNQTLQKEIQGHQPRFDDIFERSESLLMEDSLA
VEAIRQHLADLQQLWGLMIEETEKRHTRLEEAHNAQKYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSSVAMLKKHQIVEQSVEDYAETVHQLSKTSRGLTAAGHPESERIGMRQSQVDKL
YAGMKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDAVNRLSDELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASYELHKFYHDAKEILGRILDKHKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEALNTLLEACDVRRVHLLDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLA
RKHYASEEIKDKLLQLMDKRKDMIDKWEDRREWLRLILEVHQFGRDAGVAEAWLLGQEPY
LFGRELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEEKMRK
TPSPEPLPAQDSPLQSGVENGLQNGLPSDQDSPQNGVDRVEIMNGVAEQNSKDLSPIPSP
TASRRGKGSLSSTLLTQNHDSPVAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNQEM
GFYKDNKGAGQGIPYHNAIPISLMGAVCDVAMDYKKKKHVFKLRVADGNEYLFQAKEEEE
MSTWIQAILNAGTPDKVSITPSNQSTPASSRAQTLPVTLTTESSPGKREKDKEKDKEKRF
SLFSKKKL
NT seq
7047 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgtggaatatgaacacatggagatcacgcagcagtacagtagcagc
gacatggtcaacaaccgctgggatgacgagtgggataacgagaacagctcggctcgcctg
ttcgagcgctcgcgcatcaaggccctggcagatgagcgcgaagcggtgcagaagaagacc
ttcaccaaatgggtgaactctcacctctcccgggtgtcctgccgcatcacggacctgtac
agggacctgagtgatggacgcatgctcatcaaactgctggaggtgctgtctggggagaga
ctgcccaagcccaccaggggacggatgcgtatccactgccttgagaatgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggaaaacatgggctcacatgacatcgtt
gacggcaaccaccgcctcaccctgggcctcatctggaccatcattctcaggttccagatc
caggacattagtgttgagactgatggagacaacaaggagaagagatcagccaaggacgcc
ctgctcctctggtgccagatgaagactgctggctatccaaacgtgaacattcacaacttc
agcaccagttggcgagacggcatggcattcaatgccctcatccataagcacaggccagac
ctgattgactttgacaagctgaaaaagtccaatgcccaccacaacctgcagaatgccttc
aatttggctgagcagcatctggggcttaccaagctcctggacccagaggatatcagtgtg
gaccaccctgatgagaagtctgtcatcacatacgtggtgacatactaccactacttctcc
aaaatgaaggccctgaaagtggaggggaaacgtattggaaaggtactggacaatgccatt
gagacagagaagatgattgagaagtacgagtctctggcctcagacctgctggagtggatt
gagcagaccatcatcatcctcaacaatcgcaagtttgccaactctttaaacggggtgcag
cagcagcttcaagccttcaacacatatcgcacggtcgagaaaccccctaagtttactgag
aagggcaacctggaggtgcttctgtttaccatccagagcaagatgagggccaacaatcag
aaagtctacatgcccagggagggcaaactcatctctgacattaacaagacctgggagaga
ctggagaaggcagagcatgagcgggagctggctctgaggacagagctgattcgacaggag
aaactggagcagctggctcgccgctttgaccgcaaggctgccatgagggagacctggctg
agtgagaaccagcgcctcgtctcacaggacaactttggcttcgaccttccagcggtggac
gcggccaccaagaagcatgaggccatcgagacggatattacggcttacgaggagcgtgtg
caggccgtggtgtccgttgctaaggagctggaggcagagaaataccacgacatcaaacga
atcgcagcacgcaaggacaatgtgatccggctgtgggagtacctgctggagcttctgaag
gcgaggcgccagcgcctggagatgaacttgggtctgcagagggtcttccaggagatgctt
tacatcatggactggatggacgagatgaagatgatgctactgtcccaggactatgggaag
catctgctcggagtggaggatctcttgcagaaacatgccctggtggaggctgacatcggc
atccaggctgaccgagtcaaagctgtcaacaacaatgctcagaagttcgccatcgacggc
gatgtttacaagccctgtgaccctcaggtaatacgcgaccgcgtggcacacatggagttc
tgctaccaggaactgacccagctggctgccgagcgacgggcccacctggaggagtcccgc
cgcctctggaagttcttctgggagatggccgaggaggagggctggatccgtgagaaggag
cagatcctgtcgtcggacgagagcggcaaggacctgacgggcactgtgcgcctgctgagc
cagcaccgcgccctggaggatgagatgaatggccgtgcaggtcacctgcagcacaccatc
actgaaggccaggccatggccgacggcggccactttggcgctgccaaaatccgtgaatgc
atcaccgacctgcgggcgcagtgggcagcgttggaggagctggcggccgtgaggaaggcc
catctggaggaagcgtgtgccctgcaccagttccaggcggacgcagatgacgccgacgcc
tggaccctagatgccctgcgcattgtgtccagcggcgaggtgggccatgatgagttctcc
acacaggccctggtgcgcaaacacaaggacgccgccgccgaggtggccagctatcggctg
gtgatcgatgctctccatgagcaggcgggcgccttgcctgaggagcaggtccagtcggaa
gaggtcaagggccgcctggcaggcatagaggagcgctacaaggaggtggccgagctgacc
cggttgagaaagcaggcactgcaggacgccctggccctctacaagatgttcagcgaggcg
gacgcctgcgaggtgtggatcgatgagaaggagcagtggctcaacggtatggagatccca
gagaagctggaagacctagaggtcattcagcacaggttcgagagcctggagcctgagatg
aacaaccaggcgtcacgcgtcgctgttgtgaaccagattgccaggcagctgatgcacaat
ggacaccccagtgagaagaacatcaaagcccagcaagataagctcaacaacagatggagc
cagttccgggatctgtcggaccagaagaaggagtctctaatctcggcgctgggtgtgcag
aactaccacctggactgcaacgaaaccaagtcatggatccgcgagaagacgaaggtcatc
gagtccacccaggagctgggcaacgacctgacaggtgtcatggcgctgcagcgtaaactc
actggcatggagcgtgacctggttgccatcgaggacaagctgggcgacctgcgctgcgag
gcagagcggctggccggcgagcacccagaccaggccaaggccatcaagggccgcctggcc
gagatcactgccgtgtgggaggagatgaaggccacactgcgtaatcgcgaggagtccctt
ggtgaggccagcaagctgcagcagttcctgcgcgagctggatgacttccagtcgtggctg
tcacgcacacagacagccatcgcctcagaggagacgcccaacacgctggccgaggcagag
aagttgttagcgcagcacgagggcatcaagaacgagatccgcaactacgagaaggactac
cagaagatgcgcgacatgggcgagatggtgacccggggccagaccgatgcccagtacatg
ttcctgaggcagaggctacaggccctggacacgggctggaatgagctgcacaagatgtgg
gagaaccggcaggacctgctgtcccagtcccacgcctaccagctgtttctcagggacacc
aagcaggccgaggccttcctcaacaaccaggagtacatgctggcccatacagagatgccc
actacgcttgagggggctgaaggagccatcaagcagcaggaggacttcatgaccaccatg
gacgccaacgaagagaagataaatggtgtggtggaggctggcaggcgtctggcgagtgat
ggcaacatcaatgccgatcgcatccaggagagagcgatgtctattgacgacaggcataag
aagaaccgcgaggctgctctgggcttactgatgaggctgaaggataaccgggaccttcag
aagttcctacaggattgccaggagctgtccctgtggatcaatgagaagatgctcacggca
caggacatgtcgtacgacgaggccaggaacctccacagcaaatggctcaagcatcaggcc
ttcatggccgagctgcagtccaacaaggagtggctggacaaaattgagaaggatgggatg
cagctggtgttggagaagcctgagacagagtcggtggtcaaggagaagctctcagccctc
cagaagatgtgggaagtgttggagtccaccactcagaccaaagcccagtgcctgtttgac
gccaacaaggccgagctgttcacacagagctgtgctgacttggacaagtggctgggtggc
ctggagggccagattcaatcggacgactatggcaaagacctgaccagcgtcaacatcctg
ctcaaaaagcagcagatattggagaaccaggtgggggtccgtcagagggaggtggtggag
ctgcagagccaggcactggtcctcagccaggaagggaaggacacagaggaggtggattgc
cagagacagatggtggagcacaagttcaaagagctgctcgacccgctgaggaagagaaaa
aacttcctggtagcctcccgtgagatccaccagttcaaccgtgacgtggaggacgagata
ctttgggtcgaagagaggatgccaattgcaacctccacagagcatggtctcaacctacag
accgttcaactgcttatcaagaaaaatcagaccttgcagaaggagatccagggacaccag
ccccgcttcgacgacattttcgagcggagcgagagcctgctgatggaggacagccttgcc
gtggaggccatccgccagcacctggccgacctgcaacagctgtggggtctgatgattgag
gagacagagaagcgtcacacccgactggaggaggcccacaacgcccagaagtactacttt
gatgccgccgaggctgaggcctggatgagcgagcaggagttgtacatgatgtctgaggag
aaggccaaggatgagcagagctctgtagccatgctgaagaagcaccagattgtggaacag
tcggtggaggactacgctgagacagtccatcagctctccaagaccagcagaggcctgaca
gctgcaggacatccagagagtgagaggataggcatgcgtcagtctcaagtggacaagctc
tatgccggcatgaaggacctgtctgaggagaggcggggaaaactggatgagaggtttcgc
ctgttccagctcaaccgcgaggttgacgacttggagcagtggattgctgagcgggaggtg
gtggccggatctcacgagctgggacaggactacgagcatgtcactatgctccaggagcgc
ttccgggagtttgcccgcgacacaggcaacatcggccaggagcgtgtggatgccgtcaac
cgcctgtccgacgagctgattaatgcgggccatgcagatgccgccacggtggctgagtgg
aaggacggcctcaacgaggcttgggctgacctgctggagctcattgacacgcgcacgcag
atcctggccgcctcctatgagctacacaagttctaccacgacgccaaggagatcctgggc
cgcatcctggacaaacacaagaagcttcccgaggaggtgggtcgtgaccagaacacggtg
gagacactgcagcggatgcacaccaccttcgagcacgacatccaggccctgggaacacag
gtgaggcagctgcaggaggatgccgtccgcctccagtcggcctacgctggcgacaaggca
gacgacatccagcggagggagagtgaggtgctggaggccttgaataccctgctggaggcc
tgcgatgtccgcagagtccacctcctggacacaggcgacaaattccgcttcttcagcatg
gtgcgcgacctcatgctgtggatggaggacgtcatccgtctcattgaagcccaggagaat
ccaagagacgtgtcctctgtggagttgttgatgaacaaccaccagggtatcaaggctgag
atcgacgctcgcaatgacagcttcaccgcttgcattgagttgggcaagtctctgctagcc
agaaagcactatgcatcagaggagatcaaagataaattactacagctgatggacaagagg
aaagacatgattgacaagtgggaggaccgacgggagtggttaagactgattttggaggtt
caccagtttgggagagatgcaggggtggcagaggcgtggctgctgggacaggaaccatac
ctgtttggccgggagttggggcagagcgtggacgaggtggagaaactgatcaagaggcac
gaggcattcgagaagtcggccgctacttgggaggagcgcttctcagcgctggagaggttg
actacgttggagttattggaagtgagaagacagcaagaggaagaggagaaaatgcgaaaa
accccttcgccggagcctttaccggcgcaggactcaccactgcagagtggagtagagaac
ggactgcagaatggactgccctcagaccaggattctccacagaatggcgtggacagagtt
gagatcatgaatggagtggcggagcagaactcaaaggacctgagccccattccctcaccc
acagccagccggcggggcaagggcagcctgtcctccacgttgctgacccagaaccacgat
tcgcctgtggctcagctggagggcttcctgcatcgcaagcatgaatgggagggacacaac
aagaaggcctcaagcagatcctggcataacgtgtactgcgttatcaacaatcaggaaatg
ggcttctacaaagacaacaagggtgctggtcaaggcatcccctaccacaatgcgattccg
atcagtctaatgggggctgtgtgtgatgtggccatggactacaaaaaaaaaaagcatgtc
ttcaaactcagagttgctgatggaaatgagtatctcttccaagccaaagaagaagaggag
atgagcacatggatccaggccattctgaatgcggggacacctgacaaggtatcgattacg
cccagcaaccagagcactccagcgtcgagccgagcccagaccctgcccgtcaccctcacc
accgaatccagcccgggcaagcgggagaaagacaaggaaaaggacaaggaaaagcgattc
agcctctttagcaagaaaaaactataa
DBGET
integrated database retrieval system
