Salmo trutta (river trout): 115183993
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Entry
115183993 CDS
T08542
Name
(RefSeq) MHC class II transactivator-like
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
stru01001
]
115183993
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
stru04054
]
115183993
Enzymes [BR:
stru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
115183993
Protein kinases [BR:
stru01001
]
Serine/threonine kinases: Other
TAF1 family
115183993
Pattern recognition receptors [BR:
stru04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115183993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_14
AAA_16
nSTAND_NTPase5
LRR_4
nSTAND3
RsgA_GTPase
VapE-like_dom
ABC_tran
DUF815
Motif
Other DBs
NCBI-GeneID:
115183993
NCBI-ProteinID:
XP_029600851
LinkDB
All DBs
Position
Unknown
AA seq
1225 aa
AA seq
DB search
METLDSRQTGARMQDVDIMDLLPSPTPEVEDFLPELDLEVEDFLGELWDFQFDFNDAVFD
LDFNVDIQTGEVAIPTAVAEPGSQKQNCKIRREPGDGQRKRRETEPGDGQRKRRETEPGD
GQRKRETEPGDGQRKRRETEPGDGLRKRETEPGDGQRKRAKRRETEPGDEQRKRRETEPG
DGQRKRAKRRETEPGDGQRKRRETEPGDGQRKRETEPADGQRKRETEPGDGQRKRAKRRE
TEPGDGQRKRRATEPVDGLMKRETQTDSPIRGGAGSPPLSAVTLSPPPPPPLPPARLLQI
APSLLYIPGFGTATFVSSCSNGSELQLVQAPVFSFSRPPTYILSVVSSPSLSPRPVDVLP
LSPVDSAVAPDTMCSYPPGSLSDCASQALSPPSASPLSPRTEEYIHQAKAHLRGMCQEME
AGLSLASHYVDVRLVQRQILIGSGKNGSKCLEKDLVAIGDGERRRDSLARSQVFESSAGA
KPKRSVVLLGNAGMGKSTLIKKLCVDWSDGLLPQFDFVFLLDGKALTLPPEPTYSLQSLL
LHHSSSSSPIPSTCPHHRDVFNQVLSVPERVLVIFDGFEVVRDLEGLLQCPADDSKGETY
SVRQLFSGLLQRKLLPGCSLLLSARPRGTVSGLLRRPDSLLELSGFSPPDIERYLGQYFS
GQSLEVPTSDPASDPVPDPIPDPIPAPVLAPVPVLAPAPVLAPEEGEREREEKREEGEKE
REEENRCVLSELSGLAWQGVKGHSSLLTLTLENTGDVRLRLFGLRTGLVHSHWLREMQDR
HCDDDGDDVNSDNILSWAHPFLQSFLGGAHLSVSSCVSDRALLAQILPQPRGRRRPQGEC
LDLAQRFAVGLLFRNKAELRDLAALDTGAMKAVMAKRAAVISHLENLPRGDLSPARLLEA
CHCVYETGDVHLVRHLVRNLPEVLSFQGVPLCPADGFVVWNLLDRCRTLRRRFCLGLEDT
GLRMTGLKLLTGLNNIHSYRACIADTITLWEELEQSGEEELLKAAVSKLTLNPFRATQVS
QVQHLSTLVNIHTSRRLSESLSDGVLGEGIPAVRDLHKLEFELGPVNGPLALPKLLELLP
ALHSLHHLDLENSKLGDSGAQGLAEAVVSLSSLQIINLSQNCIGDQGIGSLAPALSTLSS
LHCLSLYSNVISDGGAESLAAVLPQMTSLSDLDVKYNSFTVLGAQSLSSSLRDCPWIKSL
GMWNVCIPYGVLERLQQQDPRIQLL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggagactctcgattcccgccagacaggtgccaggatgcaggatgtggacattatggat
ctgctcccctcccctacacctgaggttgaagactttctgccagaattagacctggaagtc
gaggattttctcggggaactctgggattttcagtttgacttcaatgatgcggtgtttgat
ctggacttcaatgtggacatacagactggtgaggttgccataccgacagcggtggccgag
ccaggcagccagaaacagaactgcaagataaggagagaacctggtgacggacagaggaag
aggagagagacagaacctggtgacggacagaggaagaggagagagacagaacctggtgac
ggacagaggaagagagagacagaacctggtgacggacagaggaagaggagagagacagaa
cctggtgacggactgaggaagagagagacagaacctggtgacggacagaggaagagagcg
aagaggagagagacagaacctggtgacgaacagaggaagaggagagagacagaacctggt
gacggacagaggaagagagcgaagaggagagagacagaacctggtgacggacagaggaag
aggagagagacagaacctggtgacggacagaggaagagagagacagaacctgctgacgga
cagaggaagagagagacagaacctggtgacggacagaggaagagagcgaagaggagagag
acagaacctggtgacggacagaggaagaggagagcgacagaacctgttgacggactgatg
aagagagagactcagacagattctcccatcagaggtggtgctggctctcctcccctctcg
gccgtgactctctctcctcctcctcctcctcctcttcctcctgccagacttctccagatc
gctccctctctcctttacattcctgggtttgggactgctactttcgtctcttcgtgtagc
aatggctcagagctgcagctggttcaagctcctgttttcagcttctcaagaccgcccacc
tacatactgagtgtagtgtcttctccctctctgtctcctcgacccgtcgacgtcctacct
ctctctccagttgacagtgcggtagctccagataccatgtgttcatatcctcccggatct
ttgtctgactgtgccagccaagccctgtctcccccctccgcctcccccctctcccccagg
acagaggagtacatacaccaagccaaggctcacctgaggggaatgtgccaggagatggag
gcgggccttagcctggcgtcccactatgttgacgtgcgattggtccagaggcagatcctg
attggctcagggaagaacggcagcaagtgtctggagaaggatctggtcgctatcggagac
ggggagaggaggcgggactcgttggccaggagtcaggtgttcgagagctccgccggggcg
aaacccaaacgttccgtcgtgttgctaggcaacgccggcatgggcaaaagcacgctcatc
aagaagctctgcgtcgattggtccgacggcctactgcctcagtttgactttgtgttctta
ttggacggtaaggctctgaccctcccccccgagccgacctatagccttcagtccctcctc
ctacaccactcctcctcctcctcccccattccctctacctgtccccaccaccgggatgtc
ttcaatcaggtcctctctgtcccggagcgtgtgcttgtgatattcgacggcttcgaggtg
gtgcgtgacttggaggggctgctgcagtgtccagcggatgacagtaaaggggagacctac
agcgttagacagctgttctcaggcctgctccagaggaagctcctaccaggctgctctctg
ctcctctctgcccgaccacgaggcaccgtcagtgggctgctgagacggcctgacagcctc
ctggaactctctggcttctcccctccggatatagagagatacctgggacaatacttctct
ggacagtccctagaggtcccaacctcagacccagcctcagatccagtcccagatccaatc
ccagatccaatcccagccccagtcctagccccagtcccagtcctagccccagccccagtc
ctagccccagaggagggagagagagagagagaggagaagagggaggagggagagaaagag
agagaggaagagaacaggtgtgttctatctgagttgagcggtctggcttggcagggggtt
aaaggtcattcgtctctcctgaccctgaccctggagaataccggcgacgtcaggctgaga
ttatttggcctgaggactggactggtccattctcactggctgagggagatgcaggacaga
cattgtgacgatgacggtgacgacgtgaattctgacaacatcctgtcctgggcccaccct
ttcctgcaaagcttcctgggcggggcccacctgtccgtctccagctgtgtgtctgaccgc
gctctgctggcccagatactcccacagcccagggggaggcgacggcctcagggagagtgt
ctggaccttgctcagcgattcgctgtcgggctgcttttccggaacaaggcggaactccgt
gatctggccgccctggataccggcgccatgaaagcggtgatggccaagcgagccgctgtg
atatcacacctggagaaccttccccgcggcgacctgagccccgcccggctcctagaggcg
tgtcactgtgtttacgagacaggcgacgtccacctggtcagacacctggtacggaacctt
cctgaggttctgtcgttccaaggggtcccgctgtgccccgctgacggcttcgtggtgtgg
aaccttttggaccggtgtagaaccctgaggaggaggttctgtctggggctggaggacaca
ggactgaggatgactggactaaaactactgacaggtctcaacaacatacactcatacagg
gcgtgtatcgctgacaccatcactctgtgggaggagctagagcagagcggggaggaggag
cttctgaaagcggctgtgtctaagttgacccttaaccctttcagagccacgcaggtgtcc
caggttcaacacctgtctacactggtcaacatacacacaagcaggagactgtctgagagc
ctatcagacggggtcctgggggagggtatacctgcagtcagagatcttcacaagctggag
tttgagttggggccagtgaacggccctctggctctccctaaactcctggagctgctgcca
gccttgcacagtctacatcacctggatctggagaacagtaagctgggggacagtggagct
cagggtctggctgaagctgtggtgtctctctcctctctgcagattatcaatctgtcccag
aactgtataggagaccagggaatagggagtctggctcctgccctgtctaccctctcctca
ctgcactgtctcagtctgtacagtaatgtgatatctgacgggggtgctgagagtctggct
gctgtcttacctcagatgacatcactcagtgacctggatgtcaagtacaacagtttcaca
gtcctgggagctcagagtttgtcttccagtctgagggattgtccatggatcaagagtctg
gggatgtggaatgtgtgtattccctacggtgtgttagagagactgcaacaacaggaccca
cggatacagctgctctag
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