Salmo trutta (river trout): 115184552
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Entry
115184552 CDS
T08542
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115184552
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
General mRNP proteins
115184552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
RSRP
Motif
Other DBs
NCBI-GeneID:
115184552
NCBI-ProteinID:
XP_029601263
Ensembl:
ENSSTUG00000031439
UniProt:
A0A674BP13
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MADDFDIEAMLEAPYRKDEIKPSSPNGHEERSKKKKKSRSRSKDRKRSKSRDRKKSHDHK
RSRSRERKRSRSKERRRSRTRSRERSGRYRDHKTTFSGPKFNGGSRGKIGPPPVIKLSRR
RSRSRSPFKKEKSPVRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVR
MISDRNSRRSKGIAYIEFVEANSVPLAIGLSGQRLLGVPIIVQASQVMAEKNRAAAMANN
LQKGNAGPMRLYVGSLHFNITEEMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDA
ECAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDSDELERTGIDLGTTGRLQLMA
RLAEGTGLQIPPAAQQALQMSGAIAIGAMAAVSAAMNPAMNMNMNMNMNTAMNLPSQPLA
THCFQLSNMFNPQSEDDPGWDVDIQHDVIEECNKHGGVVHIYVDKNSTEGNVYVKCPTIP
AAMAAVNALHGRYFAGKMITAAYVPLPTYHNLFPDSVTATQLLIPPARR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgactttgatatagaagcaatgcttgaggctccgtatagaaaggatgagatc
aagcccagtagtcccaatggccatgaggaacgcagcaagaagaaaaagaagagcaggagc
cgaagcaaagaccggaagagaagcaagagccgtgatcgcaagaagagccatgaccacaag
aggagccgcagccgcgagcgaaagcggagccgcagcaaggagaggcgccggagccgcact
cggagcagggagcgcagcggccgctacagggaccacaagactaccttctctgggccgaaa
tttaacggtggttccagagggaagattggccctccacctgtcatcaagctaagccgaagg
cgttccagaagccgaagccctttcaagaaagagaagagtcctgtgaggcagccaattgac
aacctgactccagaggaaagggatgctcgcactgtgttttgcatgcagctggcagccaga
atccgtccacgagacctggaagagttcttctctgcagtgggaaaagtgagagatgtgcgc
atgatctctgacagaaattcgaggaggtcgaaggggatagcttacattgagtttgtggag
gccaactctgtgccgctggctataggattgtctggtcagcgacttctgggggtgccaatc
attgttcaggcctcgcaggtaatggctgaaaaaaacagggctgctgccatggccaacaac
ctgcagaagggcaacgctggcccgatgaggctctacgtcggatccttacactttaacatc
acagaggagatgctgagaggaatttttgagccttttggaaggattgagagtattcagctc
atgatggacagtgagactggaagatctaaaggatatggcttcatcactttctcggacgca
gagtgtgccaagaaggccctggagcagttgaacgggtttgagctggccggccggcccatg
aaggtgggccatgtcacggagcgcacagatgcctccaccgccagttcattcctggacagc
gacgagctggagaggacgggcattgacctaggcacaaccgggcgtctgcagctcatggcc
agactggctgaaggcacgggactgcaaattcctccagccgcacagcaagccctacagatg
agtggggccattgctattggtgccatggctgctgtatcagctgccatgaatcctgctatg
aacatgaacatgaatatgaacatgaatacagctatgaacttgccatcccagccacttgct
acacactgtttccagctgtctaacatgttcaaccctcagtctgaagatgacccaggctgg
gatgttgacattcagcatgatgtcattgaggaatgcaacaaacatggaggagttgtgcac
atatacgtcgataagaattccactgaaggcaacgtgtatgtgaaatgtccaaccattcct
gctgccatggctgcagtaaacgcattacatggtcgatattttgcaggtaaaatgatcaca
gcggcatacgtccctctcccgacatatcataacctttttcctgattctgtgacagctacc
cagctcctcatccctcctgctcgccgatga
DBGET
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