Salmo trutta (river trout): 115185012 Help Entry 115185012         CDS       T08542                                  Name (RefSeq) protocadherin-16-like   KO K16507   protocadherin-16/23 Organism stru  Salmo trutta (river trout) Brite KEGG Orthology (KO) [BR:stru00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:stru04515]     115185012 Cell adhesion molecules [BR:stru04515]  Cadherins   Cadherin related    115185012 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_3 Cadherin_2 Cadherin_pro TMEM154 CADH_Y-type_LIR LapA_dom MSA-2c EphA2_TM Motif Other DBs NCBI-GeneID:  115185012 NCBI-ProteinID:  XP_029601474 Ensembl:  ENSSTUG00000046257 LinkDB All DBs Position Unknown AA seq 2075 aa AA seqDB search MEESQPGSVLGTVTAKDPDEGENGTLHYSLSGSRVECFSLNPSTGELRFSSSLRHSETVD EYNLTVSASDLGTPPHTSTCPLRIQVVNSSKSSAKNTLSMTLNSVEGIAPGSVIGSVRSH DQRDTLSLDGQVTYVVVGGTDRKGTFMVDRVTGDVYLVRELDYEEGDRYTLHVEVSDFTL AYPSSHRVQLDINVQDSNDHAPQFTEDPVTIVIPENTQPGVSIYTFQAADKDGSGPNSEL LYSIQHRWPDSLHLLTLNPSTGVLTLGQKLDHETTSSLYLVVRATDQAEDVSARRWGSVT ARVFVTDDNDNAPVFSSSSAVSVMEDQPVGFVVVYVMARDEDEGENGRLSYSIQLGNSDG RFSLNPNTGSLSILKALDREDQEVFNLTIIAEDHGMPQLSTSQVLSVHVIDVNDEPPVFQ GEELEAEVRENQEAGTTVITVTATDRDQGSNGQVTYGGVTEEGFTINPVTGVISTTKPLD RETQDHYTLTVYARDGGLPPNFAKVVVRVLVQDENDNVPVFARPWYGLEVPEGQSPMELC IVRAADADTGPAGDIEYRITAGDPDGDFQLHVNSGALSTSRPLDRELRAGYNLEVVALDH GSPALSSTATVEVTVLDVNDNSPAFSSSSYTVDVSEDAAQGTPVLEVTATDADEGENGKV LYFLSHEARGAFTVDENTGRITTASPVDREKRASYSFHVFAVDLSPAEPRNTSAQVTVTI LDINDNAPFFIQDPLVVEVSASQSHRVLATMRAEDKDFGANGSVFYRFAGPVRGFSINSL TGEIQGTEGIDRLNQAQRTLMVEAMDQGTPAQSSLGVVVVYVKEQVYTGIRFSRNARDVS IQENAAKGTAVAQDQAQYPDGTRRGISYSLFSGNRLQAFSIGTSTGEIWVQRSLGLDFED TPRLRLVVKAETASSSSFMAVNLILQDINDNLPRFQLQNYVAYMREAQGYDMPIIQVVAE DVDQGQNGQVTYSIQSSGGMSGLFKIDPVTGSITTAAIMDREIWTQTRLVVTATDRGSPR LAGSATLTVIIVDLNDNSPTIPLPREVRIPENTLIGTEITLVTGNDVDSSPALSYSLQLD GSTQGKFGIHRYSGGVSLTAPLDYEDRTWYTLIVMATDSQHQTEANITILVEDVNDNAPA FTHDLYQVTLPEHSPPGSPVVTVTATDRDSGENGKVTYRVTSSTQGGFYVDPSNGTLFIR ERAEFDPENPSVSVVIAACDGGSPPLSSVTTVQVQLSDVNDNAPVFHQSEYRATVLEDSI PGATILTLEAMDADFSRDNCGFDFTIANGNTGNVFQIESSVRFLEGRGFQTVGTLLLAEV LDFEAVPLYNLTVVVSDRGVPQRSSSVAAVITVGDVNDNPPAFGRAEYAVSLSEGAGAGT EIIRLTATDPDSAPNAEVQYSISSGDEMDLFTIDQWTGALRLQRQLDREHQSSHVVIVQA SDGHGHVALTPISVEVKDVNDNSPFFPIETLTASIRENQPVNSAVTILHAIDHDTGMYGQ LRYYMVERGQGSGVTGREAFTVDQSSGEVRAKMTFDFEKVNSFNFVALAMDAGNHSATVT VQVYVTGEDEYDPLFVSPEFSFEVPEGAKRGQSIGQVQANDEDGGVDGIVLFSLPSSSLY FDVNKTTGVVFLKMDGSSSRSSSSGLGGRSKREARTMTLDVHAHSPLDTSRVTTAQLTID VTNTSFGLGADLNVLLIIIIAVSLGVVVLLVVMAVVIFLIKSKRRRKNKGRDNSAVASGT SLQKLDDSKSGGSERIYHQTLPGYAGDQGGAGAGPYPRGGSLDPSHSSGRGSAEAAEDDE IRMINEYPRVASISSSMQEHISARGPDSGIQQDADQLSDISCEPAALEGSTWFKGKKLGG SLSGTMLSGQLPVYRDELGGGYLGVGRGLNISHPKDYAFPEDGKPSVDGSLTAIVASDEE LRGSYNWDYLLNWCPQFQPLANVFTEIARLKDETAPQNQTNPRQPFQPKAKTDPKPRIDP PPLITAVAHPGAKSVPPKVPVIGRTFPHLATLRRSPISHEGSISSAAMSPSFSPSLSPLA ARSPAVSPFGVTQGPLTSMISTREPSLDPDHEMRI NT seq 6228 nt NT seq  +upstreamnt  +downstreamnt atggaggaatcccagcctggctcagtcttggggacagtaacagctaaagatcctgatgaa ggagagaacggaacactccattactcactgtcaggttccagagtggagtgtttctcattg aacccctctacaggagagctacgtttctcctcctctctgagacacagtgagacggttgat gagtacaacctgactgtgtctgcttctgacctcggcacacctccacacacctctacctgt cccctacgcattcaggttgtgaactccagtaagtcttctgcaaagaacactctctccatg actctcaactcagtggagggcatcgccccaggctctgtcattggctctgtccggtcacat gaccagcgtgacacgctgtcgttggacggccaggtgacgtacgtggtggtgggcgggacg gaccggaaggggacgttcatggttgaccgggttacgggagacgtgtacctggtcagagaa ctggactatgaggaaggggataggtacactctgcatgtggaggtatcagatttcacgctg gcgtaccccagcagtcacagagtacagctggacattaacgtccaagacagcaatgaccac gccccccagttcaccgaggaccccgttaccatagtgataccagagaacacccagccggga gtctccatctacaccttccaggctgctgataaggacggcagtggtcccaacagcgagctg ctttactcgatccaacaccgctggcctgactcccttcacctcctgacccttaacccttcc actggggtcctgaccttgggtcagaagttagatcacgagaccacgtcctccctctacctg gttgtcagggcgactgaccaggcggaggacgtgtccgcgcggcgctgggggtcagtgacg gcccgggtgtttgtgacggacgacaatgacaacgctcccgtgttcagctcatcctcagcc gtcagcgtcatggaggaccagcctgtcgggttcgtggttgtgtacgtgatggctcgtgac gaggacgagggagagaacggacgactgtcctacagcatccaattagggaacagcgatgga cgcttcagcctgaaccccaacaccggctctctgtccattctgaaggctctagatcgtgag gaccaggaagtgtttaacctgaccatcatagctgaggatcatgggatgcctcagctgtcc accagtcaggttctgtctgtccacgtgattgatgtgaacgatgagccgccggtgttccag ggtgaggagctggaggcggaggtcagagagaaccaggaagcgggaaccacggtgatcacc gtcacggcaacggacagagaccaaggttctaatggccaggtgacatatggaggtgtaaca gaggaaggcttcaccatcaaccctgtgacaggggtcatcagcactaccaagcccctggac agagagactcaggaccactacacactcacagtgtacgccagggacgggggcctgcctcct aactttgccaaggtggtggtgcgtgtgttggtgcaggatgagaacgacaacgtgccggtg ttcgccaggccctggtacggcctagaggtccctgagggccagagccccatggagctgtgt attgtcagggctgctgacgcagacactggccccgctggagacatagagtacaggatcact gctggagacccggacggagacttccaactccatgtgaattcaggggccctgtccacgtct cgtcccctggatcgggagctacgggcagggtacaacctggaggtggtggccctggaccat ggttctcctgctctgagcagcacagccacagtggaggtgacggtgctggatgtaaatgat aacagtccagccttcagcagcagcagctacaccgtagacgtctcggaggacgctgcccag ggaactccagtcttagaggtgacggccacagacgcagacgagggggagaacgggaaggtt ctgtatttcctgagtcatgaggcgaggggcgctttcaccgtggacgaaaacaccgggcgt attacaacggcatcgccggtggaccgagagaagagggcgtcgtacagcttccatgtgttc gctgtggatctgtcacctgcagagcccagaaacacctcagctcaggtaaccgtgacgatc ctggacataaacgacaacgctccattcttcatccaagaccccctcgtcgtcgaggtctcg gccagccaatcacatcgggtcctggccaccatgcgggccgaggacaaggactttggcgcc aacggctctgtgttctaccgtttcgccggtccggtgaggggtttcagcatcaactcccta acgggggagatccaggggacggaggggatagacaggctgaatcaggcccagaggaccctc atggtggaggctatggaccagggaaccccggcccagtccagcctgggggtggtggtggtc tatgtgaaggaacaggtgtatacaggcatcaggttctcaaggaacgccagagatgtcagc atacaggagaatgccgccaaaggtacggctgtagctcaggatcaggcccagtaccctgat ggaacaaggagagggattagctatagcctcttctctggaaacagattacaggccttcagc atcggcactagcacaggtgaaatctgggttcagaggtcgttgggtctggactttgaggac actccccgactccgcctggtagtgaaggctgagacggcttcgtccagctccttcatggcc gttaacctgatcctgcaggacatcaatgacaacttgccacgcttccagctccagaactat gtagcctacatgagagaggcccagggttacgacatgccaatcatacaggtggtggcagag gacgtggaccaggggcagaacggtcaggtgacctactctatccaatcatcaggaggcatg agcggcctgttcaagatcgaccctgtcacaggaagcatcaccaccgctgccatcatggac agagagatctggactcagaccaggctggtcgtcacagcgacggacaggggcagcccgcga ttggccggttcggctacactcacagtgatcatcgtagacctcaacgacaacagtccaaca atccctctgccccgggaggtccgcattcctgagaacaccctgatcggcacggagatcacc ttggtaacaggtaatgacgtggactccagcccggccctgtcctacagcctccagctggac gggtcgacccaggggaagtttgggatccatcgctacagtggaggtgtgtctctgaccgcc cctctggactacgaggacaggacctggtacacactgatcgtcatggcaactgactcccag caccagactgaggctaatatcaccatactggtggaggacgtcaatgacaacgctcctgcg ttcacacacgatctataccaggtaacactgccagaacattccccgccaggcagtcccgtt gtcacggtgacggcgactgaccgcgattcgggggagaatggaaaggtcacctacagagtg acgtcatcaactcaaggtggcttctacgtcgaccccagtaatggcaccctgttcatcagg gagagggcagagtttgacccagagaacccgtccgtcagtgtggtcatcgcagcctgtgac gggggatccccgcccctctcctccgtcaccacagtacaggtccagctatcagacgtcaac gacaacgctcctgtcttccaccaatcagagtacagggcgacggtgttggaggactccatc cccggggcgaccatcctgaccctggaggccatggacgctgatttctctcgggacaactgc ggcttcgacttcaccatcgccaatggcaacactgggaacgtcttccaaatcgagagcagc gtgcgcttcctggaggggcggggcttccagaccgtagggaccctcctattggccgaggtg ctggacttcgaggccgtgcccctctataacctgacggtggtggtgtcggacagaggggtt ccacagcggagttctagcgttgccgcggtgataaccgttggcgatgtaaacgataacccg ccggcgttcggcagggcggagtacgctgtgtcactgagtgaaggagcgggcgccgggaca gagataatacgactcactgccacagacccagactcggcccccaacgcagaggtccagtac agtatcagctcaggcgatgagatggacctgttcacgatcgaccagtggaccggggcgctt cggttacagcgacagctcgaccgcgagcaccagtcctcccacgtggtcatcgtccaggcc tcggatggccacggtcacgttgccctgaccccgatcagcgtagaggtcaaagatgtgaat gataacagtccgttcttccccatcgagactctgacggctagcattagagagaaccagccg gtcaactcagccgtgaccatactccacgccatagaccacgacactgggatgtacggccag ctgagatactacatggtggagcgaggtcaagggtcaggagttacagggcgagaggccttc accgtggaccagagttcaggagaggttagggctaagatgacttttgactttgagaaggtc aactcatttaatttcgttgctctggcgatggacgccggtaaccattcggccacggtgacg gtccaggtgtacgtgaccggtgaggatgagtacgacccactcttcgtctccccagagttc tcctttgaggttccagagggggcgaagaggggccagagcattggacaggtccaggcaaac gacgaggacggaggtgtagacggtatcgtcctcttctcgctcccaagctcctccctgtac tttgacgtcaacaaaacaaccggggtggttttcctcaagatggacgggtcttctagtcgc agcagcagcagcgggttaggggggcggtccaaaagggaggccaggaccatgactctggac gttcatgcccacagccctctggatacgtcccgggtcaccacggcccagctgaccatcgat gtgaccaacacgtccttcggcctcggggcagacctcaacgtcctgctgattatcatcatc gccgtatccctgggggtcgtcgtgctactggtggtcatggctgtggtcattttcctgatc aagtcaaagagacgcaggaagaacaaaggacgggacaacagtgccgttgcctcgggaacc agtctgcagaaactggacgattccaaatctggaggatctgagaggatctatcatcagacg ttaccagggtacgccggcgaccaaggtggagcaggggccgggccctacccccggggaggt tcccttgacccctcacactccagcgggcgtggctcagccgaggcggcggaagacgacgag atcaggatgatcaacgagtacccacgcgtagcgtccatctcctcgtccatgcaggagcac atctcagcccgcgggccggactctggcatccagcaggacgctgaccagctgtcggacatc tcctgtgagccggccgccctggaaggaagcacctggttcaaaggcaagaagctgggaggg agtctcagtggaaccatgctgtctggacagctacctgtctacagagacgagctgggagga gggtacctaggggtggggaggggactcaatatctcccatcctaaagattacgccttccca gaggacgggaagccctcggtggatgggtctctgacagccatagtggccagtgacgaagag ctaaggggcagttataactgggactacctgctcaactggtgccctcagttccaaccacta gccaacgtcttcacagagatcgccaggctcaaagacgagacagccccacagaaccagacc aacccacgccagccctttcagcccaaagccaagacggaccccaagcctcgcatcgaccca ccgcccctcatcaccgccgtcgcccaccctggggccaagtccgtccccccgaaggtccct gtcatcggacgcaccttcccccacctggccaccttacgacggtcccccatcagccacgag ggctccatctcctcagcagccatgtcccccagcttctccccctctctctcccccctcgcc gcccgctcccccgccgtctcccccttcggagtcacccaaggccccttgacctccatgatc agtaccagggaaccttcgctggaccccgaccacgagatgaggatctga

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