Salmo trutta (river trout): 115185206
Help
Entry
115185206 CDS
T08542
Name
(RefSeq) cilia- and flagella-associated protein 54-like
KO
K25553
cilia- and flagella-associated protein 54
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115185206
Cilium and associated proteins [BR:
stru03037
]
Motile cilia and associated proteins
Sperm associated proteins
115185206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
PM2_P3
Motif
Other DBs
NCBI-GeneID:
115185206
NCBI-ProteinID:
XP_029601575
LinkDB
All DBs
Position
Unknown
AA seq
1889 aa
AA seq
DB search
MEPLPASFYGNMHKRNPVISAFDGDIKNFMSFMKRISTLPTYDHNSYARGAKTLFEIWNK
YKPRLPTNYYEEHMLQMADFLFGIKLYRLGLWQGYCRYLQQFSTVTIEDIRDVDHFRTSF
FPKGFDTDQAKLTFRALQGCCLCAFQLERERGSQPTQKGVQRLLSILGFVRIMMQAVFPH
EHLCWLLYNGSLYIYNICRYLMSMSRAAQAEEFLLWACICLETSIPLMTARFLEWRATLY
CAVCQCYYDRQANVQAEVFARRALGKVSELGKLEEMSGLPATTETQRAYKVATIKLATMV
FKRSVYEPRREPKGLFRHKQKSNLKEIQSMPWPRTPTEQVLMELFEGNAAQFLAIVEALW
DTSRRPLQTGMPEEPEIQEVSLELMSAGISILSGIGGSTERARDESLPTCLNAVTAKFTL
MDMAAAGENKVSLDAAVKFVKLLFRYEQWDMFCILSDTLQHTLLPRMEGRSFRKSELELR
LLDSMERLMSTQKIRLNTKDDTVSEKDRHLGVVMSEEFVGLVQALYSCVCGSAQDVQPDG
DLVMDIVLYLWSKCKIIFQRAQVRHWDPIHFLGKMENLDKWVWTLSVLSEVAHVCELADT
DPMVLAEMTIRLAMVLESTADSTVHSGRKTASSEDDSVEWTPTEKNTDTLSMFKKKSTAE
QLQSVWNVVERGLEGVIRGWTRLLPCDGSAISDMVFMQKFAGPAMHSPAGGGEGERVKSP
SPSRSLLPMDLHLELLSVQHRVSLKLLNTCPAELQQHAGDSRRSMRPPGGVEIPETMANR
ARGESVLLERIRKNKISIALFLVQKALLSHRKDQNSSATKRLLEEAVVLIEKAEVEERKL
FSSSGLSERKERGGEEERNTRPPPPILLSRTYHSMTFTPAPYALEEQVCWYHIYAREAEG
INLKVRLGDSNLVGTGDEVPASGERLLQVDCLEPNQKYVFAVAAYDAGGKLVGNAIGETT
RPLLASLPLPLLNTWAHLAQAAYQTGQHALAKRACSELWSHFNQPKGLQEPGATLEGLAQ
TKLRLETLQRSSPVLLHLFLSSILMQTEIHIQEGALFCDTLSDGGPLIWGQEARLAECER
MLVAIDLALWLNDSSAALQAVVGCYGLLAPLMFHQIPAEPVVQVLMKCLVVLTEISGVVK
QKRPAITSESLLHMIACITHYVAKALRTLEKHRLAATVIEQGKKLLHDILDTVQGPSKPL
PVEPDGLLKKAGSIQGEEEQNEQMKALEGCAMKNKRTGTFMQHDSSARAVAHAHELTGQE
DPILLYPIVTNSPLKAAFEDLMKFKRKPCFMEFAVLLLQRTMQADHLELVLQWGHDIFGW
LSRRDEGLTGPKKGPGDRSTSGKELKKFSSSIMEYKKNKASTFGSDKKRKEFLQKKQLTA
LKAQNTERECKAVDTMLNQLAPLVRRHQRRRRLRQVCSEEWLWRCHLNLSIARAHLGLLR
RSLENHQGLGALQHSYSQLPPLLFSLAHSGTLVRGRNMHQHIGVPDLIPPPPKATPQPCF
RAILHKAKESGQAATTTSGEDFNTTESSEQDSEQDSPRTQPAVDSDYSEPSVMTTSPTRR
TATQLLESLNKAALHLRRAMVLAHRGGHWTTLQCVCRTLWDQGCTITLLVDRGASMEPPI
PLTLDQLYTVLTPLFELATDLVMNMMEKMQLWQVFELEDEEMEASMHFSAPLDDGTLVDL
RWIRSLTLHTLELLYLKARWETLAHLALLFNSHTRERYTHMITPILVHAQRRLLERISYF
GGPPVPQPHFIKTQNLTGEKITNKNYAGRQLLNCWTPPAVPAPRRGCNTPTNPNAELLEL
SEVRRAMCVVCVPLDVEDTLCCFREALEKGHHTLQNFQHSRTLLLLLLAHTQPCEYILSI
SLCCVFVTLAFSQSHFAHLLRPSRLILKK
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atggaaccactgccagcttcattttacgggaacatgcataaaagaaacccagtaatatca
gcgtttgatggagacataaaaaactttatgtcatttatgaaacgaattagtactttgcca
acctacgaccacaactcctacgcaagaggtgccaaaactctgtttgaaatatggaacaag
tacaaacctcgactaccaaccaactactatgaagaacacatgctgcaaatggcagatttt
ctttttggcatcaagttatacaggcttggtctatggcagggctactgtcgctacctgcag
cagttcagcactgtgaccatagaggacattagggatgttgaccacttcaggacctccttc
ttccccaaggggttcgacacagaccaagccaagctgacgttccgggctctgcagggctgc
tgcctatgtgccttccagctggagagggaaagagggagccagcccacccagaagggggtc
cagagactcctcagcatcctggggtttgtcaggatcatgatgcaggccgtgtttccccat
gaacatctctgctggcttctttacaatggttcactctatatctacaacatctgtagatac
ctgatgtccatgagccgcgctgcacaggctgaggagttccttctgtgggcctgtatctgt
ctggagacctccatccccctgatgactgccaggttcttggagtggagggcaactctgtac
tgtgctgtgtgccagtgctactacgacagacaagccaatgttcaggcagaggtgtttgca
cgacgagccctgggtaaagttagtgagctgggcaagctggaagagatgagtggtctacct
gctaccactgagactcagagagcatacaaagtggccaccattaagctagctaccatggtg
tttaaacggtcggtgtatgaacccaggagggaacctaaaggtctcttcagacacaagcag
aagagtaacctcaaggagattcagagcatgccgtggcctcgaacccctacagagcaagtg
ttgatggagctgtttgaggggaacgctgcccagttcctggcgatagtggaagcgctgtgg
gacacctcccgccgcccactacagacaggcatgcctgaggagccagagatacaggaggtc
tccctggaactcatgtctgcaggcatcagtatactgtctggaattggagggtccactgag
cgagccagggatgagagtctccccacctgtttaaatgcagtgacagccaaatttactctg
atggacatggcggctgctggggagaacaaggtgtcgttggatgcagcggtgaagtttgtc
aagctgctgtttcgatatgagcagtgggacatgttctgtatcctctctgacacactgcag
cacaccctactgcctagaatggaggggaggtctttcaggaagtcagagctggagctgagg
ttgctggactccatggagcgcctcatgtctacacagaagatcagactcaacaccaaggac
gacactgtgtctgagaaggacaggcatctgggagtggttatgagtgaggagtttgttggt
ctggtgcaggccttatacagctgtgtctgtggttcagctcaggacgtgcaacctgacgga
gacctggtgatggacatagtgctgtacctttggtctaaatgtaagatcattttccagaga
gcccaggttcgacactgggaccctatacacttcctgggcaagatggagaacctggacaag
tgggtgtggaccctgtctgtgctcagtgaggtggctcatgtgtgtgagctggctgacacg
gatcccatggtgttagctgagatgaccatcaggctggccatggtgctggagagcactgct
gactccactgtccattcaggcaggaagacagcctcaagcgaagacgacagcgtggagtgg
acacccacagagaaaaacacagacactttgtcaatgttcaagaagaagtcgacagcggag
cagctgcagtcagtgtggaacgtggtagagagaggtctggagggagtgatcagaggctgg
accagactactgccctgtgatggatcagccatctctgacatggtcttcatgcagaagttt
gctgggccggccatgcattcccctgcaggaggaggagagggagagagggtgaagagtccc
tccccgtctcgctctctgctccccatggacctgcatctggaactgctgtctgtccagcac
agagtctccctcaagctgctcaacacctgcccagctgagctgcagcagcatgctggtgac
agtaggagatctatgaggccccctggtggtgtggagatacctgagaccatggctaacaga
gccagaggagagtcagtgcttctggagcggatcagaaagaataagatctccatagctctg
ttcctggtccagaaggctctgctgtcccacaggaaggaccagaacagcagcgccaccaag
agactgctagaggaggctgttgtcctgatagagaaggcagaggtggaggagaggaagctg
ttcagctcctctggtctgtcggagaggaaggagagaggaggagaggaggagagaaacact
agacctcctcctcctatcctcctgtcccgtacctaccactccatgaccttcacccctgca
ccctacgccctggaggaacaggtgtgctggtaccatatctatgcacgtgaggctgaggga
atcaacctgaaagtcagactaggagacagcaacctggtgggcactggagacgaggttcct
gcatcaggggagcgactgctacaagtggactgcttggagccgaaccagaagtatgtgttt
gctgtagcagcctatgacgccgggggtaaactggtgggaaatgccattggagagacgacc
aggccgctgctagcctccctgcctctgccactgctcaacacctgggcacacctggcacag
gcagcgtaccagacagggcaacacgctctagccaagagagcctgcagtgaactgtggagc
cacttcaaccagcctaaaggtcttcaagagccaggggccactttagaggggctagctcag
accaagctgcgtttggagactctgcagcgctcctctcctgtcctcctccacctcttcctc
tcctccatccttatgcagacagagatccacatccaggagggtgcgctgttctgtgacacc
ctcagtgatgggggaccactcatttggggacaggaggccaggttggcagagtgtgagcgg
atgctggtggccatagacctggctctctggctgaatgacagcagcgctgccctgcaggcc
gtggtggggtgttatggactgctggccccgctcatgtttcaccagatcccagcagagcct
gttgtacaggtgctgatgaagtgcctggtggtgctgacagagatctcaggagttgtaaaa
cagaaacgcccagccatcacctcagagtctcttctgcacatgatagcctgtataacacat
tatgttgccaaggcccttcgcaccctggagaagcaccgtttggcagcaacagtgatcgaa
cagggaaagaaactcctccatgatatcctggacaccgtgcagggacccagtaagcccctt
ccagtggagccagacgggttgctgaagaaggcaggcagcatccagggagaggaggagcag
aatgaacagatgaaggctctggagggctgtgccatgaagaacaagaggactggaaccttc
atgcagcatgacagctcagccagagcggtggcccatgctcatgaactgactggacaggag
gaccccattctgctgtaccccatcgtcaccaacagccctctgaaggctgctttcgaagat
ttgatgaagttcaagcgcaagccgtgcttcatggagtttgctgtgctgctgctccagagg
accatgcaggcagaccatctagagctggtcctgcagtggggacacgacatatttggctgg
cttagcaggagggatgagggactgacagggcctaagaagggcccaggggacagatcaacc
tcagggaaagaactgaagaagttctcctcctccatcatggagtacaagaagaataaagct
agtacattcgggagtgacaagaagaggaaagagtttctccagaagaaacaactgactgct
ctgaaagcacagaacacagagagggagtgtaaggcggtggacaccatgctgaaccagcta
gcccccctggtgcgccgtcaccagcgtcggaggcgtctgagacaggtgtgttctgaggag
tggctgtggaggtgtcacctcaaccttagcatcgccagggctcacctgggactactgaga
aggagcctggagaaccaccagggccttggggccctacaacacagctacagccagctgcct
ccgttgttgttctccctggcccactctggtactctggtgagggggaggaacatgcatcag
cacatcggagtccctgacctgattcccccgccccccaaagccacgccccagccctgcttc
agagccatcctccacaaggccaaggagagcggacaggctgccaccaccaccagtggagag
gacttcaacacgacagagagcagtgagcaggacagtgagcaggactctcctcgtacgcag
ccagctgtggactcggactatagtgagccctcagtgatgaccacctccccgaccagacgc
accgccactcagctgctagagtcactcaacaaggctgccctgcacctccgcagagccatg
gtacttgcccatcgtgggggccactggacaacgttgcagtgtgtgtgtcggacactatgg
gaccagggctgtaccatcactctactagtagacaggggtgcatccatggagccccccatc
cctttaacattggaccagctctacactgtcctcacccctttgtttgagctggctacagac
ctcgtcatgaacatgatggagaaaatgcagctctggcaggtgtttgaattggaggatgag
gagatggaggccagcatgcatttctccgcccctctggatgacggtaccctggtggacctg
agatggatcaggagcctcacccttcacacccttgagctgctctacctcaaggctcgctgg
gagactctggctcacctcgccctgctcttcaactcacacacacgagagcgctacacccac
atgatcactcctatcctggtccacgctcagaggagactgctagagaggatcagctacttc
ggaggacctccggtccctcagccacacttcatcaaaacgcagaacctcactggagagaag
atcaccaataagaactatgcagggagacagctgctgaattgctggactccccctgctgtg
cctgcccccagacgagggtgcaacactcccaccaacccaaacgccgagctcctcgaactc
tctgaggtgcgccgggccatgtgtgtggtgtgtgttcctctggatgtggaggatacactg
tgttgtttcagggaggccctggagaagggccatcacactctgcagaacttccaacacagc
cgcacactgctactactgctgctggcacacacacagccctgtgagtacatcctttctatc
tcactttgctgtgtgtttgtgactctggcctttagtcaatcacattttgctcatctcctg
cgtccttctcgcctcattttaaaaaag
DBGET
integrated database retrieval system
