Salmo trutta (river trout): 115185578
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Entry
115185578 CDS
T08542
Name
(RefSeq) DENN domain-containing protein 3-like isoform X1
KO
K20162
DENN domain-containing protein 3
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115185578
Membrane trafficking [BR:
stru04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115185578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40
WD40_2
dDENN
Beta-prop_WDR75_1st
uDENN
Beta-prop_LRRK2
DUF5074
Beta-prop_Vps41
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
SPA
Motif
Other DBs
NCBI-GeneID:
115185578
NCBI-ProteinID:
XP_029601647
Ensembl:
ENSSTUG00000008235
LinkDB
All DBs
Position
3:complement(68319131..68355227)
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AA seq
1319 aa
AA seq
DB search
MLGCDSTIVSLMYRGGKMADHLPSGLLEACVVVGASGDKLKDVYQSLQQGNTTTDIFSLD
PEVLQVHVPPFVTKENADESGVPRTFSRVQCRRSFIKKKERPVVAPSGPGGAGSSEGATV
TEDVSVPKDIDLMALPQLCFPGGLQVTNEPKEERFHFLVFTDVFGNQTHGVVVQCCRPFQ
EGSVFYQNGHWSSTRTTKLYTAYAICVISKHPYYNALKDCLSCLLVQLRTCRLSEERVKE
FAAKLSLVPIPPPGQLHVVFNLRPLMIILPSREDKEHPAVDLDLHLPFLCFRSKQILQII
TGILMEQRVVFFSADWARLTLVAECFMLYIHPLHWQHPYVPILSAQMLDFVMAPTAFLMG
CHLNHFEEVAAETDDLILINIDDGTVSSSCSETVDLPDVPFASAECFTKRRKGLQLQYDL
EVCHQGAGTDVNEMRMLRRQWQQNLNWEIQKVTLELIVNMFRDVSGHLNYEHRVFNSEEF
LKTRELADQPFYKKVLETHIFHSFLKDRLNRKMDAFTRMEVNTRSETQKMKAMTDNPRRP
TMQEMARKYSSDPENRLNKRLGMSLPNLGEERHLNLLRQTSLKKIIIPESAFKIPPKPVK
IFKLPEFPPPMVHHHVQNYYGELIILLGKAIFCVPPENSTLLARYFYLRGFMNTLCSKRL
DALSDFQNLYKTDIEIFPTDLVKALVDSLQKDERSQADRRPELKRLIFKVKTDNEMVLVQ
ADDHVKKFQLPKTHMLQEDFVKRIQESGIVKDVATIHRLFEALTVGKLRLTIHRLFEALT
VGKLRLTIHRLFEALTVGQQKQIDPEVFRVFYTFWKETEVEAQDVHLPAEVIEHLDNNEC
VYKLSCSVKTNQGVGKIAMTQKRLFLLTDGRPGFIEITKFRDIKEVKISFAPFLLLRIPS
LKIKCSLRKEVFEANLKSACDLWNLMVREMWAGRTMADDHKDPQYMQQALTNVLLMDAVV
GCLQTQKAVFAASKLAYFDRVKHEAVPMMVPKTTSETLKHKINPSLDLPAPQTVHVLHYT
PGQLSYSEVDGDGNPKLWCALSGGRVVVFDAASWSMQQNCIQVGSSQLNCMLGLDQDQVW
IGSQDSIIYIIDTRSMSCNKQLTEHRHEVMDFALEESDKMSQTYSCSADGTVILWDLSTL
KVKKQFQLTCDRLMSIQLFNGTLWCCARDGIVELRKNGTPHRKMTLPEDLQNMPTEFSSL
ILFLERGQLWTSCSDSDELCLWHCKDLTKPFLRVQLQNCTGVNCMIKVKNQIWVGCSGPS
PDQCRRSGKIYIVDTESHSVEKELMAHTDSVQALCSAEGRYVLSGSACQDGKIAIWKVE
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgcttggatgtgattccaccattgtgagcctgatgtacagaggaggaaagatggcagac
catcttccctcagggttactggaagcatgtgttgtcgtcggagcctctggggataaactc
aaggatgtctaccagtctctacagcagggcaacacgacaacagacatcttttctttagac
ccagaggtcttgcaagtccacgtgcctccatttgtgaccaaagagaatgcagatgagtct
ggtgtccccagaacctttagtcgagtccagtgcagacggtccttcatcaagaagaaggag
aggccagtggtggctcctagtggccctggaggggccgggagcagtgagggggccactgtc
acggaggatgtcagcgtccccaaggacatcgacctcatggccctgccccaactctgcttt
ccaggggggcttcaagtaacaaatgaaccaaaagaagagcgttttcactttctagtcttc
acggatgtgttcggtaaccaaacccatggagtggttgttcagtgttgtagaccatttcag
gaagggtcggtgttctatcagaatggacactggtcgtccaccaggaccactaagctctac
actgcttatgccatctgtgtcatatccaagcatccttattacaatgctctgaaggactgt
ctgtcttgtttgctggtgcagcttagaacatgcaggttgtctgaagagagggtgaaggaa
tttgcagccaaactgtctctagtgcccattccacctcctggacaactacatgtggtgttc
aacctgagacccctgatgatcatactgccttccagagaggataaggaacaccccgctgta
gacctggacctccatttgcccttcctgtgctttagatccaaacagattttacagatcatc
actggtattctgatggagcagagggtagtgttcttctcagctgactgggcccgcctcacc
ctggtggcagagtgtttcatgctctacatccaccccctccattggcagcacccctacgtg
cccatcctctcagcccagatgctggacttcgtcatggctcccaccgccttcctcatgggc
tgccacctcaaccactttgaggaggtcgctgcggaaacagacgacctgatcttgattaat
attgatgatggaacagtgtcttcctcctgctcagagactgttgacctaccagacgtcccc
ttcgcttcggcagagtgttttaccaagcggaggaagggcctccagctacaatatgatcta
gaggtgtgtcaccaaggggccggcacagacgttaatgagatgcgcatgctgagaagacaa
tggcagcagaacctgaactgggaaatacagaaggttaccttggagctcattgtcaacatg
tttagggatgtcagtggtcacctgaactatgaacacagagtctttaacagtgaagagttc
ctgaagaccagagagctagctgaccaacccttctataaaaaggtcttggagacacacatc
tttcattcattcctgaaggaccgcctcaataggaagatggatgctttcacacgcatggaa
gtcaacactcgctcagagacacagaaaatgaaagcgatgacagacaaccccaggaggccc
accatgcaggaaatggccaggaagtatagcagcgacccagagaaccgtctgaacaagagg
ctggggatgagcctccccaacctgggagaggagcgccacctcaacctcctcagacaaacc
tccctcaagaagatcattatccctgaaagtgccttcaagatcccgcccaagcctgtgaag
atcttcaagctgccagaatttcctcctcccatggtgcaccaccatgtccagaactactat
ggagagttgatcatactactggggaaggccatcttctgtgttcctcctgagaactccacc
ctcctggccaggtacttctacctgcgcggcttcatgaacacgctgtgttccaagcgtcta
gatgccctcagcgacttccagaacctctacaagacggacatcgagatcttccccaccgac
ctggtgaaggcgctagtggactcgctgcagaaggacgagcgctcccaggcggaccggcga
ccagagctcaagcggctcatcttcaaggtgaagacagacaatgagatggtgctggtccaa
gctgacgaccacgtgaagaagtttcagctccctaagacccacatgctgcaggaggacttt
gtgaagcgcatccaggagtctgggattgtgaaagacgtcgccaccatccataggctgttt
gaggctctcactgtgggtaagttgagacttaccatccataggctgtttgaggctctcact
gtgggtaagttgagacttaccattcataggctgtttgaggctctcactgtggggcaacag
aagcagattgacccagaggtgttccgtgtgttctacaccttctggaaggagacggaggtg
gaggcccaggacgttcacctgccagctgaggtcatagagcacctggacaacaacgagtgt
gtctacaagctgtcctgctccgtgaaaaccaaccagggagtgggaaagatcgccatgaca
cagaagaggctcttcctgctcactgacgggaggcctgggtttatcgagatcaccaagttc
agagacataaaggaggtgaaaatctcctttgctcctttcctgctgctgaggatcccgtct
ctgaagatcaagtgcagtctgaggaaggaggtgtttgaggccaacctgaagtctgcgtgt
gacctgtggaatctcatggtcagagagatgtgggctgggaggacgatggcagacgaccac
aaggatcctcagtacatgcagcaggctttgactaacgtcttgctcatggatgctgtggtt
gggtgccttcagacccagaaggccgtatttgccgcctccaaactggcatactttgacaga
gtgaaacatgaagcagttcctatgatggttccaaagacaacatcggagacgttgaaacac
aagatcaatccatcgctagacctcccagctccacagactgtacacgtcttacactacaca
ccaggccagttgagttactcggaggtagacggagatgggaaccccaagctgtggtgtgcc
ctcagtggtgggagggtggttgtgtttgatgcagccagctggtccatgcagcagaattgt
attcaagtgggatcctcccaactgaactgcatgctgggattggaccaggatcaagtatgg
attggctcccaggattccataatttacataattgacactcgcagcatgtcctgcaataag
cagctgacagagcaccggcatgaggttatggactttgcactggaggagagtgacaagatg
agccagacatactcctgtagtgccgatggaacagtcattctgtgggacctctcaacacta
aaagtgaaaaagcagtttcaactgacctgtgataggcttatgtccattcagctcttcaat
ggaacactgtggtgctgtgccagagacggcatcgttgaactgaggaagaacggaacgcca
catcgtaagatgacacttcctgaggatctacagaacatgcccactgagttcagcagcctc
atcctcttcttagagaggggccagttgtggacgagctgttctgattctgacgagctctgt
ctgtggcactgtaaagacctgaccaagcctttcttgagggtgcagctgcagaactgtaca
ggggtcaactgtatgatcaaggttaagaatcagatctgggttggctgcagcgggccgagc
cctgaccagtgcaggaggagtgggaagatctacatagtggacacagagagccacagtgta
gagaaggagctgatggcccacacagacagtgtccaggcactgtgctctgcagagggccgc
tatgtactcagcggctccgcctgccaggatggaaaaatcgccatttggaaggttgagtag
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