Salmo trutta (river trout): 115186368
Help
Entry
115186368 CDS
T08542
Name
(RefSeq) aryl hydrocarbon receptor-like
KO
K09093
aryl hydrocarbon receptor
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115186368
Transcription factors [BR:
stru03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115186368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
bHLH_HIF1A
PAS_4
bHLH_NPAS4
PAS_9
Motif
Other DBs
NCBI-GeneID:
115186368
NCBI-ProteinID:
XP_029601891
Ensembl:
ENSSTUG00000027876
LinkDB
All DBs
Position
3:complement(70225480..70260998)
Genome browser
AA seq
966 aa
AA seq
DB search
MYAGRKRKKPQRSVKPPPEGAKSNPSKRHRERLNGELDRLASLLPYPQDVISKLDKLTIL
RLCVSYLRAKSFFNVTLQSTASQRPESNVLKKQELHVPEGEILLQVLNGFVLVVTAGGTI
FYASSTIQDYLGFHQSDVVHQSVYDIIHMEDRAELQRQLHWALNPTLTPHTGQLASDSAS
PQAVTVYKPEALPPENSTFLERNFVCRLRCLLDNSTGFLALNIQGRLKFLHGQSERTKEG
KAFPPQLALFALASPLQPPTILEIRTKNLIFKTKHKLDFTPTACDAKGKMVLGYTEAELC
NCGSGYQFIHAADMLHCAENHMRMIKTGESGMTVFRLLTKLTGWLWVQANARLVYKNGRP
ECIIASQRVLTDEEGEDNLRKRSLQLPFSYTTGEALLYNTSFPKTLVTGDSLAGDTIGSA
GNTTKNQDETLDPDSLLGSLLKQDKSVYCCSPQTQNPLQLLLKQDKSIYVCCSPHTQNQL
QLPLQLQEEVAGVPQEEVAGVPQEEVAGLPQEECGGIFSSSWQEGSILSLSERVLFKQEP
LGVGDGGGIHGFSSEDIDGDLWSFMMNLGISREDLELFQQDEMFLDVDLDAGRDGLLPDL
TDEILSYVQESLRKRSDWGQTVFSCRGAKLGDQDYSYPTTLLHQPSMEQPLTSQPHSTTV
PQWQSQIQLPVVHPLSVHHYQSPPHYPQQPIPQHCLHTQPHPQTALQATQQQQQSHLNGQ
VLPTQQQQQLCNRLKHMQVTGTGSITQRQKDIAKQQQRIPPLFNVEQPGGLQDHHGHPQH
GNLCLGEASLALPYRNQLNTLSVSRSSVLSSYVPTTGLQSQGVDGELTPQNLDELLGSLE
SSGPRPTEDGRGASQWSVVEALGVFQQQRHRPDGLAQSQATSQGWAQHAYPLAMGLSQVN
RAEWPFTTQFQNGSLKEAGPAPGPVPNPGSSRGADHGHAAAGQPKHQPPPSAESRPYPDL
PLSGFM
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaggtcgcaagaggaaaaagccccagagaagtgtgaagccacctccagaagga
gccaaatcaaacccttcgaagaggcaccgggaacgcctgaatggggagttggacaggctg
gccagtctgcttccttacccccaggatgtcatctccaagctggacaaactgaccatcctc
agactttgtgtcagctacctgcgtgccaagagctttttcaatgtgaccctacaatccaca
gcctcccagcgcccagagagtaatgttctgaagaagcaagaacttcacgttccagaggga
gagatcttactacaggtgttgaatggctttgttctggttgtcacggctggtggcacaatc
ttttatgcatcctccaccatccaggactacctgggctttcaccagtcagatgtcgtccat
cagagtgtttatgacatcattcatatggaggaccgagcagagttacagagacagctccac
tgggccctcaaccccaccctcacccctcacactggacagctggcctcagattcagcctcg
ccacaggctgtcacagtctacaagccagaggcactcccaccagagaattccaccttcctg
gaacgcaactttgtctgcaggttaagatgtctcctggacaactccactggcttcctagcc
ctgaacatccaggggcgtctaaagttcctccatggccagagcgagaggaccaaggagggc
aaggccttcccgcctcagctggctctgttcgccctggcctcgcccttgcagccccccacc
atcctggagatccgcaccaagaacttaatcttcaagaccaagcacaagctggacttcacc
cccactgcctgcgacgccaaagggaagatggtgctgggttacactgaggctgagctgtgc
aactgtggctcaggataccagttcatccatgctgctgacatgctgcactgtgctgagaac
cacatgaggatgataaagaccggagagagtgggatgacagtattcaggctgctgaccaag
ctgacaggctggctatgggtgcaggctaacgccagactggtctataagaacggacggcct
gagtgtatcatcgcatcccaaagagtcctcactgatgaagagggagaggacaacctaagg
aagcggagcctccagctgcctttcagttacaccactggggaggctcttctctacaacacc
agctttcccaagactctggtaacaggggactccttagcaggcgacaccatcggctctgca
ggaaataccaccaagaaccaggatgaaaccctggaccctgactcactgctgggctctctg
ttgaaacaggacaagtctgtctactgctgctcccctcagactcaaaacccgctccaactc
ctgctgaaacaggacaagtccatctacgtgtgctgctcccctcacactcagaaccagctc
caactccctctccaactccaggaggaggtggcaggggttccacaggaggaggtggcaggg
gttccacaggaggaggtggcagggcttccacaggaggagtgtgggggcatcttctccagc
agctggcaggagggcagcatcctctctctgtcggagagagtcctcttcaagcaggagccc
ttgggggtgggggatggcggggggatccacggcttctcatcggaggacatagacggggat
ttgtggagcttcatgatgaacctgggcatcagtagggaggacctggagctgttccagcag
gatgagatgttcctcgatgtggatctggacgctggccgagacggcctccttcctgacctg
acagacgagattctctcctacgtacaggagtctctgaggaagaggtcggactggggtcag
actgtgttctcttgcaggggggctaagttaggggatcaggactatagctatcctaccacg
ctattacaccaaccatctatggaacaaccactaacctcacaaccacattctactacagtg
cctcagtggcagtcacagatacagctgcctgtagtccatcccctatcagttcaccactat
cagtctccaccccactacccacagcagccaataccgcagcattgtttacacacacagccc
cacccacagacagcattgcaggcaacacagcagcagcaacagagccatctaaatggacag
gtattgccaacccaacagcagcagcagctgtgtaacagactgaagcacatgcaggtgact
gggacgggttcaataacacaaagacagaaagacatcgccaagcagcagcagcggattcct
ccattgttcaacgtggagcagccaggggggctccaggatcaccatggccacccccagcat
gggaacctctgcctgggggaagcttccctggccctcccctacaggaaccagctgaacact
ttgtctgtcagccgctcctcagtgctctcctcctatgtacccaccacgggtctccagagc
cagggggtggacggagagctcacgccccagaatttggatgagttgctgggcagcctggag
tccagtggtccccggccgacagaggatggtaggggagcgtcccagtggagtgtggtggag
gccctaggtgtgttccagcagcagaggcaccgccctgacggcctggctcagtctcaggcc
accagccagggctgggctcagcatgcctatcccctggctatggggctcagccaggtcaac
agagcagagtggccattcaccacacagttccagaacgggagcctgaaggaggctggtcca
gcccctggccctgtacccaaccctgggtcctccaggggggcagaccatggacatgcagca
gcagggcagccaaagcaccagcctcctccctctgctgagagcaggccctaccctgacctc
cctctgagtggattcatgtga
DBGET
integrated database retrieval system