Salmo trutta (river trout): 115186912
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Entry
115186912 CDS
T08542
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115186912
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115186912
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115186912
Nuclear receptors [BR:
stru03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
115186912
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TPR_IFT122
Motif
Other DBs
NCBI-GeneID:
115186912
NCBI-ProteinID:
XP_029602157
Ensembl:
ENSSTUG00000030412
UniProt:
A0A674BE69
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Position
3:complement(71126384..71151764)
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AA seq
497 aa
AA seq
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MEYEEPESPEHITTEEPIKRGDTVSKKTHLTQIEVIPCKICGDKSSGVHYGVITCEGCKG
FFRRSQLPSVSYSCSRQSNCPIDRASRNRCQSCRLQKCVTQGMSRDAVKFGRMSKRQRES
LHAEVERHRQQQQQHLQAEAQPALLYSSKACCFRTPHLLQAPAPAYSFPGEPELPPCPTD
VLPYLVCSPGESQAPGLAYQGSCVSPGSGHSDERGFDSRQPSPDQTIGMGIRSYDPEDPY
CPYPPSLLHIEELCDSIVRSHRDTSQFRLEELQALRWKLFSREEIHDYQSKSVDEMWQHC
AMRLTEAVQYVVEFAKRIPGFRGLGQNDQITLLKTGSMEVVLVRMSRCFNTENSTVFFDG
KFASTELFKSLGCGDLMVAVFDFAHSMCALRLTEQQMALFSSLVLINTDRPCLEDRGRVH
RMRRNLEVCLSHMLRRDNQESLQHKLYQKVSVLQSLCSLHVEKLHWFSQRYPLTVNSVFP
PLYKELFTSDLPSVDSL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgaggagcccgaatcaccggaacacatcactacagaagaaccaatcaaaaga
ggagacactgtgtccaagaagactcatttgactcagattgaggtgattccctgtaagatc
tgtggtgataaatcatcaggagttcactatggagtcatcacctgcgagggctgcaagggt
tttttccggcgtagccagctgccgtccgtgtcctactcctgttccagacagagtaactgt
cctatagacagagccagccgcaaccgctgccagagctgccgactgcagaagtgtgtgacc
cagggcatgagccgggatgcggtgaagtttggccggatgtcgaaacgtcagcgggagtct
ctgcatgccgaggtggagagacaccgtcagcagcagcagcagcatctccaggcagaggcc
cagcccgccctgctctactccagcaaggcatgctgtttccggacaccccacctgctccag
gccccggctccggcctactccttcccgggagagccagagctgccaccctgcccgacagat
gtgctcccctatctggtgtgctccccaggcgagtcccaggctccaggtctggcctaccag
ggctcctgtgtgtctcctggcagtgggcactcagatgaaagagggttcgactcccgtcag
ccgtctcctgaccagacgatagggatgggaattagatcgtatgacccagaagacccctac
tgcccttaccccccctccctgctacacatagaggagctgtgtgacagtattgtgcggtcc
catagggacaccagtcagttcagactggaggaactgcaggctctgagatggaagttgttc
agcagagaggagattcatgactaccagagcaagtcagtagatgagatgtggcagcactgt
gccatgaggctgactgaagcagtacagtacgtggtggagttcgccaaacgcatcccaggg
ttccgtgggctcggacagaacgaccagatcaccctgctcaagactggttcgatggaggtg
gttctggtcagaatgagtaggtgttttaacacagagaacagcaccgtcttcttcgatggg
aagtttgccagcactgaacttttcaagtctctgggctgtggtgatctgatggtggcggtg
ttcgactttgctcacagtatgtgtgccctgagactgactgagcagcagatggctctcttc
agctcactggtgctcattaacacagatcgcccctgtcttgaggatagaggcagagtacat
agaatgaggagaaacttggaggtatgcctcagccacatgctacgcagagacaaccaggag
agccttcagcacaagctctaccagaaggtgtcagtgttgcagtctctgtgcagtcttcat
gtggagaagctgcactggttcagccagcgctacccgctcaccgtcaactctgtcttccct
cctctatacaaggagctgttcacctccgacctgccttctgtggactccctctga
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