Salmo trutta (river trout): 115187062
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Entry
115187062 CDS
T08542
Name
(RefSeq) nibrin-like isoform X1
KO
K10867
nibrin
Organism
stru
Salmo trutta (river trout)
Pathway
stru03440
Homologous recombination
stru04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115187062
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
115187062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stru03032
]
115187062
03400 DNA repair and recombination proteins [BR:
stru03400
]
115187062
DNA replication proteins [BR:
stru03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
115187062
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
115187062
BRCA1-C complex
115187062
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
BBMV_Gp1_N
Motif
Other DBs
NCBI-GeneID:
115187062
NCBI-ProteinID:
XP_029602165
Ensembl:
ENSSTUG00000030481
UniProt:
A0A674BEP9
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Position
3:71205347..71225972
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AA seq
843 aa
AA seq
DB search
MWTLNPLESGGVTHYLLPGKEYVVGRKNCEVILPNDQSISRAHAHLTATDQALTLKDSSK
YGTFVNEERLSGDTPRSLTAGDRVTFGVFHSKFSVQQVTVVVCSSCVDNEGKVSLSQTLQ
LLGGGLTNTWTQDCTHLVMPTVKVTIKTICALLCCRPIVKQEFFMELTKALQQKQPPPKA
ESFFPEIDEPSLNKDEVDLTERPERKELFTGKTFLFLNAKQQKRLSLAVSCGGGRSQLLE
EGSVPVSLLESPLSCVIGMTTGNSQALLPPSTKKWADSVGRILQRKGLRFITESEIGLAA
IYVSCDKYCNPSNQMADSESMRMKPTIPGTTLSQNAPVDETVMPAASQNITAYAVNTEPS
QGISGTVDVAGVSAVGETPERNQSRTTSHINRPKPSGRELAGTCTVAETMMSSFSASDSA
GGGGSDRKKGELQHPGGGKGDAITRFLATAPRTNGGVQTMSPQKRSSQKQQVSQKDSPQK
QSALTNFFQPVGKKRPREGEESPTVPSEAKLSRREEDKEKTKRTVPQHSETSNPPHTPTG
RSQGQHSSGAHLFPGQTEALSEGFSNPAQQGLQSRKRKEMEEETKGGGASEIEMDELESI
MSEDMDESDEPMSASQGQRLKLTEQSSTNQGQRSQLTDKSSTNKQLLETVELTSANKKQR
IYPVEPIAANHRSGLESEERSSASRRQRAEPVAEVKGEEVSFIESKPINGVTPGHLEEPE
TDAKPVKQEDSGLGGENLPSRLIVVEFKSLTVATPARSKPRPTETHGNVNRKDFKRFCKV
PVPGAQGLPNIIGGSDLLAHNRGKNSELEEWLRDAAEDERQNKKEETLGDDLFRYNPKPT
KKR
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtggacactgaaccctttagaatccggaggtgtcacccactacctcctgccaggtaag
gagtatgtggtggggcgtaagaactgtgaggtcatcctgcccaatgaccagtccatcagc
cgggctcatgctcacctcactgctacagatcaggccctgaccctgaaggacagttctaag
tatggcacgtttgttaacgaggagcgtctgtcaggagacacccctcgcagcctgacggca
ggggacagagtgacatttggggtctttcacagcaaattcagtgtgcaacaggtaactgtg
gtggtgtgctcgtcctgtgttgataatgaagggaaggtctctctgtctcagaccctgcag
cttctgggtggcgggctgaccaacacctggacacaggactgcactcacctggtcatgccc
actgttaaagtcaccatcaagactatctgtgcgttgctgtgctgtcggcccatagtcaag
caggagtttttcatggagctcaccaaagccctgcaacagaaacaaccacctccaaaagct
gagagtttcttcccagagatagatgagcccagtctgaataaggatgaggtggacctgaca
gagaggccagaacgtaaagaacttttcactggcaagaccttcctcttcctcaatgccaaa
cagcaaaagcgtctgagtttggcagtgagttgtggaggtgggaggagccagctcttggag
gaggggtctgtccctgtgtcactcctggaatcaccattgagctgtgtgatcggcatgaca
acggggaactcccaagcactactgcccccctccactaagaagtgggcagactctgtgggg
aggattctacagaggaaaggtcttcgattcatcacagagtctgagatcggattggctgcc
atctatgtcagctgtgacaagtactgcaatccctccaatcagatggctgactcagaatcc
atgagaatgaaacccaccatccctggcaccacgctatcccagaatgcaccagtggacgag
acggtaatgccagcggcgtctcagaacatcacagcctatgctgtaaacacagagccgtca
cagggcatcagtggtacggttgacgtggctggggtgagcgcagttggagagacccctgag
aggaaccagagccggaccacctctcatattaaccgacccaaaccctcaggccgagagctg
gccgggacctgcacagtggcagagactatgatgtcatcattcagcgcctcagacagcgct
ggtggtggcggctcggacagaaaaaagggagagctacaacatccaggtggagggaaaggt
gatgctatcaccagattcctggccacagcccctcggaccaacggaggagtgcagacgatg
tccccacagaagcgctcctcccagaaacaacaggtctcgcagaaagattccccccagaaa
cagtctgccctcactaatttcttccagcctgtcggcaagaaaagacctcgggaaggcgag
gagtcccctactgtcccatcagaggccaagctatccaggagggaagaagacaaggagaag
acgaagaggacagtaccacagcactcagagacctccaaccccccacacacccccacaggc
aggtcccagggccaacacagctcaggtgcacatctgtttccaggtcagactgaggctctg
tcagaggggttctccaaccctgcccagcaggggctccaatccaggaagaggaaggagatg
gaggaggagactaaagggggtggggcttcagagatagagatggacgaactggagtccatc
atgtctgaggacatggacgaatcggatgagcccatgtcagccagtcaaggccagcggttg
aagctgacggaacagagttcaaccaatcaaggccagaggtctcaactgacagacaagagc
tcaaccaataaacagctcctagagacagtggaacttacctctgccaataagaaacagcgg
atttatccagtggaaccaattgcagccaatcataggtcaggcttggagtcagaagagcga
tcgtcagccagcagacgacagcgagcggagcctgtagctgaggtcaaaggcgaagaggtg
tcttttattgagtcaaaaccaattaatggtgtgacccctggtcatctggaagagccagag
accgatgccaaacctgtcaaacaggaagactcaggtttagggggtgagaatctccccagc
agacttatagtggtggagttcaaatccctcaccgtggcaacaccggcaagatctaaacca
cgccccacggagacgcacggcaatgtcaacaggaaagactttaaacgcttctgcaaggtc
ccagttcccggtgcccagggtttgcccaacatcatcggagggtcagacctgttggcccac
aaccgaggcaagaactctgagctggaggagtggctgagagacgcagcagaggatgagcgt
cagaacaagaaagaggagactttgggagatgaccttttcaggtacaaccccaaacccacc
aagaaaagatga
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