KEGG   Salmo trutta (river trout): 115187062
Entry
115187062         CDS       T08542                                 
Name
(RefSeq) nibrin-like isoform X1
  KO
K10867  nibrin
Organism
stru  Salmo trutta (river trout)
Pathway
stru03440  Homologous recombination
stru04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    115187062
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    115187062
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stru03032]
    115187062
   03400 DNA repair and recombination proteins [BR:stru03400]
    115187062
DNA replication proteins [BR:stru03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    115187062
DNA repair and recombination proteins [BR:stru03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     115187062
    BRCA1-C complex
     115187062
SSDB
Motif
Pfam: Nbs1_C NIBRIN_BRCT_II FHA Yop-YscD_cpl BRCT RTT107_BRCT_5 PTCB-BRCT BBMV_Gp1_N
Other DBs
NCBI-GeneID: 115187062
NCBI-ProteinID: XP_029602165
Ensembl: ENSSTUG00000030481
UniProt: A0A674BEP9
LinkDB
Position
3:71205347..71225972
AA seq 843 aa
MWTLNPLESGGVTHYLLPGKEYVVGRKNCEVILPNDQSISRAHAHLTATDQALTLKDSSK
YGTFVNEERLSGDTPRSLTAGDRVTFGVFHSKFSVQQVTVVVCSSCVDNEGKVSLSQTLQ
LLGGGLTNTWTQDCTHLVMPTVKVTIKTICALLCCRPIVKQEFFMELTKALQQKQPPPKA
ESFFPEIDEPSLNKDEVDLTERPERKELFTGKTFLFLNAKQQKRLSLAVSCGGGRSQLLE
EGSVPVSLLESPLSCVIGMTTGNSQALLPPSTKKWADSVGRILQRKGLRFITESEIGLAA
IYVSCDKYCNPSNQMADSESMRMKPTIPGTTLSQNAPVDETVMPAASQNITAYAVNTEPS
QGISGTVDVAGVSAVGETPERNQSRTTSHINRPKPSGRELAGTCTVAETMMSSFSASDSA
GGGGSDRKKGELQHPGGGKGDAITRFLATAPRTNGGVQTMSPQKRSSQKQQVSQKDSPQK
QSALTNFFQPVGKKRPREGEESPTVPSEAKLSRREEDKEKTKRTVPQHSETSNPPHTPTG
RSQGQHSSGAHLFPGQTEALSEGFSNPAQQGLQSRKRKEMEEETKGGGASEIEMDELESI
MSEDMDESDEPMSASQGQRLKLTEQSSTNQGQRSQLTDKSSTNKQLLETVELTSANKKQR
IYPVEPIAANHRSGLESEERSSASRRQRAEPVAEVKGEEVSFIESKPINGVTPGHLEEPE
TDAKPVKQEDSGLGGENLPSRLIVVEFKSLTVATPARSKPRPTETHGNVNRKDFKRFCKV
PVPGAQGLPNIIGGSDLLAHNRGKNSELEEWLRDAAEDERQNKKEETLGDDLFRYNPKPT
KKR
NT seq 2532 nt   +upstreamnt  +downstreamnt
atgtggacactgaaccctttagaatccggaggtgtcacccactacctcctgccaggtaag
gagtatgtggtggggcgtaagaactgtgaggtcatcctgcccaatgaccagtccatcagc
cgggctcatgctcacctcactgctacagatcaggccctgaccctgaaggacagttctaag
tatggcacgtttgttaacgaggagcgtctgtcaggagacacccctcgcagcctgacggca
ggggacagagtgacatttggggtctttcacagcaaattcagtgtgcaacaggtaactgtg
gtggtgtgctcgtcctgtgttgataatgaagggaaggtctctctgtctcagaccctgcag
cttctgggtggcgggctgaccaacacctggacacaggactgcactcacctggtcatgccc
actgttaaagtcaccatcaagactatctgtgcgttgctgtgctgtcggcccatagtcaag
caggagtttttcatggagctcaccaaagccctgcaacagaaacaaccacctccaaaagct
gagagtttcttcccagagatagatgagcccagtctgaataaggatgaggtggacctgaca
gagaggccagaacgtaaagaacttttcactggcaagaccttcctcttcctcaatgccaaa
cagcaaaagcgtctgagtttggcagtgagttgtggaggtgggaggagccagctcttggag
gaggggtctgtccctgtgtcactcctggaatcaccattgagctgtgtgatcggcatgaca
acggggaactcccaagcactactgcccccctccactaagaagtgggcagactctgtgggg
aggattctacagaggaaaggtcttcgattcatcacagagtctgagatcggattggctgcc
atctatgtcagctgtgacaagtactgcaatccctccaatcagatggctgactcagaatcc
atgagaatgaaacccaccatccctggcaccacgctatcccagaatgcaccagtggacgag
acggtaatgccagcggcgtctcagaacatcacagcctatgctgtaaacacagagccgtca
cagggcatcagtggtacggttgacgtggctggggtgagcgcagttggagagacccctgag
aggaaccagagccggaccacctctcatattaaccgacccaaaccctcaggccgagagctg
gccgggacctgcacagtggcagagactatgatgtcatcattcagcgcctcagacagcgct
ggtggtggcggctcggacagaaaaaagggagagctacaacatccaggtggagggaaaggt
gatgctatcaccagattcctggccacagcccctcggaccaacggaggagtgcagacgatg
tccccacagaagcgctcctcccagaaacaacaggtctcgcagaaagattccccccagaaa
cagtctgccctcactaatttcttccagcctgtcggcaagaaaagacctcgggaaggcgag
gagtcccctactgtcccatcagaggccaagctatccaggagggaagaagacaaggagaag
acgaagaggacagtaccacagcactcagagacctccaaccccccacacacccccacaggc
aggtcccagggccaacacagctcaggtgcacatctgtttccaggtcagactgaggctctg
tcagaggggttctccaaccctgcccagcaggggctccaatccaggaagaggaaggagatg
gaggaggagactaaagggggtggggcttcagagatagagatggacgaactggagtccatc
atgtctgaggacatggacgaatcggatgagcccatgtcagccagtcaaggccagcggttg
aagctgacggaacagagttcaaccaatcaaggccagaggtctcaactgacagacaagagc
tcaaccaataaacagctcctagagacagtggaacttacctctgccaataagaaacagcgg
atttatccagtggaaccaattgcagccaatcataggtcaggcttggagtcagaagagcga
tcgtcagccagcagacgacagcgagcggagcctgtagctgaggtcaaaggcgaagaggtg
tcttttattgagtcaaaaccaattaatggtgtgacccctggtcatctggaagagccagag
accgatgccaaacctgtcaaacaggaagactcaggtttagggggtgagaatctccccagc
agacttatagtggtggagttcaaatccctcaccgtggcaacaccggcaagatctaaacca
cgccccacggagacgcacggcaatgtcaacaggaaagactttaaacgcttctgcaaggtc
ccagttcccggtgcccagggtttgcccaacatcatcggagggtcagacctgttggcccac
aaccgaggcaagaactctgagctggaggagtggctgagagacgcagcagaggatgagcgt
cagaacaagaaagaggagactttgggagatgaccttttcaggtacaaccccaaacccacc
aagaaaagatga

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