Salmo trutta (river trout): 115187578
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Entry
115187578 CDS
T08542
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115187578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115187578
03036 Chromosome and associated proteins [BR:
stru03036
]
115187578
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
115187578
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
115187578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
MSL3_chromo-like
Motif
Other DBs
NCBI-GeneID:
115187578
NCBI-ProteinID:
XP_029602392
Ensembl:
ENSSTUG00000047441
LinkDB
All DBs
Position
3:complement(71757025..71764073)
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AA seq
692 aa
AA seq
DB search
MASCRSCGGSGPLESFLQGKYCSSICVQPSSGRSSPREQREREGWEGGLGKRVRKKRKIY
MDSGDEEEDNQEEEEDKAKAVKGRRAAKLAKLVTAPPNKKRPWSWPSYMEEEKAIAAPLK
LFKEHQSFPQSRNAFKVGMKLEGLDPCHPSLFCVLSVAEVQGYRIRLHFDGYPECYDFWV
NADTWDVKPAGWCEKMGHKLLLPKGCKDGEFNWNMYVKNCRGQLAPKHLFKSLNTSVTPS
GFRAGMKLEAVDKKNPYLICVASIAAAVDNRLLIHFDNWDDTYDYWCDASSPYIHPVGYC
EEAELTLTTPAEYKHPRSFSWDKYMEETGTQAAPARAFKLRPCHGFQAGMKLEAVDKRNP
MLIRVATIAEVEDHRLRIHFDGWSEEYDYWVDADCPDLHPVGWCQKTSHPLQHPSNGSTD
MLVLPGQGCPTPGCNGVGHIRGPRYGTHYTGVSCPYSEMNLNREGQVPDRLSGERPMTLS
GPHHRGRRPDPPSHTQTNSPTTPEQPEPADDSPQTSVTRGPTVDEGERSRCSSQSEPPGG
STEPINEGAKAKRSAPVPKYLKLHVVKQESGDGKDSLSLQQALHESVFSPGGSSSPPHRV
ALCWDKHCQLLPEVLGLTAKRVATWTADEVASFVKGLPGCKEHAATFRTEQMDGEAFLLL
TQADIVKILSIKLGPALKIYNAILMLKNADEE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggctagctgtaggtcgtgtgggggctccggtccactggagagtttcctccagggcaaa
tactgcagctccatttgtgtccagccctccagtggcaggtcatctcccagagagcagagg
gagagagaggggtgggaggggggactggggaaacgagtgaggaagaagaggaagatctac
atggactctggtgatgaagaggaagataaccaggaggaagaagaggacaaggccaaggct
gtcaaagggaggagagctgcaaagctggccaagctagtgacagccccacccaataagaag
cgaccctggagctggccctcctacatggaggaggagaaggctatagctgccccccttaaa
ctgttcaaggagcaccagtcattccctcagagcaggaatgccttcaaagtggggatgaag
ttagaaggactggacccctgtcacccctctctgttctgtgtgctcagtgttgctgaggtc
cagggttataggataaggcttcatttcgacgggtatccagagtgctatgacttctgggta
aatgctgacacctgggatgtgaagccggcgggctggtgtgagaagatgggacacaagctg
ctactgcctaaaggttgtaaggatggggagttcaactggaacatgtatgtgaagaactgc
agaggtcagctggcccccaaacacctcttcaagagcctcaacacgtcggtgactccgtca
gggttccgtgcgggtatgaagctggaggcggtggataagaagaacccatatctgatctgt
gtagcgtccatcgcggctgctgttgacaacagactcctcatacactttgacaactgggac
gacacctatgactactggtgtgatgccagcagtccctacatccaccctgtaggttactgt
gaggaggctgagctgaccctcaccacccctgctgagtataagcacccgaggagtttttcc
tgggataaatacatggaggagactgggacacaggcagcccctgcacgtgccttcaaactg
cgtccgtgccatgggttccaggctggaatgaagctggaagccgtcgataagaggaacccc
atgctcatccgcgtagcaaccatcgccgaggtggaggaccaccgactgaggatccatttt
gatggctggagtgaggagtatgactactgggtggatgctgactgcccagacctgcaccct
gtgggctggtgtcagaagactagtcatcccctacaacacccctccaatggctccactgat
atgctggtcctcccagggcagggctgtcctaccccaggatgcaatggggttggtcacatc
cgaggaccccgctacggaacccactacacgggggtgagctgtccgtactcggagatgaac
ctgaacagggagggccaggtaccagaccgtctgagtggagaacgacctatgaccctgagt
gggcctcatcaccgtgggcgacgcccagaccctccttcacacacccagacaaacagcccc
accacaccagagcagcccgagcctgcagacgactcccctcagaccagtgtaactaggggg
ccgacggttgacgagggcgaacgatccaggtgcagcagtcagagtgagccaccagggggc
tccactgagcccatcaacgaaggagccaaggccaagaggtctgccccagtcccaaagtat
ctgaagctgcacgtcgtcaagcaggagagtggcgatgggaaagactccctgtctctccag
caggcgctccatgagtcagtgttctccccgggtggctcctcctctccccctcacagggtg
gctctgtgctgggacaaacactgccagctgctccctgaggtcctgggcctcacagctaag
agagttgcaacctggactgccgacgaggtggccagttttgtcaaagggctcccaggctgc
aaagagcatgctgccaccttcaggacagagcaaatggatggagaggccttcctgcttctc
acccaagcagacatagtcaagatcctgtcaatcaaacttggccccgccctcaagatatac
aacgccatactcatgctgaagaacgctgatgaggagtga
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