Salmo trutta (river trout): 115187580
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Entry
115187580 CDS
T08542
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-3-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115187580
04082 Neuroactive ligand signaling
115187580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115187580
Ion channels [BR:
stru04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
115187580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Pyr4-TMTC
DUF1286
Motif
Other DBs
NCBI-GeneID:
115187580
NCBI-ProteinID:
XP_029602393
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MDPSGIVTVVLLLVVLTAQGCLSSKGEDRLFRNLFRRYNQFIRPVENVSDPVTVEFEVSI
SQLVKVDEVNQIMETNLWLRHVWNDYKLKWVPIEYDGLEFIRVPSNKIWRPDIVLYNNAV
GDFLVEDKTKALLKFDGTITWIPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKID
LVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINL
IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL
LFTMIFVTLSIVITVFVLNVHYRTPMTHTMPAWVRSVFLGLLPKVLLMRRPVDQGCPSLG
SGRGDGTGGGSIGDGGVGGGASGTGKKRKNSIGGGIGGGWQAGAMNCVEYGEVQNKPNFP
CNSTVPPVVPPPAPSDPDLSKLPRALSSPPNVNAVVAFSVVSPEIKQAIESVKYIAENMR
TRNKAKEHHLSDGSRNLTDCFPSLFVLNYNN
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggatccttccggaatagtcaccgtggtgcttctgctggtggtcctgacagcgcaaggc
tgtttgtcatctaagggggaagacaggctgttcaggaatttattcaggcgatacaaccag
ttcatcagaccagtggagaatgtctctgaccctgtcaccgtggagtttgaggtctccata
tcccaactggtcaaagtggatgaagtcaatcagattatggagaccaatttatggctgaga
catgtctggaatgactacaaactgaaatgggttcccatcgagtatgacggacttgagttc
attcgcgtgccctccaataagatatggaggccggacatcgtcctctacaacaatgctgtg
ggagatttcctggttgaggacaagaccaaagctctgctgaagtttgatggcaccatcacc
tggatcccccccgccatctttaaatcctcctgccccatggacatcacttacttccccttc
gactaccagaactgctccatgaagtttggctcctggacctacgacaaggccaagattgac
ctagtgctcatagggtcaaaggtgaacctcaaggacttctgggagagtggcgagtgggag
attatcgacgcgccgggctacaaacacgacatcaagtacaactgctgtgaggagatctac
ccagacatcacctactctttctacatcagacgcttgcctctcttctacaccatcaacctc
atcatcccttgtctcctcatctccttcctcaccgtcctcgtcttctacctcccctctgac
tgtggagagaaggtgaccctctgtatctctgtcctcctgtccctcactgtgttcctcctg
gtcatcactgagaccatcccgtctacgtctctggtcatccctctcatcggggagtacctc
ctcttcaccatgatcttcgtcaccctctccatcgtcatcaccgtgtttgtgctgaacgtc
cactaccgtacgcctatgacccacaccatgccggcgtgggtccggtctgtgttcctgggg
ttgctgcccaaggtgctgctcatgaggaggccagtagaccagggctgcccctccttgggg
agtgggagaggagatggaacaggaggtgggagtattggagatgggggtgtaggaggagga
gcgagtggaacggggaagaagaggaagaacagcattgggggaggaatagggggcgggtgg
caggcgggggcgatgaactgtgtggagtacggcgaagtgcagaacaagccgaatttcccc
tgtaattccaccgtacccccggtggtgccccctcctgccccctctgatccggacctatcc
aaactgccccgagcgctcagcagcccgcccaacgtcaacgcagtggtggccttctccgtg
gtgtcaccagagatcaaacaggccatcgagagtgtcaagtacatcgctgaaaacatgaga
acacgcaacaaggccaaagagcaccacctcagcgacggcagtcgcaatctcaccgactgt
ttcccctccctctttgttctgaactacaacaattga
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