Salmo trutta (river trout): 115187756
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Entry
115187756 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115187756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115187756
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115187756
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115187756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
115187756
NCBI-ProteinID:
XP_029602640
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MADVPVPPSSLRTEGILLREIHVNLLECKVCFEKYNPRQKERRPQNLSCGHVLCLECVRV
LSHPVLKKLECPFCRQLCDVDSTSHCQALTDLQDLLLSRSPRSPVPHRVRGGSGWVGGLG
SGALRLRSAFGGWGSLINPTGVAVFGSSGTMVVVHDGERRVVVFGPQGRRLHGFGRRGRG
NGEVCHPVDVAVTPSGYVVVTDAGDSAVKVFTTRGSFVLAVWDSFQTPWGVDVDSCGHIL
VTDIQAGTLSQVVVDFARGVTLMNRAVITDLQRPKAVACCRVTGNIALVETLGLTTTQPP
NGPRPTRLTIFNKDFNMLSQIDSFTLSLGASVWPCMSAVAFDRAGDVMVIDSQRGLIWSL
GKLQNGPVLTPLVSEDLVRPVGLVTTAQNTLIVLDSGDHAVKMYSVHSDSILVRK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgttcctgttcctccttcctcactgagaacagaggggatcctcctgagagag
atccacgtcaacctgctggagtgtaaagtctgcttcgagaagtataacccacggcagaag
gaacgccggcctcagaacctgtcctgcggccatgtactctgtctggaatgtgtccgggtg
ctctcccaccccgtcctcaagaagcttgagtgccctttctgccggcagctgtgtgacgtt
gacagcacctcccactgccaggcgctgacagacctccaggatcttctgctctcccgctcc
cccaggtcacctgtccctcatcgggtcagaggaggcagcggctgggtcggaggtctgggc
tctggagctctgcgacttcgctcagccttcgggggctgggggtccctgatcaaccccacg
ggggtggccgtgttcgggtcctctgggaccatggtggtggtgcacgatggagaaaggagg
gtggtggtattcgggcctcagggcaggcggctgcacgggttcgggcggaggggtcgcggc
aacggggaggtgtgtcacccggtggatgtggcggtgactcccagcgggtatgtggttgtg
acggatgccggtgacagtgcagtgaaagtgttcaccaccagggggagttttgttctggcg
gtgtgggactccttccagacgccctggggggtggacgtggacagctgtggacatatcctt
gtcactgacatccaggccggcacgctctcccaggttgtggtggactttgcccgtggcgtg
actctgatgaaccgagcggtcataaccgacctccagcggcccaaggcagtggcctgctgt
cgggtgaccgggaacatcgccctggtggagacactggggctcacaaccacacaacctcca
aatggcccccggcctaccagactgacaatattcaacaaagactttaacatgctctctcag
atagacagctttactctgagcctgggggcctcagtgtggccctgcatgtctgccgtggcc
tttgacagggccggggatgtgatggtgatagactcccagcgtgggttgatttggagtttg
ggaaagctccagaacggcccggtcctaacccccctggtcagtgaagacttggttcgcccg
gtggggctggtcaccacagcacagaacacgctgattgttttagacagtggagaccatgca
gtgaagatgtattcagttcactcggattctattctagtccgaaaatga
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