Salmo trutta (river trout): 115188397
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Entry
115188397 CDS
T08542
Name
(RefSeq) contactin-1-like
KO
K06759
contactin 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115188397
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115188397
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
stru00537
]
115188397
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
Contactins
115188397
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
stru00537
]
Others
115188397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
115188397
NCBI-ProteinID:
XP_029603067
Ensembl:
ENSSTUG00000051167
UniProt:
A0A674F791
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MAVTALVLLVLSSSLSHTVAVLFGEPRIFGDDATGYGPIFEEEPLDIVYTKESPDRHISM
NCRARANPAPTYRWRRDNWEIKLMELPNEHYSLVGGNLIINNPEEKKHAGIYVCVAKNMY
GTVISKEAKVKFGYLEEFPDEERDPVTVKEGQGAVLLCVPPKRWPAEVTFRWIYNEFPVF
LHPDKRRFVSQSTGNLYISKVEASDAGNYSCYVFNPQIGKGVYSKFIPLISTEETPEKRY
KADLVVKFPDTTAMLNYNVTLECFALGNPAPHIVWRKIGATDLPASAQVSMSGALLHLYN
VQYEDSAGYECEAINQKWQDWHQAWLYVEAAPEWAVTINNTQKDIGSEHTMSCVANGKPV
PYIRWLKDGYSYGKGELKFSSLTFEDSGMYQCIAENYWGIIYASAELRVIACAPTFELNP
VKKYLLGANNGRVVIECKPRAAPRPRFTWTKGKEVLFNNSRISIMFDGSLEILNATRNDE
GVYTCLAENDRGKANSTGTLTITEATQITVAPENTQVMVGEEVHLQCQASFDPSLDITFI
WSLDFRVINFYLEWKHYERIMDREDSGELKIMNVQLRHEGRYTCTAQTVVDNVTASADLK
VKGLPAPPGGVRVEEIRDTSVKLVWNQGADHGSPILGYTIQTRDFYALTEVDWKDASTSP
TPLSGRSVMADVVDLYPWMEYEFRVYATNGFGDGEASIPSMKIKTWDAVPVVAPTNVGGY
GGKDGELVITWTPVQPQYFYGKKFGYVVAFKPHDDVDWWYETISDPETRRYVHRDASFRV
KSNDFQVREFQVKVKTFNSKGDGPYSLSTTVYYPRDVPSESPTDVYSRPVSSHEALVWWI
PVMDTGTGLQQYIDGYQVKYWRKYDDTEPGANRIFVPASMNQTRLENMLPDSHYLIEVRA
YNGAGVGPPSEHCEMFTKRAPPSVAPQMWRYISYSGKWLYVWWHHIPYDWFGNESFPLYY
KVMFRKTGYITGPIYMTGWHFIDFPMPQVGDYELEVRGRYEGGDGPIRKIRLQGKASFLR
PTLSLATMLLLALCIVGLGI
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcacagccctggtcctgctcgttctctcctcctcactgtcacacactgtggca
gtcttgtttggtgagcccaggatctttggagatgatgctactggctacggtccaatattt
gaagaggagcctctggacatcgtctacacaaaggagtcacctgacagacatatctccatg
aactgtagagcacgggccaaccctgcacccacatacagatggaggcgtgataactgggag
atcaagctgatggagctgcctaatgaacactacagtctggtgggagggaacctcatcata
aacaaccctgaagagaagaaacatgcagggatctacgtctgtgttgccaagaacatgtac
ggcaccgtcatcagcaaggaggccaaggtcaagtttggatacctggaggagttcccagat
gaagagagggaccctgtgaccgtgaaggagggccagggggccgtgctgctctgtgttcct
cccaagcgatggccagctgaggtgacgttccgttggatatacaacgagtttccggtcttc
ctccacccggataagcgtcgcttcgtctctcagagcaccgggaatctgtacatctctaag
gtggaggcgtcagacgcaggaaactactcctgctatgtgttcaacccacagattggcaag
ggagtctactccaagtttatccctcttatatctacagaagagaccccagagaagaggtac
aaggccgacctcgtagtgaagttccctgacaccacagctatgctcaactacaacgtcaca
ctggagtgcttcgctctgggaaatccggcccctcatatcgtctggaggaagataggtgct
accgacctgcctgctagcgctcaggtcagcatgtctggagcgctgctccacctctacaac
gtccagtatgaagactcagcagggtacgagtgtgaggccatcaaccagaaatggcaggac
tggcatcaggcatggctctatgtagaggctgctcctgagtgggctgtgaccatcaacaac
acccagaaggacatagggtcagaacacaccatgtcctgtgtagctaacgggaagcctgtc
ccatacatccgatggctcaaggatggatactcgtatggtaaaggtgagctgaagttctcc
agtctgacgtttgaagactctgggatgtaccagtgtatcgctgagaactactggggtatc
atctacgccagcgctgagctacgtgtcattgcttgtgccccgacgtttgagttgaaccca
gtgaagaagtatcttctaggagctaacaacggccgtgtggtcatagagtgtaaacccaga
gctgcccccagacccaggttcacctggaccaagggaaaagaagtgctcttcaacaactca
cgtatctccataatgtttgatgggagtctggagatcctgaacgccaccaggaatgatgag
ggggtgtacacctgcttagctgagaatgacagagggaaggccaacagcacggggactctc
accatcacagaggcgacacagatcacagtagccccagagaacactcaggtgatggtagga
gaggaggtgcatctgcagtgccaggcctcctttgaccccagtctggacatcaccttcatc
tggtctctggatttcagggtcatcaacttctacctagagtggaagcactatgaacgcatc
atggatcgtgaggacagtggagagctgaagataatgaatgtccagttaagacacgaggga
cgctacacctgtacagcccagactgtcgtggacaacgtcaccgcgtcagcggacctcaag
gtcaaaggtcttcctgctcctcccggtggggtgagggttgaggagatcagggacacctcg
gtgaagttggtgtggaaccaaggggccgaccatggcagccccatccttgggtacaccatc
cagaccagggacttctacgcactgactgaagtggactggaaggacgcatctacctcccct
acgcccctgagtggcaggtcagtgatggctgatgttgtggacctgtacccctggatggag
tatgagttcagggtctatgctactaatgggtttggagacggggaggccagcatcccttca
atgaagatcaaaacctgggacgcagtgcctgtggtggccccgaccaacgttggaggctac
gggggtaaagatggagagttggtcatcacatggacacccgtacagccgcagtacttctac
ggtaagaagtttggctacgttgtggccttcaagcctcatgatgatgttgactggtggtat
gagaccatatcagacccagagacacgacgctacgtccatcgagacgcctctttcagggtc
aagtcgaacgacttccaggtcagggagttccaggtgaaggtgaagacgtttaactccaaa
ggagatggaccctacagcctgtcgaccactgtctactacccacgagatgtcccctctgag
tctcctacagatgtatactccaggcctgtctcgtcccatgaagctctggtctggtggata
ccagtcatggacactggtaccggccttcagcagtacatagatggataccaggtgaagtac
tggaggaagtatgacgatacagagccgggagccaatcgtatctttgtgcccgcctccatg
aaccagaccaggctggagaacatgctgccagactcccactacctcatcgaggtcagagcc
tacaacggagccggtgtcggccctcccagcgaacactgcgagatgttcaccaagagagca
cctccaagtgtggctccccaaatgtggcgttacatcagctactctggcaagtggctgtac
gtgtggtggcaccacatcccctacgactggtttggcaatgagtccttcccactatattat
aaggtgatgttcaggaagacgggctacatcacagggccgatctacatgacgggctggcac
ttcattgacttccccatgccccaggtaggggactacgagctggaggtcagaggtcgctat
gagggtggagacggccccatcaggaagatcaggcttcagggtaaggcgtctttcctgaga
cccactctcagtctggccaccatgctactgctggccctgtgcatcgtgggattggggata
tag
DBGET
integrated database retrieval system