Salmo trutta (river trout): 115188410
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Entry
115188410 CDS
T08542
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115188410
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115188410
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
115188410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
GRASP55_65
Motif
Other DBs
NCBI-GeneID:
115188410
NCBI-ProteinID:
XP_029603109
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MGPALELEKNKVIMKSVQVTHLCWTLLLLSSPPPLLLSIGNCLCSVLSLQQVELCRLNSQ
EKLGLTLCYRTDDEEDTAIYVSHVGPNSIAARDGRIREGDRILQINGCNVQDRQEAFTLL
SNEESRSIVLLVTRPEEAWLDEEHNDLLEELKMEILEERRNEEAQKTGGGEEQAKQLEED
DVMTDTATCSSNTQDKDSGMGRNEESSEQEVLLARVHRRPAQGLRDRWRAKHGQGLGRRV
VVPSDTQGPRGLIQAQEGEGGVGLGLECDSHFQQLLELKCQIRNSGECGVYYSRRSTIEC
SLTEQSGVGVSGSGGMEQELRMLNEELRSIELECQNIMQAHQLRKNQRDPPCTPMCSPGQ
SPKHGREQHAKLADINEHPGERQWDSDKLRGDKDSSSAYNTAESARSTPLGMERSPDHSL
QRRISLTNQKNLRSTMAASSQSISKPIPDRELLSETSTGTPTHSRQDPNPSPGTTVISSS
PDQSNPSPSESDPALPADDERCDCTRSHRGPRRVPPCTSPYHTAPQQGQGASPAHARHLQ
SYMQQLLQQSSSLETYSQSQLSLLSVCRERSGRPGEPRLEWKVKVRADGTKYVARRPARD
RILRERALRIREERSGGMTTDDDAMSEMKMGRYWSKEERKQQLARAREQRRRREYMQRSR
LECLREGPGSGAEGRKEVNILELSHKKMMKKRNKKILDNWMTIQELMSHGARAPEDQGTK
PVHNAFLSVTTV
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgggcccagctcttgaacttgaaaagaacaaggtcattatgaagtctgtgcaggtaaca
catctctgttggactctcctccttctctcctctcctcctcctctcctcctttccattggg
aattgtctctgttctgttctgtctctacagcaggtagagctctgtcggctcaacagtcag
gagaagttgggtctgacgctgtgctatcggactgacgatgaagaggatacagctatctac
gtcagccacgttggacccaacagcatcgctgccagggacggccgcataagggaaggagat
cgaatattacagatcaatggctgtaacgtacaggaccggcaggaagctttcactctcctg
tccaatgaggagtccaggagcatcgttctcctggtgaccagaccagaggaggcatggctg
gatgaggagcacaatgacctcctggaggagctgaagatggagatcctagaggagaggagg
aacgaggaggcgcagaagacaggaggaggagaggagcaggccaagcagctggaggaggat
gacgtcatgacagacacggccacgtgttcctccaatactcaggacaaagacagcggcatg
gggcgcaacgaggagagctccgaacaggaagtcctcctagcccgtgtccaccggaggcct
gcccagggcttgagagacagatggagggccaaacatggccaggggctgggcaggagggtg
gtggtgccctcggacacccagggacccaggggtctgatccaagcccaagagggtgagggc
ggagtggggttaggactggagtgtgacagccacttccagcagctcctggagctcaagtgc
cagatccgcaacagcggggaatgtggtgtgtactatagcaggagaagcaccatcgagtgc
agcctgacggagcagagcggggtgggggtcagtggtagtggagggatggaacaggagctg
aggatgttgaacgaggagctgaggagtattgagctggagtgtcagaacatcatgcaggcc
caccagctccgcaagaaccagagggatcccccctgcacccctatgtgctccccaggacaa
agccccaaacatgggcgtgagcagcatgccaagctggccgatatcaacgagcatccaggg
gagaggcagtgggacagcgacaagctaaggggcgacaaggacagctccagtgcctataac
acggctgagagtgccaggtccactcctctaggcatggagagatccccggaccactctcta
cagagacgcatcagcctcaccaaccagaagaacctccggagcaccatggcagcatccagc
cagtccatctccaaacccatcccagacagagagctcctgagtgagacctcgaccgggacc
cccacgcacagccgacaggatcccaaccccagccctggaaccacggtcatctccagcagc
cccgaccaatccaacccttccccctctgagtcagacccggccctgcctgcagacgacgag
cgctgcgactgcaccaggagccaccgggggccacgcagggtccctccctgcacgtcccct
taccacacagccccccagcaggggcagggtgcctctccagcccacgccagacaccttcag
agctacatgcagcagctcctccagcagtcctccagtctggagacttactcccagtcccag
ctcagcctcctcagcgtctgccgggaacgctccggccgcccgggggaaccacgcctcgag
tggaaggtcaaagttcgagccgacgggacgaagtatgtagcccggcgaccagcgagggac
cggattctacgagaacgggcgctgaggatcagggaggagcgtagtggagggatgaccacg
gacgacgacgctatgtcagagatgaagatggggcggtactggagtaaagaggagaggaag
cagcagctggccagagccagggagcagaggaggaggagggagtacatgcagaggagccgg
ctagagtgtcttagagagggccctgggagcggggccgagggccgtaaagaggtcaacatc
ctggaactcagccacaagaagatgatgaagaaacgcaacaagaagatcctggataactgg
atgaccatccaggaactaatgagtcacggggccagagcacctgaggaccaggggactaaa
ccagtacacaatgccttcctgtctgttactacagtatag
DBGET
integrated database retrieval system
