Salmo trutta (river trout): 115188731
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Entry
115188731 CDS
T08542
Name
(RefSeq) zinc finger CCCH domain-containing protein 13-like isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115188731
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
115188731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
115188731
NCBI-ProteinID:
XP_029603352
LinkDB
All DBs
Position
Unknown
AA seq
2180 aa
AA seq
DB search
MSKIRRRVTVENSKTISDSSSSQTSTTPSRRPSVFERLGPSTGSNAVEVCTSTPASNPLT
DTSHACPEKTNCRNWLKTGNCSYGNTCRYTHGTQPRGKGFSGSFSRSAERPTGDLRERMK
NKRQDVESDATKRDPEEPTSPTARQRDSSRGRHREKEDIKITKERTPASEEETTEWEANR
EDSDNGDYDYELSLEMKRQKIQRELMKLEQENMEKREDIVIKKEVPEPTTKTRTTIISKT
SPERSSSKGSPSSRKSSGSPKHTKGPKASGSRKKEKKTSVSSSASATARSSKGGHGKKKG
PRTPSPPPPVLPLVNPVVAAGGKKHKGKHKNKEKCEEKPPKEGKERGRDAEKHKEKKEKR
RDRSDSSHKTKRSVMSEERSGSVSSPSRDREMSPSARKNKSTSPKVASQKTLAPASPPHR
SPPPRHKRTPTPPRHHSPSSHSGSSAQRHSPSPRRRRSASPAYNREPPAASSPPGQRCSS
RSPAASRDTSSPQRRTSPGGRNHSRGRERGRSERGRSPPAQEHRHERRDESRGKREKDCS
RDDRDYEVAETSSSRDAAREDRETKEGRERRGDGRSDRRGDSTSTSRDPTRDRDRDTKDS
TREPRTTETTSTRSGRDPLEYRDRDREREREREKEKERERERGEREKTDRKEEAVPEETR
GYGRGHGREEGGRTEGRGEVRGETRTESRAERPGRGRGREADASDKGSSGSTRNARGSQL
ESGGHDGWDSRSGGGFREKSAERSTDRGAERGGAERGGAERDRYDGDRRGGEQATGRDSS
YDRRGGHTDRGDRRENRERDQRASSPGRHPARGEEPDREETRGRDERRGEEKGGDRREDR
AREREREREREREKEREREREKEREAERERVREREREREREREREKEKEREKERERERER
EEREREREERDRERKEREREREREREREREQRERERQREWEEREKGRDERRERTRDEPRD
DRSVRDSHEDRKTSRKRHRVETTPSPTRPSPKRARDAPPGDGEEYNSPEEKSERLIGGGQ
PKVRPTSGPGPITILPVTVPVCPPPPVLDSVEKHRLLSQVVLPPQEPLLRSPPSTSVAED
TKPSRWKDEERRGGGDKREGRSRRNEEADARGDRGGAGRGGERRGEHPSDSNTPVSASGS
DSRRGKERDGGEPTPPPPPVALVTEDRDAPVPSGHEEGKKKTKSQKKGLKKGRKEEGVAG
GVSGAPERFTNPEPPSSMALSDGPPPPLLSPRKAPKKKALDKKRKRSRGAESDASEEEPG
SSHLPPGKRNKRGPRTPPPAPKEALLSQRAVPHSVAEPLPQPVKMDANFSDWSDEDVLER
GGVSAAVKAPPTVPTERTPTEALPRRGGPRGGKERERVERPVPPPIAPLLSQDPPMLLQT
LPPQPLMSQPLLRKPPPEQKRSSSMGSNQSRASSRRLRSPSNESAHREDPQQGQGPGRPR
RGHQLQGGNSRDRERERERDRERERERGERERGPVVTEPPVVRGEERKSRIDQLRRGEPS
RSTSSDRQDSRSHSSRRSSPESERQVQSRAGSYDGREREREREREREQFERERERKDLRQ
QQGPPGPLPPLQQQGQQRDWEPEGPREWGGRGREPLLMRGGNREQMRERDLRDMRGERER
LLPEGLLQQHERERERERGGNRGVGRGGDHGNDRERERMLLMDLPPHGDPKNRMDMRGDR
PDMRGDRPDLRGDMRGDMRPDVRGDIRGDMRGDMRGDIRGDMRPDMRGDIRGDMRGDMRG
DMRPDIRGDIRGDMRPDMRGDIRGDMRGDIRGDMRGDIRGDMRPDMRGDIRGDMRGDMRP
DMRGDIRGDMRPDIRGDIRGDMRPDMRGDIRGDMRPDMRGDIRGDMRPDIRGDIRGDMRP
DMRGDMRGGPDIRADIRPDHMRPDIRGPDRVEFSLLLPHEALGHSGMDQDKPGNSHHPVG
GEIQEAEKQDSIDDEDDAKADDAVSVVSGGEEYEPISDDELDEILADSAQKREDGQEEEK
TPGPLDVIDVDWSSLMPKQKQEPRAAGAALLRFTPGAVLLRAGVSKRLAGPELLERVREV
CKKELDDPKDADKLFEHDLGALNKAALNRKVERAGLLRNLGPCCKALCARRDMAIRRQLL
KNEKGLTKQMYPSVPVVDSELFQLSMRLFKKTVAAARSNQPPLGPPAGPEKADKGPLGLV
PAASPAAKPGTPQPPEMCVS
NT seq
6543 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagataaggcggagggtaacagtggagaattctaaaaccatatctgacagcagc
agtagccagaccagcaccaccccgtctcgccggcccagcgtgtttgaaagactcggcccc
agcactggtagtaatgctgtcgaggtgtgtacctctacacctgcatctaacccactgaca
gatacatcacatgcatgtccagagaagactaattgtagaaattggttgaagactgggaat
tgcagttacggcaatacttgtcgctacacacatggaactcagccacgaggcaaaggattt
agtggatcttttagcaggtcagcggaaagaccaactggcgatctgcgagagaggatgaag
aataagaggcaggatgttgaatcagatgctacaaagagagacccagaggagcctacgtcc
cccacagccagacagcgagactcgtcccgaggccgccacagggagaaggaagatataaaa
atcactaaagagagaacccctgccagcgaagaagagaccaccgagtgggaagccaaccgc
gaagactcggataacggcgactacgactacgaattgtccctagagatgaagaggcagaag
atccagcgggagctcatgaagttggagcaggagaatatggagaaaagagaggacattgtt
atcaagaaggaggtaccggagccgaccaccaaaactaggaccactatcatatccaagaca
tccccggagcgttccagctctaaaggttccccctcctccaggaagtccagtggatctccc
aaacacactaaaggacctaaagcttccggttctaggaagaaggagaagaagacctctgtg
tcgtcctctgcgtccgccacggccagatcttccaaggggggccacgggaagaagaaaggt
ccccgcacccccagccctcctcctccggtgctgccgctggtgaaccctgtcgtggcagcc
ggggggaagaaacacaaggggaagcacaagaacaaggagaagtgtgaggagaagccgccc
aaggagggaaaggagagagggagagatgcggagaaacacaaggagaagaaggagaaacgc
agagaccggtcagacagctcccacaagaccaagcggtcagtgatgtctgaggaacgttcc
ggcagcgtgtcctctccttccagagaccgagagatgtccccgtcagccaggaagaacaag
tccacctccccaaaagtagcctcccagaagacccttgcgcctgcctccccacctcacagg
tctccccctccccgccacaagcgcacccccaccccgccccgccaccactccccctcctcc
cactctggctcctcagcccagagacactctccttccccccgccggcgccgctcggcatcc
cccgcctacaaccgcgagcccccagccgcctcctcacctcctggccagaggtgttcctcc
cgctcccctgcagcctcccgggacacctcctctcctcagaggaggactagccccggagga
cgaaaccactctcgggggcgtgagagaggacgcagcgagagggggaggagcccacctgcc
caggagcaccgacacgagcgtcgagacgagagccgcgggaagcgagagaaagactgtagc
cgtgacgaccgggactacgaggtggcagagacgagctcttctcgtgatgctgcccgtgag
gaccgggagacaaaagaggggcgagagcgccggggtgacgggcgcagcgaccgacgagga
gactccaccagtacctccagggaccccaccagggatagagaccgggacaccaaggactcg
acccgggaacccagaaccacagagaccacgtcaacacgctccggacgagaccctctggag
tacagggaccgggatcgagaacgggagagggagcgagaaaaggagaaagagagggagcgg
gagagaggagagagggagaagacggacaggaaggaggaggctgtcccggaggagacgagg
ggctatgggaggggccacgggcgagaggaaggagggaggactgaagggaggggggaggta
cggggggagacgaggacagagagtagagctgagagacctggcaggggtaggggccgcgag
gctgacgcatctgacaaaggctcctcaggctccacccggaatgcccgaggctcccagctg
gagagtggtggtcatgacggttgggactcacgtagcggcggaggcttccgtgagaagagt
gcggagaggagcaccgaccgtggggcggagagaggaggcgcagagagaggaggagcggag
cgtgaccgttatgacggagacaggagaggaggggagcaggcgactgggagagactcatcc
tacgaccgtagaggtggtcacaccgaccgtggtgaccgcagagagaacagggagagagac
caaagagcatcctctcctggtcggcacccagccagaggagaagagccagacagggaggag
accagagggagggatgaacgcagaggagaggaaaaaggaggggacagacgagaggacaga
gcccgagagagggagcgagagagggaacgggaaagagagaaggagagggaaagagagaga
gagaaggagagggaggcagagcgggagagggtccgggagagggagcgagaacgggagcga
gagagggagagggaaaaggagaaagagagggaaaaggagcgagagagggaacgggagagg
gaagagagggagcgggagagggaggagcgagatagggagaggaaggagagagagcgggag
agggaacgagagcgggagagggagcgagagcaaagagagagggagaggcagcgggaatgg
gaggaacgtgagaaaggaagggatgagcgacgggaacggactagggatgaaccaagggac
gaccgctctgtccgagactcgcatgaagaccgcaagaccagccggaagaggcacagggta
gagaccacacccagcccgactcgcccctctcccaagcgagcaagggacgcccccccagga
gacggcgaggaatacaacagccctgaagagaaaagtgagcgtttgattggtggaggccag
cccaaggtccgccccacctctggccctggcccaatcaccatcctccccgtcacagtacca
gtgtgtcctcctcctccagtgcttgacagtgttgagaaacaccggctgttgagtcaggtg
gtactcccgccccaggagcccctcctgcgttccccccccagcacctctgtagcggaggac
accaagcccagccgctggaaggacgaggagcgccgtggaggcggggacaagagggagggg
aggagccgccggaacgaggaggccgacgcccgtggagacagaggaggagcaggcagagga
ggggagagacggggggagcacccctcagatagcaatacccctgtctcggcctccggctcg
gactctaggagaggtaaagagagggacggtggggagcccacccctcccccgccgcccgtg
gccctggtcactgaggacagagacgctccagtcccgtcaggtcatgaggagggcaagaag
aagactaagtcccagaagaaaggcctgaagaaggggaggaaggaggagggtgtggcagga
ggtgtttcaggagctccagagaggttcaccaacccagagcccccctcctccatggccctc
tcggacggccccccgccccctctcctctccccccgcaaagcgcctaagaagaaggcgctg
gacaagaagaggaaacgatcccgtggcgccgagtcggacgcgtctgaggaggaaccaggc
tcctcccatcttcccccgggcaagaggaacaagaggggtccccggacgcccccgcccgcg
ccaaaggaggctctgctatcccagagggccgtgccacattctgttgcagagcccttgcca
cagcccgtcaaaatggacgccaacttcagcgactggtctgacgaggatgtgctggagcgc
ggtggtgtatcggcggctgttaaggcaccccccacagtccccactgagaggactccgacc
gaagctcttcccaggagaggaggtccgagggggggcaaggagagggagagggtggagagg
cctgttcccccgcccatcgcccctctgctgtcccaggaccctcctatgttactccagacc
ctgcctccccagcccctcatgtcccagcccctgctgaggaagcctcctccggagcagaag
aggagcagcagtatgggaagcaaccagagcagggcctcatccagacgtctccgctctccc
tccaacgagtcagcccacagagaggaccctcagcagggccaaggaccaggccgacccagg
agaggacaccagctccaggggggcaactcccgagaccgggaacgagaaagggagcgagac
agggaaagagagagggagcgtggtgagagagagaggggaccagttgtcacagaacctccg
gtggtgaggggagaggagcggaagtcacgcatcgaccagctgaggagaggagagcccagt
cgcagcacctcctcagaccggcaggactctcgcagccacagctccagacgaagctcccct
gagtcagagcggcaggtgcagtcgcgggccgggtcctacgacggccgagagcgtgagagg
gagagagagagggagcgggaacagtttgagagggagcgggagcgcaaggacctccgacag
cagcaggggcctccggggccactacctcctctccagcagcaggggcagcagagagactgg
gagcccgaggggccacgggagtggggtgggaggggccgtgaacccctcctcatgcgtgga
ggcaacagagagcaaatgagagagcgtgatctccgtgacatgcggggtgagagagagagg
cttctgcccgagggtctcctgcagcagcacgaacgagagcgggaaagagagcgcggcggc
aacaggggcgttggccgcggtggcgaccatggcaacgaccgggagcgggagaggatgctg
ctgatggacctgccgccacatggggaccccaagaacaggatggacatgaggggagacaga
ccagatatgaggggagacagaccagatttaagaggggacatgcgaggagatatgagacct
gatgtgaggggagacattcgaggggatatgagaggagatatgagaggagacattcgagga
gatatgagacctgatatgaggggagacattcgaggggatatgagaggagatatgagggga
gacatgagacctgatattaggggagacattcgaggggacatgagacccgatatgagggga
gacattcgaggggacatgaggggagacattcgaggggacatgaggggagacattcgaggg
gacatgagacctgatatgaggggagacattcgaggggatatgaggggggacatgagacct
gatatgaggggagacattcgaggggacatgagacctgatattaggggagacattcgaggg
gacatgagacctgatatgaggggagacattcgaggggacatgagacctgatatgagggga
gacattcgaggggacatgagacctgatattaggggagacattcgaggggacatgagaccc
gatatgaggggggatatgagagggggaccagatataagagcggacataaggccagatcac
atgagaccagatatcagggggccggacagggttgagttctctctcctgctcccccacgaa
gctttgggacacagcggcatggaccaggacaaaccaggcaacagccatcaccctgtggga
ggagagatacaggaagcagagaaacaggacagcattgacgacgaagatgacgcgaaggcg
gatgacgctgtgtcggtggtgtctggcggggaggagtacgagccaatcagtgatgacgag
ttggatgagatcttggcggacagcgcccagaagagagaggatgggcaggaagaagagaag
acgccaggtcccctggatgtgattgatgtggactggtccagccttatgcccaagcagaag
caggagccccgggcggcaggggcagctctgctccggttcaccccaggggcagtgctcctc
agggcgggcgtctccaagcggctggctgggcccgagctcctggagagagtcagggaggtc
tgcaagaaggagctggacgaccctaaagatgctgacaagctgtttgagcacgacctgggt
gctctgaacaaggcagctctgaacaggaaggtagagagggcaggtctgctgaggaacctg
ggcccctgctgtaaggccctctgtgcccgcagggacatggccatcagacggcagctcctc
aagaacgaaaagggcctgaccaagcagatgtaccccagtgttcctgtggtggacagtgag
ctcttccaactcagcatgcgtctcttcaagaaaactgtagccgccgccagaagcaaccag
cccccgttggggcccccagcaggcccagagaaggccgacaaggggccactggggctggta
ccggcagcttcaccggcagccaagcccggtacaccacagccccccgagatgtgtgtctcc
tga
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integrated database retrieval system
