Salmo trutta (river trout): 115188732
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Entry
115188732 CDS
T08542
Name
(RefSeq) zinc finger CCCH domain-containing protein 13-like isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115188732
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
115188732
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
115188732
NCBI-ProteinID:
XP_029603358
LinkDB
All DBs
Position
Unknown
AA seq
2178 aa
AA seq
DB search
MSKIRRRVTVENSKTISDSSSSQTSTTPSRRPSVFERLGPSTGSNAVEVCTSTPASNPLT
DTSHACPEKTNCRNWLKTGNCSYGNTCRYTHGTQPRGKGFSGSFSRSAERPTGDLRERMK
NKRQDVESDATKRDPEEPTSPTARQRDSSRGRHREKEDIKITKERTPASEEETTEWEANR
EDSDNGDYDYELSLEMKRQKIQRELMKLEQENMEKREDIVIKKEVPEPTTKTRTTIISKT
SPERSSSKGSPSSRKSSGSPKHTKGPKASGSRKKEKKTSVSSSASATARSSKGGHGKKKG
PRTPSPPPPVLPLVNPVVAAGGKKHKGKHKNKEKCEEKPPKEGKERGRDAEKHKEKKEKR
RDRSDSSHKAKRSVMSEERSGSVSSPSRDREMSPSARKNKSTSPKVASQKTLAPASPPHR
SPPPRHKRTPTPPRHHSPSSHSGSSAQRHSPSPRRRRSASPAYNREPPAASSPPGQRCSS
RSPAASRDTSSPQRRTSPGGRNHSRGRERGRSERGRSPPAQEHRHERRDESRGKREKDCS
RDDRDYEVAETSSSRDAAREDRETKEGRERRGDGRSDRRGDSTSTSRDPTRDRDRDTKDS
TREPRTTETTSTRSGRDPLEYRDRDREREREREKEKERERERGEREKTDRKEEAVPEEGR
GYGRGHGREEGGRTEGRGEVRGETRTESRAERPGRGRGREADASDKGSSGSTRNARGSQL
ESGGHDGWDSRSGGGFREKSAERSTDRGAERGGAERGGAERDRYDGDRRGGEQATGRDSS
YDRRGGHTDRGDRRENRERDQRASSPGRHPARGEEPDREETRGRDERRGEEKGGDRREDR
AREREREREREREKEREREREKEREAERERVREREREREREREREKEKEREKERERERER
EEREREREERDRERKEREREREREREREREQRERERQREWEEREKGRDERRERTRDEPRD
DRSVRDSHEDRKTSRKRHRVETTPSPTRPSPKRARDAPPGDGEEYNSPEEKSERLIGGGQ
PKVRPTSGPGPITILPVTVPVCPPPPVLDSVEKHRLLSQVVLPPQEPLLRSPPSTSVAED
TKPSRWKDEERRGGGDKREGRSRRNEEADARGDRGGAGRGGERRGEHPSDSSTPVSASGS
DSRRGKERDGGEPTPPPPPVALVTEDRDAPVPSGHEEGKKKTKSQKKGLKKGRKEEGVAG
GVSGAPERFTNPEPPSSMALSDGPPPPLLSPRKAPKKKALDKKRKRSRGAESDASEEEPG
SSHLPPGKRNKRGPRTPPPAPKEALLSQRAVPHSVAEPLPQPVKMDANFSDWSDEDVLER
GGVSAAVKAPPTVLTERTPTEALPRRGGPRGGKERVERPVPPPIAPLLSQDPPMLLQTLP
PQPLMSQPLLRKPPPEQKRSSSMGSNQSRASSRRLRSPSNESAHREDPQQGQGPGRPRRG
HQLQGGNSRDRERERERDRERERERGERERGPVVTEPPVVRGEERKSRIDQLRRGEPSRS
TSSDRQDSRSHSSRRSSPESERQVQSRAGSYDGREREREREREREQFERERERKDLRQQQ
GPPGPLPPLQQQGQQRDWEPEGPREWGGRGREPLLMRGGNREQMRERDLRDMRGERERLL
PEGLLQQHERERERERGGNRGVGRGGDHGNDRERERMLLMDLPPHGDPKNRMDMRGDRPD
MRGDRPDLRGDMRGDMRPDVRGDIRGDMRGDMRGDIRGDMRPDMRGDIRGDMRGDMRGDM
RPDIRGDIRGDMRPDMRGDIRGDMRGDIRGDMRGDIRGDMRPDMRGDIRGDMRGDMRPDM
RGDIRGDMRPDIRGDIRGDMRPDMRGDIRGDMRPDMRGDIRGDMRPDIRGDIRGDMRPDM
RGDMRGGPDIRADIRPDHMRPDIRGPDRVEFSLLLPHEALGHSGMDQDKPGNSHHPVGGE
IQEAEKQDSIDDEDDAKADDAVSVVSGGEEYEPISDDELDEILADSAQKREDGQEEEKTP
GPLDVIDVDWSSLMPKQKQEPRAAGAALLRFTPGAVLLRAGVSKRLAGPELLERVREVCK
KELDDPKDADKLFEHDLGALNKAALNRKVERAGLLRNLGPCCKALCARRDMAIRRQLLKN
EKGLTKQMYPSVPVVDSELFQLSMRLFKKTVAAARSNQPPLGPPAGPEKADKGPLGLVPA
ASPAAKPGTPQPPEMCVS
NT seq
6537 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagataaggcggagggtaacagtggagaattctaaaaccatatctgacagcagc
agtagccagaccagcaccaccccgtctcgccggcccagcgtgtttgaaagactcggcccc
agcactggtagtaatgctgtcgaggtgtgtacctctacacctgcatctaacccactgaca
gatacatcacatgcatgtccagagaagactaattgtagaaattggttgaagactgggaat
tgcagttacggcaatacttgtcgctacacacatggaactcagccacgaggcaaaggattt
agtggatcttttagcaggtcagcggaaagaccaactggcgatctgcgagagaggatgaag
aataagaggcaggatgttgaatcagatgctacaaagagagacccagaggagcctacgtcc
cccacagccagacagcgagactcgtcccgaggccgccacagggagaaggaagatataaaa
atcactaaagagagaacccctgccagcgaagaagagaccaccgagtgggaagccaaccgc
gaagactcggataacggcgactacgactacgaattgtccctagagatgaagaggcagaag
atccagcgggagctcatgaagttggagcaggagaatatggagaaaagagaggacattgtt
atcaagaaggaggtaccggagccgaccaccaaaactaggaccactatcatatccaagaca
tccccggagcgttccagctctaaaggttccccctcctccaggaagtccagtggatctccc
aaacacactaaaggacctaaagcttccggttctaggaagaaggagaagaagacctctgtg
tcgtcctctgcgtccgccacggccagatcttccaaggggggccacgggaagaagaaaggt
ccccgcacccccagccctcctcctccggtgctgccgctggtgaaccctgtcgtggcagcc
ggggggaagaaacacaaggggaagcacaagaacaaggagaagtgtgaggagaagccgccc
aaggagggaaaggagagagggagagatgcggagaaacacaaggagaagaaggagaaacgc
agagaccggtcagacagctcccacaaggccaagcggtcagtgatgtctgaggaacgttcc
ggcagcgtgtcctctccttccagagaccgagagatgtccccgtcagccaggaagaacaag
tccacctccccaaaagtagcctcccagaagacccttgcgcctgcctccccacctcacagg
tctccccctccccgccacaagcgcacccccaccccgccccgccaccactccccctcctcc
cactctggctcctcagcccagagacactctccttccccccgccggcgccgctcggcatcc
cccgcctacaaccgcgagcccccagccgcctcctcacctcctggccagaggtgttcctcc
cgctcccctgcagcctcccgggacacctcctctcctcagaggaggactagccccggagga
cgaaaccactctcgggggcgtgagagaggacgcagcgagagggggaggagcccacctgcc
caggagcaccgacacgagcgtcgagacgagagccgcgggaagcgagagaaagactgtagc
cgtgacgaccgggactacgaggtggcagagacgagctcttctcgtgatgctgcccgtgag
gaccgggagacaaaagaggggcgagagcgccggggtgacgggcgcagcgaccgacgagga
gactccaccagtacctccagggaccccaccagggatagagaccgggacaccaaggactcg
acccgggaacccagaaccacagagaccacgtcaacacgctccggacgagaccctctggag
tacagggaccgggatcgagaacgggagagggagcgagaaaaggagaaagagagggagcgg
gagagaggagagagggagaagacggacaggaaggaggaggctgtcccggaggaggggagg
ggctatgggaggggccacgggcgagaggaaggagggaggactgaagggaggggggaggta
cggggggagacgaggacagagagtagagctgagagacctggcaggggtaggggccgcgag
gctgacgcatctgacaaaggctcctcaggctccacccggaatgcccgaggctcccagctg
gagagtggtggtcatgacggttgggactcacgtagcggcggaggcttccgtgagaagagt
gcggagaggagcaccgaccgtggggcggagagaggaggcgcagagagaggaggagcggag
cgtgaccgttatgacggagacaggagaggaggggagcaggcgactgggagagactcatcc
tacgaccgtagaggtggtcacactgaccgtggtgaccgcagagagaacagggagagagac
caaagagcatcctctcctggtcggcacccagccagaggagaagagccagacagggaggag
accagagggagggatgaacgcagaggagaggaaaaaggaggggacagacgagaggacaga
gcccgagagagggagcgagagagggaacgggaaagagagaaggagagggaaagagagagg
gagaaggagagggaggcagagcgggagagggtccgggagagggagcgagaacgggagcga
gagagggagagggaaaaggagaaagagagggaaaaggagcgagagagggaacgggagagg
gaagagagggagcgggagagggaggagcgagatagggagaggaaggagagagagcgggag
agggaacgagagcgggagagggagcgagagcaaagagagagggagaggcagcgggaatgg
gaggaacgtgagaaaggaagggatgagcgacgggaacggactagggatgaaccaagggac
gaccgctctgtccgagactctcatgaagaccgcaagaccagccggaagaggcacagggta
gagaccacacccagcccgactcgcccctctcccaagcgagcaagggacgcccccccagga
gacggcgaggaatacaacagccctgaagagaaaagtgagcgtttgattggtggaggccag
cccaaggtccgccccacctctggccctggcccaatcaccatcctccccgtcacagtacca
gtgtgtcctcctcctccagtgcttgacagtgttgagaaacaccggctgttgagtcaggtg
gtactcccgccccaggagcccctcctgcgttccccccccagcacctctgtagcggaggac
accaagcccagccgctggaaggacgaggagcgccgtggaggcggggacaagagggagggg
aggagccgccggaacgaggaggccgacgcccgtggagacagaggaggagcaggcagagga
ggtgagagacggggggagcacccctcagatagcagtacccctgtctcggcctccggctcg
gactctaggagaggtaaagagagggacggtggggagcccacccctcccccgccgcccgtc
gccctggtcactgaggacagagacgctccagtcccgtcaggtcatgaggagggcaagaag
aagactaagtcccagaagaaaggcctgaagaaggggaggaaggaggagggtgtggcagga
ggtgtttcaggagctccagagaggttcaccaacccagagcccccctcctccatggccctc
tcggacggccccccgccccctctcctctccccccgcaaagcgcctaagaagaaggcgctg
gacaagaagaggaaacgatcccgtggcgccgagtcggacgcgtctgaggaggaaccaggc
tcctcccatcttcccccgggcaagaggaacaagaggggtccccggacgcccccgcccgcg
ccaaaggaggctctgctatcccagagggccgtgccacattctgttgcagagcccttgcca
cagcccgtcaaaatggacgccaacttcagcgactggtctgacgaggatgtgctggagcgc
ggtggtgtatcggcggctgttaaggcaccccccacagtcctcactgagaggactccgacc
gaagctcttcccaggagaggaggtccgagggggggcaaggagagggtggagaggcctgtt
cccccgcccatcgcccctctgctgtcccaggaccctcctatgttactccagaccctgcct
ccccagcccctcatgtcccagcccctgctgaggaagcctcctccggagcagaagaggagc
agcagtatgggaagcaaccagagcagggcctcatccagacgtctccgctctccctccaac
gagtcagcccacagagaggaccctcagcagggccaaggaccaggccgacccaggagagga
caccagctccaggggggcaactcccgagaccgggaacgagaaagggagcgagacagggaa
agagagagggagcgtggtgagagagagaggggaccagttgtcacagaacctccggtggtg
aggggagaggagcggaagtcacgcatcgaccagctgaggagaggagagcccagtcgcagc
acctcctcagaccggcaggactctcgcagccacagctccagacgaagctcccctgagtca
gagcggcaggtgcagtcgcgggccgggtcctacgacggccgagagcgtgagagggagaga
gagagggagcgggaacagtttgagagggagcgggagcgcaaggacctccgacagcagcag
gggcctccggggccactacctcctctccagcagcaggggcagcagagagactgggagccc
gaggggccacgggagtggggtgggaggggccgtgaacccctcctcatgcgtggaggcaac
agagagcaaatgagagagcgtgatctccgtgacatgcggggtgagagagagaggcttctg
cccgagggtctcctgcagcagcacgaacgagagcgggaaagagagcgcggcggcaacagg
ggcgttggccgcggtggcgaccatggcaacgaccgggagcgggagaggatgctgctgatg
gacctgccgccacatggggaccccaagaacaggatggacatgaggggagacagaccagat
atgaggggagacagaccagatttaagaggggacatgcgaggagatatgagacctgatgtg
aggggagacattcgaggggatatgagaggagatatgagaggagacattcgaggagatatg
agacctgatatgaggggagacattcgaggggatatgagaggagatatgaggggagacatg
agacctgatattaggggagacattcgaggggacatgagacccgatatgaggggagacatt
cgaggggacatgaggggagacattcgaggggacatgaggggagacattcgaggggacatg
agacctgatatgaggggagacattcgaggggatatgaggggggacatgagacctgatatg
aggggagacattcgaggggacatgagacctgatattaggggagacattcgaggggacatg
agacctgatatgaggggagacattcgaggggacatgagacctgatatgaggggagacatt
cgaggggacatgagacctgatattaggggagacattcgaggggacatgagacccgatatg
aggggggatatgagagggggaccagatataagagcggacataaggccagatcacatgaga
ccagatatcagggggccggacagggttgagttctctctcctgctcccccacgaagctttg
ggacacagcggcatggaccaggacaaaccaggcaacagccatcaccctgtgggaggagag
atacaggaagcagagaaacaggacagcattgacgacgaagatgacgcgaaggcggatgac
gctgtgtcggtggtgtctggcggggaggagtacgagccaatcagtgatgacgagttggat
gagatcttggcggacagcgcccagaagagagaggatgggcaggaagaagagaagacgcca
ggtcccctggatgtgattgatgtggactggtccagcctgatgcccaagcagaagcaggag
ccccgggcggcaggggcagctctgctccggttcaccccaggggcagtgctcctcagggcg
ggcgtctccaagcggctggctgggcccgagctcctggagagagtcagggaggtctgcaag
aaggagctggacgaccctaaagatgctgacaagctgtttgagcacgacctgggtgctctg
aacaaggcagctctgaacaggaaggtagagagggcaggtctgctgaggaacctgggcccc
tgctgtaaggccctctgtgcccgcagggacatggccatcagacggcagctcctcaagaac
gaaaagggcctgaccaagcagatgtaccccagtgttcctgtggtggacagtgagctcttc
caactcagcatgcgtctcttcaagaaaactgtagccgccgccagaagcaaccagcccccg
ttggggcccccagcaggcccagagaaggccgacaaggggccactggggctggtaccggca
gcttcaccggcagccaagcccggtacaccacagccccccgagatgtgtgtctcctga
DBGET
integrated database retrieval system
