KEGG   Salmo trutta (river trout): 115188778
Entry
115188778         CDS       T08542                                 
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
stru  Salmo trutta (river trout)
Pathway
stru03082  ATP-dependent chromatin remodeling
stru03083  Polycomb repressive complex
stru04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    115188778
   03083 Polycomb repressive complex
    115188778
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    115188778
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:stru03036]
    115188778
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     115188778
  Histone modification proteins
   HAT complexes
    HATB complex
     115188778
   HDAC complexes
    Sin3A-HDAC complex
     115188778
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     115188778
    PRC2.2
     115188778
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     115188778
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    115188778
  Chromatin remodeling factors
   NuRD complex
    115188778
   NuRF complex
    115188778
   NuRF complex (fruit fly)
    115188778
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML WD_LRWD1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 eIF2A WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_RIG_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 115188778
NCBI-ProteinID: XP_029603486
Ensembl: ENSSTUG00000026627
LinkDB
Position
Unknown
AA seq 427 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPDGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA
EDGPPELLFIHGGHTAKISDFTWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPAS
ELEGQGS
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggcggataaagaagtgtacgacgatgcagttgaggagcgggtgatcaatgaagaatat
aaaatctggaagaagaatactcctttcctctatgacctggtgatgacccacgcgctggag
tggcccagtctcactgtgcagtggctacctgacgtcaacaggccggatggaaaggactac
gcggttcacagactggtactgggaactcacacgtcagatgagcagaatcacctggtgatc
gccagcgtgcaggtccccaacgatgacgcccagtttgatgcttcccactacgacagcgaa
aaaggagcagaatttggaggttttggatcagtgagtggaaagatagagattgagatcaag
ataaaccacgagggtgaagtgaaccgggccaggtacatgcctcagaacccctgcatcatt
gctaccaagacccccacctcagacgtactggtctttgactacaccaagcacccttccaaa
ccagaccccagtggtgagtgcagcccagacctgcgcctgcggggccaccagaaggagggc
tacggcctgtcctggaaccccaacctcagtggcaacctgctcagtgcttctgatgaccac
acgatctgcctgtgggacattggtgctggtcctaaggaggggaagatagtggatgctaag
acaatcttcaccggtcacactgcagtggtggaggacgtgtcctggcacctgctccatgaa
tcactgtttggctctgtggccgacgaccagaaactcatgatctgggacacacggtccaac
aacacgtccaagcccagccatgcagtggatgcccacactgcagaggtcaactgtctgtcc
ttcaacccctacagcgagttcatcctagccaccggctctgcagacaagactgttgctctc
tgggatctgcgtaacctcaaactgaagctccactctttcgaatcgcacaaggatgaaatc
ttccagcaggtgcaatggtcccctcacaacgaaaccattctggcttccagcggcacagat
agaaggctcaacgtatgggatctcagtaaaatcggagaggaacagtctgctgaagatgca
gaggacggacctccagaactcctgttcatccatggaggacacacagcgaagatttctgat
ttcacatggaaccccaacgagccatgggtcatctgctccgtctccgaggataacatcatg
caggtttggcaaatggctgagaacatctataatgatgaggagcctgacacccctgcttca
gagctggagggtcaagggtcgtaa

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