Salmo trutta (river trout): 115188865
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Entry
115188865 CDS
T08542
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03440
Homologous recombination
stru03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115188865
03460 Fanconi anemia pathway
115188865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stru03032
]
115188865
03400 DNA repair and recombination proteins [BR:
stru03400
]
115188865
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
115188865
DNA replication proteins [BR:
stru03032
]
Eukaryotic type
DNA Topoisomerases
115188865
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
115188865
FA (Fanconi anemia) pathway
115188865
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Zn_ribbon_recom
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
115188865
NCBI-ProteinID:
XP_029603551
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MIRRTPIKRVLCVAEKNDAAKCIADIMSNGRMRRSEGLSVYNKLYEFEYNLFGQNVTVCM
TSVSGHLLGLEFKAQFQKWHSCNPVLLFDAEVEKYCPENFVQIKRTLEREVSQCQVLVIW
TDCDREGENIGFEVIDVCKAVKPGVQVFRARFSEITPNSIRRACDTLTEPDGNVSDAVDV
RQELDLRIGASFTRFQTLRLQKIFPASLANQLISYGSCQFPTLGFVVERFKSIQAFIPET
FYKIRVLHEVEEDSVEFSWKRNRLFNHTACLVLYQICMEDPIATVTSVTSKPKSKWRPLP
LDTVEMEKLVSRKLRIGAKETMKIAEKLYTQGLISYPRTETNLFPKDLALGPLVEHQTHS
PAWGAFARGVMEQPGGPNPRQGTKTDQAHPPIHPIKYTNTLQGNEQRVYEFIVRHFLACV
SLDAVGQETVVEVEIAHERFSANGLMIIRRNYLDVYPYDRWSTKVIPVYEQGSQFQPSAI
EMLDGQTSPPQLLTESDLISLMEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGELG
MGLVEGYNSMGYEMSKPDLRAELEADLKLVSEGRKDKQSVLRHHIHKYKTVFVESVKKAK
RLDEALSNYLGAAQEFSESEQQDMEMPLPVRKCPQCGRDMVLRRRKEGNGKYLSCVGYPE
CKCSVWFPDTVLEVNRDESVCPTCQPSPVHMLKLKFRRGSLPPMMPLEFVGCIGGCDETL
REVLNLKYLRVVGGGGVAGGVGGGGGAAGGGRGGGRGDTATNQPRPRPAPRPRPDPLSPQ
APNPPSSSWPPHHPRPDPQATPPDPRGGDITVCNCGSEAVLLTVRKDGPNQGRQFYKCSS
GGCNFFLWADQPNTNIYPPGPQGAPPSRPQQPPRTSVGVGGGGGEVVCNCSEPAVQRTVQ
KEGPNKGRVFHTCGKPRDQQCGFFLWADENIPPPGSGGYGGGGGDWGKRGRETGGGGAPT
TTKPPAARKPRTCGICHLPGHTRVTCPQR
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgatccggcggactccgatcaaacgggttctctgtgtggcggagaagaatgacgcggcc
aagtgcatcgcggacatcatgtccaacggcagaatgaggaggagtgaggggctgtctgtc
tataataaactctatgagtttgaatacaacctgtttggacagaatgtgacagtgtgtatg
acgtcggtgtccggacatctgctggggttggagtttaaggcgcagttccagaaatggcac
agctgtaatcctgtcctgctgtttgatgccgaggtggagaagtattgtcctgagaacttt
gttcagatcaagcggaccctagagagagaggtgagtcagtgccaggtgctcgtcatctgg
acagattgtgacagagagggagagaacattggctttgaggttatagacgtctgtaaagca
gtcaagcccggtgtgcaggtgttccgcgcccggttctctgagatcactcccaactctatc
aggagagcatgcgacacgttaacggaaccggacggtaacgtcagcgatgctgtggacgta
cggcaggagctggacctcaggataggtgcatcgtttaccaggttccagacactccgcctc
cagaaaatcttccctgcctcgttagccaatcaactgatctcgtatggcagctgccagttc
cctacgctgggattcgttgtggaacgcttcaaatcaatccaggcatttataccggagaca
ttctacaagatcagagtcctccatgaggtagaggaagactcagtagagttcagctggaag
aggaacagactattcaaccacacagcctgtctagtgctctaccagatctgtatggaggat
cccatagcaaccgtcacctcggtaaccagtaaacccaaaagcaagtggaggccgctgccc
ctggacacagtggaaatggagaagctggtttccaggaagttgagaatcggcgccaaagag
accatgaagatcgctgagaaactatacacacaggggttaatcagttatccgcgtacagag
accaacctgtttcctaaggacctggccctgggccccctggtggagcatcagacacacagc
cccgcctggggagccttcgctaggggggtgatggagcagccagggggtcccaacccacga
cagggcaccaagacagatcaggcccatccccctatacaccccatcaagtacaccaacaca
ctacagggcaacgagcagcgtgtgtatgagttcatcgtgcgtcacttcctggcgtgcgta
tcccttgatgctgtggggcaggaaacagtggttgaggtggaaatcgctcacgagaggttc
tccgctaacggcctcatgatcatcaggaggaactacctggacgtgtacccctacgaccgc
tggagcactaaggtgatcccagtgtatgaacagggtagccagttccagccgtcagccata
gagatgttggatggccagacctcccctcctcaactcctcacagagtcagacctcatatca
ctgatggagaaacatggcatcggtacggatgctacccacgcagatcacattgagaccata
aagagccgtatgtacgtgggactaacagctgatcagaggtttctaccaggagagctgggg
atgggactggtggaggggtataactccatgggctatgagatgtcgaagcccgacctgcgg
gccgagctggaggcggacctgaagctggtatcggaggggaggaaggacaaacagagcgtg
ttgagacaccacattcacaaatacaagacggtcttcgtagagtctgtcaagaaagccaag
aggttggacgaggctctgtctaactatctgggcgcggcccaggagttcagcgaatcagag
cagcaggatatggagatgcccctcccagtcaggaagtgtcctcagtgtgggcgggacatg
gtgctgcggaggaggaaggaggggaacgggaagtacctgtcctgcgttggttacccagaa
tgcaagtgttccgtgtggtttcctgacacggtgttagaggtcaacagagacgagtctgtc
tgtcccacctgtcagcccagccccgttcacatgttaaagttgaagtttcgacgaggcagc
cttcctcccatgatgccgttggagtttgtcggctgcatcggagggtgtgacgagacactg
agggaggtgctcaacctcaaatacctcagagttgttggaggagggggggtggcgggagga
gtaggaggtggaggaggagcagctgggggaggaagaggaggaggaaggggagacaccgca
accaatcagcctagacctcgcccagcccctagacccagaccggaccccctgtctccccaa
gcccccaaccctccctcctcgtcctggcccccccaccaccctcgccctgacccccaggcc
acaccccctgaccccagaggtggtgacatcacggtgtgtaactgcgggtcggaggcggtc
ctcctcacggtgaggaaagacgggccgaaccagggaagacagttctataagtgttcctct
ggaggctgtaacttcttcctgtgggccgaccagcccaacactaacatttaccctccaggc
ccccagggggcgccacccagcaggccacagcagccccccaggacctccgtgggggtgggg
ggaggagggggagaggtggtgtgtaactgcagtgagccggcggttcagaggacagtgcag
aaggaaggacctaataaaggaagagttttccatacttgtgggaaacccagagatcaacag
tgtggattcttcctctgggctgacgagaacatcccaccgccaggttctggagggtatgga
gggggagggggagactgggggaagagggggagggagactgggggaggaggagcccccacc
accaccaaaccccccgccgccaggaaaccccgtacctgtggaatctgtcacctgcccgga
cacacacgtgtcacctgccctcaacgctga
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