Salmo trutta (river trout): 115188875
Help
Entry
115188875 CDS
T08542
Name
(RefSeq) DNA topoisomerase 3-alpha-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03440
Homologous recombination
stru03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115188875
03460 Fanconi anemia pathway
115188875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stru03032
]
115188875
03400 DNA repair and recombination proteins [BR:
stru03400
]
115188875
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
115188875
DNA replication proteins [BR:
stru03032
]
Eukaryotic type
DNA Topoisomerases
115188875
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
115188875
FA (Fanconi anemia) pathway
115188875
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Zn_ribbon_recom
DUF2256
Motif
Other DBs
NCBI-GeneID:
115188875
NCBI-ProteinID:
XP_029603560
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MLIHHLTRALFTSGRPLTLRFQIHRGFRVTGYKRTDSPGDMIRRTPIKRVLCVAEKNDAA
KCIADIMSNGRMRRSEGLSVYNKLYEFEYNLFGQNVTVCMTSVSGHLLGLEFKAQFQKWH
SCNPVLLFDAEVEKYCPENFVQIKRTLEREVSQCQVLVIWTDCDREGENIGFEVIDVCKA
VKPGVQVFRARFSEITPNSIRRACDTLTEPDGNVSDAVDVRQELDLRIGASFTRFQTLRL
QKIFPASLANQLISYGSCQFPTLGFVVERFKSIQAFIPETFYKIRVLHEVEEDSVEFSWK
RNRLFNHTACLVVYQICMENPIATVTSVTSKPKSKWRPLPLDTVEMEKLVSRKLRIGAKE
TMKIAEKLYTQGLISYPRTETNLFPKDLALGPLVEHQTHSPAWGAFARGVMEQPGGPNPR
QGTKTDQAHPPIHPIKYTNTLQGNEQRVYEFIVRHFLACVSLDAVGQETVVEVEIAHERF
SANGLMIIRRNYLDVYPYDRWSTKVIPVYEQGSQFQPSAIEMLDGQTSPPQLLTEADLIS
LMEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPDLR
AELEADLKLVSEGRKDKQSVLRHHIHKYKTVFVESVKKAKRLDEALSNYLGAAQEFSESE
QQDMEMPLPVRKCPQCGRDMVLRRRKEGNGKYLSCVGYPECKCSVWFPDTVLEVNRDESV
CPTCQPSPVHMVKLKFRRGSLPPMMPLEFVGCIGGCDETLREVLNLKYLRVVGGGGVAGG
GRGGGAGGGRGGGRGDTATNQPRPRPAPRPRPDPLSPQAPNPPSSSWPPHHPRPDPQATP
PDPRGGDITVCNCGSEAVLLTVRKDGPNQGRQFYKCSSGGCNFFLWADQPNTNIYPPGPQ
GAPPSRPQQPPRTSVGVGGGGGEVVCNCSEPAVQRTVQKEGPNKGRVFHTCGKPRDQQCG
FFLWADENIPPPGSGGYGGGGGD
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgctgatacaccatctgactagggctctgttcacatccggacgacctttaacgttacgg
ttccagatccacagagggtttcgcgttaccgggtataagaggacagactccccgggagac
atgatccggcggactccgatcaaacgggttctctgtgtggcggagaagaatgacgcggcc
aagtgcatcgcggacatcatgtccaacggcagaatgaggaggagtgaggggctgtctgtc
tataataaactctatgagtttgaatacaacctgtttggacagaatgtgacagtgtgtatg
acgtcggtgtccggacatctgctggggttggagtttaaggcgcagttccagaaatggcac
agctgtaatcctgtcctgctgtttgatgccgaggtggagaagtattgtcctgagaacttt
gttcagatcaagcggaccctagagagagaggtgagtcagtgccaggtgctcgtcatctgg
acagattgtgacagagagggagagaacattggctttgaggttatagacgtctgtaaagca
gtcaagcccggtgtgcaggtgttccgcgcccggttctctgagatcactcccaactctatc
aggagagcatgcgacacgttaacggaaccggacggtaacgtcagcgatgctgtggacgta
cggcaggagctggacctcaggataggtgcatcgtttaccaggttccagacactccgcctc
cagaaaatcttccctgcctcgttagccaatcaactgatctcgtatggcagctgccagttc
cctacgctgggattcgtcgtggaacgcttcaaatcaatccaggcatttataccggagaca
ttctacaagatcagagtcctccatgaggtagaggaagactcagtagagttcagctggaag
aggaacagactattcaaccacacagcctgtctagtggtctaccagatctgtatggagaat
cccatagcaaccgtcacctcggtaaccagtaaacccaaaagcaagtggaggccgctgccc
ctggacacagtggaaatggagaagctggtttccaggaagttgagaatcggcgccaaagag
accatgaagatcgctgagaaactatacacacaggggttaatcagttatccgcgtacagag
accaacctgtttcctaaggacctggccctgggccccctggtggagcatcagacacacagc
cccgcctggggagccttcgctaggggggtgatggagcagccagggggtcccaacccacga
cagggcaccaagacagatcaggcccatccccctatacaccccatcaagtacaccaacaca
ctacagggcaacgagcagcgtgtgtatgagttcatcgtgcgtcacttcctggcgtgcgta
tcccttgatgctgtggggcaggaaacggtggttgaggtggaaatcgctcacgagaggttt
tccgctaacggcctcatgatcatcaggaggaactacctggacgtgtacccctacgaccgc
tggagcactaaggtgatcccagtgtatgaacagggtagccagttccagccgtcagccata
gagatgttggatggccagacctcccctcctcaactcctcacagaggcagacctcatatca
ctgatggagaaacacggcatcggtacggatgctacgcacgcagatcacattgagaccata
aagagccgtatgtacgtgggactaacagctgatcagaggtttctaccaggagaactgggg
atgggactggtggaggggtataactccatgggctatgagatgtcgaagcccgacctgcgg
gcggagctggaggcggacctgaagctggtatcggaggggaggaaggacaaacagagcgtg
ttgagacaccacattcacaaatacaagacggtcttcgtagagtctgtcaagaaagccaag
aggttggacgaggctctgtctaactatctgggcgctgcccaggagttcagcgaatcagag
cagcaggatatggagatgcccctcccagtcaggaagtgtcctcagtgtgggcgggacatg
gtgctgcggaggaggaaggaggggaacgggaagtacctgtcctgcgttggttacccagaa
tgcaagtgttccgtgtggtttcctgacacggtgttagaggtcaacagagacgagtctgtc
tgtcccacctgtcagcccagccccgttcacatggtaaagttgaagttccgacgaggcagc
cttcctcccatgatgccgttggagtttgtcggctgcatcggagggtgtgacgagacactg
agggaggtgctcaacctgaaatacctcagagttgttggaggagggggggtggcgggagga
ggaagaggaggaggagctggtggaggaagaggaggaggaaggggagacaccgcaaccaat
cagcctagacctcgcccagcccctagacccagaccggaccccctgtctccccaagccccc
aaccctccctcctcgtcctggcccccccaccaccctcgccctgacccccaggccacaccc
cctgaccccagaggtggtgacatcacggtgtgtaactgcgggtcggaggcggtcctcctc
acggtgaggaaagacgggccgaaccagggaagacagttctataagtgttcctctggaggc
tgtaacttcttcctgtgggccgaccagcccaacactaacatttaccctccaggcccccag
ggggcgccacccagcaggccacagcagccccccaggacctccgtgggggtggggggagga
gggggagaggtggtgtgtaactgcagtgagccggcggttcagaggacagtgcagaaggaa
ggacctaataaaggaagagttttccatacttgtgggaaacccagagatcaacagtgtgga
ttcttcctctgggctgacgagaacatcccaccgccaggttctggagggtatggaggggga
gggggagac
DBGET
integrated database retrieval system
