Salmo trutta (river trout): 115188928
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Entry
115188928 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
stru04137
Mitophagy - animal
stru04144
Endocytosis
stru04340
Hedgehog signaling pathway
stru04350
TGF-beta signaling pathway
stru04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115188928
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
115188928
04350 TGF-beta signaling pathway
115188928
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115188928
04137 Mitophagy - animal
115188928
09144 Cellular community - eukaryotes
04520 Adherens junction
115188928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115188928
04121 Ubiquitin system [BR:
stru04121
]
115188928
03029 Mitochondrial biogenesis [BR:
stru03029
]
115188928
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115188928
Membrane trafficking [BR:
stru04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
115188928
Autophagy
Mitophagy
Other mitophagy associated proteins
115188928
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
HECT type E3
115188928
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
115188928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WW
C2
Laminin_G_2
DUF7350
Motif
Other DBs
NCBI-GeneID:
115188928
NCBI-ProteinID:
XP_029603622
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MSGPGSRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKRQGAGFLGCIRLLANTISRLKDTGYQRLELCK
LNPSDSDAVRGQIVVSLQTRDGLGSGGSVVDCRALLENEGPVFESCFSEEPLPYSDPTGA
AGGGTCPPDSPNQENRLQAQRIRGQDSQTPQNRPHGNQSPDLPEGYEQRTTVQGQVYFLH
TQTGVSTWHDPRIPRDLTSVSCEELGPLPAGWEVRSTVSGRIYFVDHNNRTTQFTDPRLH
TIISQHSQMKESSQPLGGGGGREMEVGGGGGRRRRGSDAALRERPGPQTEAAQTRAVAAA
TTGWTLSHRGLTRRDL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtcccgggtctcggagaaacgggtccagcatcaaaatccgcctgacagtctta
tgtgccaagaaccttgcaaagaaagacttcttccggttgccggacccatttgcgaaggta
gtggtggacggatcaggccagtgtcattctacagacacagtgaagagcactctagacccc
aaatggaaccaacactatgacctgtacatagggaagacagactccatcaccatcagtgtg
tggaaccataagaagatccacaagaggcagggagccgggttcctgggctgcatacgactg
ttggccaacaccatcagcagactgaaggacacgggctaccagcggttggagctgtgtaag
ctgaatccatcagatagtgatgcagtacggggacagatcgtagtgagcctccagaccaga
gatggtttgggcagcggaggatctgtggtcgactgtagagcactgttagagaacgagggg
cctgtgtttgagagctgtttcagtgaggagccgctgccgtactcagaccccactggcgcc
gctgggggcgggacctgtccaccggattcacccaaccaggagaaccggctccaggctcag
cgaatcagaggccaggattcccaaacccctcagaaccgaccgcatggcaaccaatcacca
gatctgcctgaaggatacgagcagcgcactacggtccagggacaggtttattttctccac
acacagacgggagtcagtacctggcacgacccacgaatacccagggacctgaccagtgtg
agctgtgaggagttgggtccgctgccggccggctgggaggtgaggagcacggtgtctgga
aggatctactttgtggatcacaacaaccgaacaacgcagttcactgaccctcggctgcac
accatcatcagccaacattcccagatgaaggagtcgtctcagccgctgggtgggggaggc
gggagagagatggaggtgggggggggaggaggaaggaggagaagaggaagtgacgctgcg
ctacgagagagacctggtccacaaactgaagctgctcagacacgagctgtcgctgcagca
accacaggctggacactgtcgcatagaggtctcacgagacgagatctttga
DBGET
integrated database retrieval system
