Salmo trutta (river trout): 115189003
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Entry
115189003 CDS
T08542
Name
(RefSeq) iroquois-class homeodomain protein irx-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115189003
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115189003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
115189003
NCBI-ProteinID:
XP_029603677
Ensembl:
ENSSTUG00000025180
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGVDRPGVLTPSSRGGSAEIAGNQSAAAAAVTSVLGMYANPY
TAHNYSAFLPYSSADLALFSQMGSQYELKDSPGVHPGSFTAHTSPAFYPYGQFQYGDPAR
PKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
VTWGARSKDDEDGNIFGSDNEGDAEKNDDEEEIDLESIDIDKIDDNDGDQSNEDEDDKPD
GRHRELDSLEKRRAFALQHDAFDKSKNSISSGKEELSDRNSNTIVVSPDRQGSFQLPVNT
KPKIWSLAETATSPDSSVKSNSPSGLTGHTPSQMQHPAFLPSHGLYTCQIGKFHNWTNGA
FLGQNSLLNVRSFLGVNQHQHHNVHLQTQQQQQQHQASVLVSTGASPQLSPKHIDRENVV
RSASPPTQPLKSSFRPLHDG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagttgggctaccctcagtatttaagtgcctcccaagcggtgtacggc
gtggatcggccgggggtcctgactccgtcgtcccggggagggagcgctgagatagcgggt
aaccagtcggctgctgccgctgcagtcacctcggtgttgggcatgtacgcaaacccttac
actgcacacaactacagcgcattcctgccttacagcagcgcagacttggctcttttctct
caaatgggctcccagtacgagctgaaggacagtcctggcgtccacccaggcagcttcacg
gcccacacctcgccagctttctacccatacggtcagttccagtacggggacccggccagg
cccaagaacgccacccgggagagtaccagcacgctgaaggcctggctcaatgagcacagg
aagaacccttaccccactaagggagagaagatcatgttagccatcattactaagatgacc
ctgacgcaggtgtccacctggttcgccaacgccaggaggaggttgaagaaggagaacaag
gtgacttggggggccaggagtaaagacgacgaggatggaaacatcttcggctccgacaat
gaaggagacgcggagaagaacgacgacgaagaggagatcgatctagaaagcatcgatata
gacaagatagacgataacgatggagatcagagcaatgaagatgaggatgataaaccggac
ggtagacaccgagaactggacagcctggagaaacggcgagccttcgccctgcaacacgac
gccttcgacaaatctaagaactccatttcctccgggaaggaagaactttctgatagaaac
agcaacaccatagttgtgtccccggacagacagggaagttttcagctcccagtgaacact
aagcctaagatctggtcgttagctgagacggctaccagtcctgatagttctgtcaagtcc
aactctccctccggtcttaccggtcacaccccgtctcagatgcagcacccggccttcctg
ccctctcacggactatatacctgtcagataggcaagtttcataactggaccaacggagct
ttcctggggcagaactctctgctcaatgtccggtcgtttctaggtgttaatcagcaccag
catcataacgttcacttacagacccaacaacaacagcagcagcaccaggcctcggtgttg
gtgtcgactggagcctcgccacaactcagccccaagcacatagaccgtgaaaacgttgta
agaagtgcctctcctccaacgcaacctctgaagtcctcattcagaccccttcacgatggg
taa
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