Salmo trutta (river trout): 115189767
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Entry
115189767 CDS
T08542
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115189767
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Protocadherins
115189767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Sde0182_C
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
115189767
NCBI-ProteinID:
XP_029604150
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MYLSVLFLLLLWAQALALKNLNYSVNEEQGPGTVIGNIAKDAKLGLGQGGQGKKSNFRVL
ENSAPHLIDVDPESGLLYTKQRIDRETLCRRNPKCQLSMEVFANDKEICMIKVDIVDIND
NSPTFPSDQIDIDISENAAPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLDVKSRG
DGTKFPELVIQRPLDREERNHHTLILTATDGGEYPRSGTMQINVKVIDSNDNSPVFEQPS
YVVEIPENSPPGKVLIDLNATDPDEGSNGQVVYSFSGYAPDRIRELFSIDSRTGVIKIQG
EIDYEENPIIEIDVQAKDLGPNPIPGHCKVTVNVIDRNDNWPSIGFVSVRQGAISEAAPP
GTVIALVRVTDKDSGRNGKLQCRVLGNVPFKLEENYDNFYTVVTDRPLDREQQDEYNVTI
VAKDNGTPPLNSTKSFTVKILDENDNVPRFTKAVYLLQVPENNIPGEYLGSVLALDPDLG
QNGTVFYSILNSNVSGGDVNTFVNVNAANGAIYAVRSFNYEQIKFFDFKVLAKDAGSPHL
ESNTTVRVSVLDVNDNIPVIVLPLLLNDTAEIHVPRNVGVGYIVTTVRAVDNDYGESGRL
TYEISDGNEERLFEMDPVTGEVRTTHPFWEDVSPMVELIIRVMDHGKPTLTTAARLIVKA
YSGPLPGGEPHINEEHHNWDTSLPLIVTLSIISMMLLAAMVTIAVKCKRENKEIRTYNCR
IAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPALATSPMYFDYQTRLP
LSSPRSEVMYLKPTANNLSVPQGQGQGVGCHTSFTGPVTNTTDTPSNRMSIIQVGTRYHS
TSFY
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttctgttttatttctccttctcctgtgggctcaagccctggctttgaaaaac
ttgaattattccgttaacgaagaacaaggaccggggacggttataggcaacatcgccaaa
gatgctaaactcggtctcgggcaagggggacaagggaaaaaatccaacttcagggttttg
gagaattcagcaccacatctcatcgacgtggaccctgagagcgggctcctctataccaag
caacgcatcgacagggaaacactgtgtcggcggaacccaaaatgccagctctccatggag
gtatttgctaacgacaaagagatctgcatgattaaagtagatatagtcgacattaacgac
aactcgcccacgttcccttccgatcagattgatattgacatttctgagaacgcggccccg
ggcacccgcttcccgctgactagcgctcatgacccggacgctggggagaacgggctaaaa
acctatcaaatcacacgagacgactacaatctgttttctctggatgtaaaatcccgcggg
gacggaactaaatttcccgagttagttatccaacggccgttagaccgggaggaacgtaac
catcacaccctgattctaacagctacggacggcggggagtatcccagatcaggaaccatg
cagattaacgtgaaagttattgactctaacgataacagccctgtgtttgaacagccctct
tatgttgtagaaatcccagaaaactccccacctgggaaagtattgatcgatttaaacgcc
acagacccggatgagggttccaatggtcaggtggtgtattcgttcagcggttatgccccg
gatagaatcagagaactcttctctatagattctagaactggagtcataaaaatccaagga
gagattgactatgaggagaaccctattatagaaatagatgttcaggctaaggatttaggc
cctaaccccatcccaggccactgtaaagtaactgtgaatgtgattgacaggaatgacaac
tggccctccatagggtttgtgtctgtgaggcagggggccattagtgaggcagccccacca
ggcacggtcatcgcactggtcagagtcacggataaagactctgggagaaacgggaagctc
cagtgtcgagtcttggggaacgttccgtttaaactagaggagaactatgacaacttctac
accgtggtgacggacaggcctctggacagagaacagcaggacgagtacaacgtcaccatc
gtcgccaaggacaacggcacgccgccccttaactccaccaagtccttcacggtgaagatt
ctagacgagaacgataatgttccgcgcttcaccaaagctgtgtatctgctccaggtgcca
gagaacaacatccccggggagtatctgggttccgtcctcgctctagacccggacctgggc
cagaacggaaccgtgttctactccatcctcaactccaacgtgagcggaggagacgtcaac
accttcgtgaatgtcaacgcggccaacggggcaatctacgccgtgaggtcattcaactac
gaacaaatcaaattctttgattttaaggtgttagcgaaggatgctgggtctccccacctg
gagagcaacaccacggtcagggtcagcgtcttagacgttaacgacaatatccccgtcatc
gttctcccgctgctcctgaacgacacggcagagatccacgtgccacggaacgtcggcgtc
ggttacatcgtcaccacggtgagggcggtcgacaacgattacggcgagagcgggcggttg
acctacgagatctctgacggtaacgaggagcgtctgttcgagatggacccggtgacgggc
gaggtgcggaccactcaccccttctgggaggacgtcagccccatggtggagctgatcatc
agggtgatggaccacgggaagcccacccttaccaccgccgcacgcctcatcgtcaaggcc
tacagcgggccgctgccgggcggcgagccccacatcaacgaagagcatcacaactgggac
acctcgctccctctcatcgtcaccttatccatcatctccatgatgctgctggctgccatg
gtaaccatcgccgtgaagtgcaaacgggagaacaaggagatcaggacttacaactgccgc
atcgcggagtactctcacccgcagctgggcaaaggcaagaagaagaagatcaacaagaat
gacatcatgctagttcagagcgaggtggaggaacgggacgccatgaacgtcatgaacgtg
gtgagctcaccagcgctcgccacctcccccatgtatttcgattaccagacgcggctgccg
ctgagctcgcccaggtcggaggtcatgtacctcaagcccacggccaacaacctgtcggtg
ccccagggacagggacagggcgtcggctgtcacacttccttcactggcccggtgactaac
accacagatacccccagtaacaggatgtccattatacaggtaggaacaagataccattca
actagcttttattga
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