Salmo trutta (river trout): 115190294 Help Entry 115190294         CDS       T08542                                  Symbol fdft1 Name (RefSeq) squalene synthase isoform X1   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism stru  Salmo trutta (river trout) Pathway stru00100   Steroid biosynthesis stru01100   Metabolic pathways Module stru_M00101   Cholesterol biosynthesis, FPP => cholesterol Brite KEGG Orthology (KO) [BR:stru00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     115190294 (fdft1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:stru01006]     115190294 (fdft1) Enzymes [BR:stru01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      115190294 (fdft1) Prenyltransferases [BR:stru01006]  Terpene biosynthesis   Squalene/phytoene synthase    115190294 (fdft1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SQS_PSY Octopine_DH GBP_C Motif Other DBs NCBI-GeneID:  115190294 NCBI-ProteinID:  XP_029604590 Ensembl:  ENSSTUG00000000941 LinkDB All DBs Position 1:complement(23180006..23192908) Genome browser AA seq 458 aa AA seqDB search MAGACCKCPVSLTVFKRSLCVTPRSPGPASRSLLSGGRLGERGVQEGCWAARPSALRTVG SYRHPVFLCFSCQESMSASLRTCYLYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALD TVEDDMTIPLEKKVPMLNDFHTYLYQANWCFTESHEKDRQVLEDFPTISLEFRNLGQAYQ DVISDICHRMGVGMAEFLEKKVGSMKEWDQYCHYVAGLVGIGLSQLFSASQLEDPEVGKD TELANSMGLFLQKTNIIRDYLEDIQVARAFWPQEAWSQFACRLEDLAEPDQLTSALSCLN LLVTDALRHVPDVITYLARLRNQSVFNFCAIPQVMAIATLSACYNNPQVFQGVVKIRKGQ AVTLMMQATNMGAVQSIMAQYSQEMLQRVSLTDPSRDKTLFILGVIQERTLSQATLASRT AHLSPMYLSAAMILAALSWQYLSTTAGQPPGTADMQGH NT seq 1377 nt NT seq  +upstreamnt  +downstreamnt atggccggagcttgctgcaagtgtccggtttctctcacggtgttcaagcgctctctctgc gtcaccccgcggagccctggacccgcttcacggtcccttctctccgggggacggctgggc gagaggggcgtgcaggagggatgttgggccgcccgccccagcgctttgcggacagtaggc tcttaccgacaccccgtgtttctctgtttctcttgccaggaatccatgagtgcgagcctg cggacatgctacctctatctgaaccagaccagtcgcagtttcgccgctgttatccaggcg ctagacggagagttacggcatgcggtgtgtatcttctacctggtcctacgggcccttgac acggtagaagatgatatgaccatccccctggagaagaaggtgcccatgctgaatgacttc cacacgtacctttaccaggccaactggtgcttcactgagagccacgagaaggacaggcag gtcctggaggacttccccacgatttccttggagttcaggaacctgggtcaggcataccag gatgtgatctcggatatctgccaccgcatgggagttggaatggctgagtttctggagaag aaagtgggctccatgaaggagtgggaccagtactgtcactatgtggcagggctggtgggt ataggcctgtcccagctgttctctgcctcccagctggaggacccagaggtgggcaaagac acagagctagccaactccatgggcctgttcctccagaagaccaacatcatcagagactac ctggaggatatacaggtggcgagggccttctggccacaagaggcatggagtcagtttgcg tgtcgtctggaggacctggcagagcctgaccagctgacctcagccctgtcctgtctcaac ctgctggtgacagacgccctgcgccacgtccctgatgtcatcacctatctggcacgccta cgcaaccagagcgtcttcaacttctgcgccataccacaggtgatggcgatagcgaccctc tcagcctgttacaacaaccctcaggtattccagggcgtggtgaaaatcaggaagggtcag gccgtcaccctcatgatgcaagccaccaacatgggtgccgtgcaaagcatcatggcccaa tacagccaggagatgctacagagggtgtccttgacggatccatcccgggacaaaaccctg tttatcctgggtgtgatccaggagaggactctctcccaagccaccctggcctcccggact gcccacctctcccccatgtacctctccgctgccatgatcctcgccgccctcagctggcag tacctaagcactacagccggacaacctcccggcactgctgacatgcagggccattga

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