Salmo trutta (river trout): 115191622
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Entry
115191622 CDS
T08542
Name
(RefSeq) TBC1 domain family member 2A-like
KO
K20165
TBC1 domain family member 2A
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115191622
Membrane trafficking [BR:
stru04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115191622
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
TSC22
PH_alsin
PH_3
YabA
Motif
Other DBs
NCBI-GeneID:
115191622
NCBI-ProteinID:
XP_029605269
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All DBs
Position
4:23122941..23172170
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AA seq
904 aa
AA seq
DB search
MILYVYLWKCSFVFFDQKAGRDGMNDIAFRNKDGDSFPTEPRKQSPVVSAAATLCGYLDK
LSGPLKVWRSLWFIYEEKECQLVYYKCAQDMNPLGWIDLSNAILGDLPQADQGTFYIQTP
ERTFTLKAVNCESMIYWLKQLQLKRWHHGNISGKLGMVTSHHALRRYTTLSDVLLRHTPT
GIHKENLLRSRSSQELSHSLSWEELWDPFLPLKDIQAHPYFDQDKSPPKTNIEPSGPATQ
WVQEIEAPKKRQSSLSSEGSSSTPTDKTSSPQQEEPADTAHLQQEVLSLAGQVKAQKDLV
SLLQKALELAQQEKLTPAVESLRSECEWKSSNSQPWNQGECNTDHSYGLQVAPLLRHDCV
AESQDHLRLLAERNQAERELVLHLSQQVAESLADPQRSLVRGWTVLETQEQLRQEIRNLK
DNIEAYKTQNTYLNAEIYKLTKVWRQSTEQEKCLMIKCAHLEAKVFRMESRSLTVLFKLQ
DSRDLERHREAIKTLITDTLREGGRDILELNPVRSVVICVLCREYDEYGFRISTDIQRDD
MKLLAKLQALGIRSHDPPQQKKDGEEEGDSERLWGRWAQHFDGRRSDKAVASQKLKGLLR
KGVPHHYRRRVWRWIVWSRTQFLRERHPHWYQQICLRSQVASAHRVSRQIWLDLETTLRG
NRHFSFPAKHAVRQLHRILLAFSCHNPSVGYCQGLNRLAAMALLVLQSEEDSFWCLVAIV
ETIMPKDFYGKTLTASQVEQRVLKDFMAEKMPRLTAHFHCHGVDVSLVTSDWFLAAFVER
LTSDVLLRIWDAFLYEGTKVIFRYALALFKYTEEDILKIHHRVDIYQYLHFITRTITDSR
RLTTIAFSDMNPFPFRLLRQRRALHLQCVHVQLSELERVQRELGREQRQHKDREVGLVSS
ESSG
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgatactgtatgtttatctgtggaagtgttcatttgtcttctttgatcaaaaagcaggc
agagatggaatgaatgacattgcctttcgaaacaaagacggggacagttttcccactgag
cccagaaagcagagcccagtggtatctgctgctgccacattatgcgggtatctggacaag
ctgagcgggccactgaaggtctggaggtccctctggttcatatacgaggagaaggagtgt
cagctggtctactacaagtgtgcccaggatatgaatccactgggatggattgacctgtcc
aacgccatactgggagacctaccgcaggcagaccaggggaccttctacattcaaacacct
gagcgcaccttcaccctcaaggctgtgaattgcgagtctatgatatactggctgaagcag
ctccagttgaagaggtggcatcatgggaatatttctggaaagctgggaatggtcaccagt
caccatgcactacgacgatacaccacgctgagtgacgtcctcctcagacacactccgaca
ggaattcataaggaaaacttactccggagccgctcctcccaggagctcagccacagcctc
agctgggaggaactctgggacccattcctgccactcaaagacatccaggcccatccatat
tttgaccaggacaaatcccctccaaaaacaaatattgagccctctgggccagcaacacag
tgggtccaggagatagaggcaccaaagaaacgccagagctccctaagcagtgagggctcc
tcttctacccccacagacaagacctctagtccacagcaggaagagcctgcagacaccgcc
catcttcaacaggaagtgctcagtctggcaggccaggtcaaggcccagaaggatctagta
tccctgttgcagaaggccctagagttggcccagcaggagaaattgactcctgcagtagag
tccctgaggtcggagtgtgaatggaagagttccaactcacaaccatggaatcaaggcgag
tgcaacacagatcattcgtatggcctgcaggttgcgccactgctgcggcacgactgtgtg
gctgaatctcaggatcacctccggctactggctgagaggaaccaggctgagagagagttg
gtcctccatctgtcccaacaagtggctgagagtttggccgacccccagcgaagcctcgtc
cgcggttggactgtccttgaaacgcaggagcagctgagacaggagattaggaatcttaag
gacaacattgaggcctacaagactcagaatacttacttgaacgcagagatctacaagcta
accaaagtatggaggcagagtacagaacaagagaagtgcttgatgataaagtgtgcccat
ctggaggccaaggtgttccggatggagagcaggtctttgacagtcctcttcaagctacag
gacagcagagatttggagagacacagggaagccataaagaccctgatcacagacactctt
cgggagggcgggagggacattctggaactgaaccctgtcaggtctgtcgtcatttgtgtg
ttgtgtagggaatatgatgagtatgggttcagaatctccactgacatccaaagggatgat
atgaagctgctggccaaactgcaagcattagggattcgttcccacgatcccccacaacaa
aagaaggacggggaagaggagggggacagcgagcgtctttggggccgctgggcacagcac
tttgatggcagacgatcagacaaggcggtggcctctcagaagctgaaggggcttctgaga
aagggcgtgccgcaccactacaggcgccgtgtgtggcgctggatagtgtggagccgcacc
cagttcctgagagagcgccacccccactggtaccaacagatatgccttaggagccaggtt
gcgtcggcccaccgggtctcgcggcagatctggttggacctggagaccactctgaggggg
aaccgccacttctccttccccgcaaagcatgccgtccggcagctacaccgtatcctcctg
gccttttcttgtcataacccgtctgtcggctactgccagggcctcaacagattggctgca
atggccttgctagtgttgcaaagcgaggaagattctttctggtgtctggtggccattgtc
gagaccatcatgcctaaggacttctatggcaagactctaacagcatctcaggtggagcag
cgcgtgctcaaggacttcatggcagagaagatgccgagactaacagcccatttccactgt
cacggagtggacgtgtccctggtcacctccgactggttcctagctgcgtttgtggagagg
ctgaccagtgacgtcctgctcagaatttgggacgccttcctgtacgagggcaccaaggtg
atatttcgctatgcattggcgctcttcaaatacacagaagaggacattctgaagattcat
catcgtgtggatatctaccagtacctccatttcatcaccagaaccatcacagacagcagg
agactgacgaccattgcattcagcgacatgaacccgtttcctttcaggctgctccgtcag
agacgggccctgcaccttcagtgtgtgcatgtacagttgagtgagttagagcgtgtccag
agggagctgggtagagagcaacgccagcacaaggacagggaggttgggctcgtttccagc
gagagctctggataa
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