Salmo trutta (river trout): 115191730
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Entry
115191730 CDS
T08542
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04310
Wnt signaling pathway
stru04520
Adherens junction
stru04916
Melanogenesis
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115191730 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115191730 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
115191730 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115191730 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115191730 (lef1)
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
115191730 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115191730
NCBI-ProteinID:
XP_029605445
Ensembl:
ENSSTUG00000001973
LinkDB
All DBs
Position
4:complement(5708351..5755322)
Genome browser
AA seq
355 aa
AA seq
DB search
MPQLAGGGGGGDPELCATDEMIPFKDEGDQEQIFAELSHSEEDEGDLADIKSSLVNESET
SPNSNHDGTRQSQISQDSYHEKHRDHHDDGKHLDMYNKGHPYSGYPGYIMMTNMNNDSYM
NNGSLSPPMPRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGPHSGHHPQDVNPKQGQYH
SSCLSTGMQRHHPGPDMTNFYPLSPGGVGQITPPLGWFSHHMVPGPPGPHATGIPHPAIV
NPQVKHEPQHDNDLMHIFARKPQHQDQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAEC
TLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYVSII
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgccacaactcgcaggtggtggcggtggcggggaccctgagctttgtgccaccgacgaa
atgattccgttcaaggatgagggagaccaagaacaaatattcgcagaactcagtcactca
gaggaagacgagggagacttggcagatatcaagtcatctttagtaaatgagtcagagacg
agtccaaacagcaaccatgatggaactagacaatcccaaatatcccaagactcatatcat
gaaaaacacagagaccatcacgacgatgggaaacacctagacatgtacaacaaaggtcat
ccgtactctggatacccaggttacatcatgatgactaatatgaacaacgactcctacatg
aacaacggctccctgtcgccgcccatgcccagaacgtccaataaggttccggtggtgcag
ccgtcgcatgcggtccatccgctcacccccctcatcacatacagcgacgaacatttcgcc
cccggaccccactccggacaccacccccaggacgtcaaccccaaacaaggacagtaccac
tcatcctgtctctctacaggcatgcagcggcatcaccccgggccagacatgaccaacttc
taccccctctcccctggaggagtgggacagatcacgcccccactaggatggttctcccac
cacatggttccgggtccccccggcccccacgccacagggatcccccacccggccatcgtc
aacccccaggtcaaacacgagccccagcacgacaacgacctgatgcacatttttgccagg
aagcctcagcaccaggatcagaggaaggagcaggagcccaagagaccccacatcaagaag
ccgctgaatgccttcatgctgtacatgaaggagatgagggccaacgtggtggcagagtgc
acgctcaaggagagcgccgccatcaaccagatcctgggacggaggtggcatgccttatcc
agagaagagcaagctaagtattacgaattagcccgcaaggaacggcagctccacatgcag
ctctacccaggctggtctgccagagataattatgtaagtatcatatag
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