Salmo trutta (river trout): 115191792
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Entry
115191792 CDS
T08542
Symbol
lsm6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
stru
Salmo trutta (river trout)
Pathway
stru03018
RNA degradation
stru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115191792 (lsm6)
09123 Folding, sorting and degradation
03018 RNA degradation
115191792 (lsm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115191792 (lsm6)
03041 Spliceosome [BR:
stru03041
]
115191792 (lsm6)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115191792 (lsm6)
mRNA degradation factors
5'-3' decay
Lsm complex
115191792 (lsm6)
Spliceosome [BR:
stru03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115191792 (lsm6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
115191792
NCBI-ProteinID:
XP_029605579
UniProt:
A0A673VSD4
LinkDB
All DBs
Position
4:8049408..8051332
Genome browser
AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAVEQTEEYVNGQLKNKY
GDAFLRGNNVLYISTQKRKM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcagaaagcagacccccagtgactttctgaagcagatcattggcagaccagtt
gtggtcaagctcaactctggagtggattacagaggtgtcctagcctgtctggatggctat
atgaacattgcagtggagcagacagaggagtatgtcaacgggcagctgaagaacaagtac
ggcgacgccttcctgagaggaaacaacgtgttatacatcagcacccagaagaggaagatg
tga
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integrated database retrieval system
