Salmo trutta (river trout): 115191837
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Entry
115191837 CDS
T08542
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru02010
ABC transporters
stru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115191837
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115191837
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stru02000
]
115191837
Transporters [BR:
stru02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115191837
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Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
115191837
NCBI-ProteinID:
XP_029605652
Ensembl:
ENSSTUG00000029408
LinkDB
All DBs
Position
4:14201680..14242591
Genome browser
AA seq
2283 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTLQLVIEIIWPLFIFFILISVRMHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRHPTPGETPGLVGNFNDSIISRLFIDAKKILLYSQNDK
SFEGYKVLVRALRKLQSNTAGFKLKDFLRDKETLSSFLHRNASLSHHAVQQIVEADLNLE
KVLIGGFGVHLRDMCNTTSLEEFVTISDKNVSRLTQDIICKASPDWLNKAQDHFLSNLDF
LKPIRKDVKSDPEVVQKVSSATDGLLESLGALAVELASMKSWKEMRNEIHYLTVNATGSP
SHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGGNGSDNEPVSAYDNTSTPY
CNSMMRSLEASPISRMIWRALKPLLMGKILYTPDTPATQRIIHEMNKTFQELGILRDLGG
MWEEMRPKVWTFMESSEEMDLVRTLLQNNASARFFNDRLAGTEWKAEDVSRFLTKAAEDK
RPAGSAYTWREVFNETDDAIKTISRFMECVNLDKLEPVANEERLVNKSMGLLDNQKFWAG
IVFPDIARSNSSDLPGNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFS
YLQDVIEQGIVRAVTGSKEKTGVYIQQMPYPCYVDDMFLRVMSRSMPLFMTLAWMYSVAL
IIKGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISASLLVVILKMGNLLPYSD
PCVVFLFLASFAVVTIMQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFG
AKVIVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPLEEDSYSLTTSICLMLFDSFL
YGVMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKQGKNIQERKEGNAEAVCIEEEPSHI
EPGVYIKNLVKVYSHGNKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSG
TAYILGKDIRSELSAIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKAEMEQI
VNDIGLPHKRQCRSNTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLL
KYRAGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDLD
LTLSSCRNSSSSSSVSYSKKVGLPQPQPQALTVLKGDSVSESSSDAGLGSEPESEATTID
VTMISNVIFKHVPAARLVEDLGHELTYVLPYKAAKGGAFVELFHEIDDRLSDLGISSYGI
SDTTLEEIFLKVAEDSGVDAAELPNSDGAIPARRHRRHAFGDHQSCLKPFTEDDAFDFND
SEGDPESRETDWLGGSDGKGSYQVKGWRLIRQQFVALIWKRFLYARRSRKGFFAQIVLPA
VFVCIALVFSLIVPPFGKYPSLELEPGMYEEQFTFISNDAPGDADTNKLLGALTNYDGFG
SRCNSLHIPCNTLDDEWAVPEVPESVRDIFMNGNWSMENPSPLCECSCEGRKKMLPECPA
GAGGLPPPQVKISDKGTLQNLTGRNISDYLVKTYAQIIGKSLKNKISVNEFRYGGFSLGA
RNTQHLPPGDDIDQAISEIRQRFHLERGTAADRFLASLSSFIQGLDTKNNVKIWFNNKGW
HSIGSFLNVMNNGILRASLPAGQDSSKYGIRAFNHPLNLTKEQLSQVALMTTSVDVLVSI
CVIFAMSFVPASFVVFLIQERVNKAKHMQFISGVHPFLYWLSNFIWDMCNYIVPATLVII
IFICFQQDAYVSSTNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGI
NGSVSTFVLELFGSNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENR
FRSPLAWDMVGKNLFAMAVQGVVFFTITVLIQYRFCIKARSLRTDQKPIGEEDEDVARER
QRILGGGGQSDILELKQLTKVYNRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKML
TGDSIVTSGEAYLAGKSVLTEINEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEK
EVCEVAEWGIRKLGLIKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKA
RRALWNCILSIVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGY
TIILRVAGPDPDLRPVMEFIEKELPGSTLKEKHRNMLQYQLSSSKTSLARIFSILAKNKE
WLHIEDYSVSQTTLDQVFVNFAKDQSDEDHLKDISVHKRDAVAVDITQLKSFLTDEKARE
SCV
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctctactcaactgggcttactgctgtggaagaacttcacctacagacggaga
cagacactccagctagttatcgagataatatggccgctcttcatcttcttcatcctcata
tctgtgaggatgcattacccgccctacgagcaacatgagtgccatttccctaacaaggcc
atgccctcggcgggcaccttgccctgggtacaagggatcatctgtaacgccaacaaccct
tgcttccgccaccccacaccaggagagaccccagggctggtgggcaacttcaacgattct
ataatctcccgtctgttcatcgatgccaagaagatcctcctctacagccagaatgacaag
agcttcgagggctacaaagttctggtgcgggctctgaggaaactacagagcaacacggca
ggtttcaagctgaaggactttctccgcgataaggagaccttgtcgtcgttcctgcatcgc
aacgcctccctatcccatcatgccgtccagcagattgtagaggctgacctcaacctagag
aaggtcctgattggaggtttcggcgtccatcttagagacatgtgtaacaccacttctctg
gaggagtttgtgaccatctccgacaagaatgtgtcacggctcactcaagacatcatctgc
aaggcctcccctgattggctgaacaaggcccaggaccacttcctgtccaacctggacttc
ctaaaacccatacggaaggacgtgaagtccgaccctgaggtcgtccagaaggtatcctcg
gcaaccgacggtctgctagagagcttgggagcgctggctgtagagctggccagtatgaag
agttggaaggagatgcgtaacgagatccattacctgacggtcaacgccacaggctccccc
agccacatgtaccaggccgtgtcccgtatcgtctgtggccaccccgagggcggcggactg
aagatcaagtccctcaactggtacgaggacaacaactacaaggccctgttcggtaaccac
ggcggcaacggcagcgacaacgaacccgtgtccgcctacgacaacacctcgactccgtac
tgtaacagcatgatgaggagtctagaagctagccccatctccaggatgatctggagggcc
ctgaagcctctcctcatgggaaagatcctgtacacccccgacactcccgccacacagagg
atcatacacgagatgaacaagacgttccaggagcttggtatcctgagggacctgggtggg
atgtgggaggagatgaggcctaaagtctggaccttcatggagagcagtgaggagatggac
ctggttcggacgctgcttcagaacaacgccagcgcccgcttcttcaacgaccgtctggct
ggcaccgagtggaaggcggaggacgtgtcccgcttcctgaccaaggctgcggaggacaaa
cgtcccgccggctcggcctacacctggagagaggtgttcaacgagaccgacgacgctatc
aagaccatctcccgctttatggagtgtgtgaacctggataaactagagccagtggccaat
gaggaaagactggtcaacaaatccatgggtctcctagacaatcagaagttctgggctggg
atagtgttcccggacatcgcccgtagcaacagttctgacctgccgggtaacgtcaactac
aagatccgcatggacatcgacaacgtggagcgcaccaacaagatcaaggacggttactgg
gaccctggtccccgggccgacccctttgaggacctgcgctacatctggggtggtttctcc
tacctgcaggacgttatagaacagggcatcgtcagggcggtgacgggcagcaaggagaag
actggagtctacatccaacagatgccttacccctgctacgtagatgatatgttcctgcgg
gtgatgagtcgctccatgcccctcttcatgaccctggcctggatgtactctgtggccctc
atcatcaagggcgtggtctatgagaaggaggcgcggctcaaagagaccatgaggatcatg
ggattggacaacggcatcctgtggctcagctggttcatcagcagcctcatccccctgctc
atctccgcctcgctgctggtggtcatactcaagatggggaacctgcttccctacagcgac
ccttgcgtggtcttcctgttcctggcttcctttgctgtggtaaccatcatgcagtgcttc
ctcatcagtaccatcttctcccgtgccaacctggcggcggcctgcggaggaatcatctac
ttcaccctctacctgccctatgtcctctgtgtggcctggcaggactacgtgggcttcggg
gctaaagtcattgtgagcctgttgtccccggtggcgtttgggttcggctgtgagtacttt
gccctgtttgaggagcagggagtgggaatccagtggtccaacctgttgtccagccccttg
gaggaggacagctactccctcaccacctccatctgtctcatgctgtttgactccttcctc
tacggggtcatgacctggtacatcgaggctgtcttccctggccagtatgggatccccaga
ccctggtacttccccttcaccaagtcctactggtgtggagagaaacaagggaagaatata
caagaaagaaaggaaggaaacgcagaagctgtgtgcatcgaagaggagccgtctcacatc
gagcctggtgtttacatcaagaacctagtgaaagtatatagccatggcaacaagctggct
gtagacgggttgaccctgggtttctacgaggggcagatcacctccttcctggggcacaac
ggagccggcaagaccaccaccatgtccatcctgacgggtctgttcccgcccacctctggc
accgcctacatcctgggcaaggacatccgctcggagctcagcgccatccgacagaacctg
ggcgtctgccctcagcacaacgttctcttcagcatgctgacggtggaggagcacatctgg
ttctatgcccgtctgaagggtctgtctgaggagaaggtgaaggctgagatggagcagatc
gtcaacgacattggcctgcctcacaaacgccagtgtcgtagcaacacgctgtccgggggc
atgcagaggaaactgtcagtggcgttggcgttcgttggagggtcaaaggtcgtgatcctg
gatgaacccactgctggagtcgacccttacgcacgccggggcatttgggacctgcttctg
aagtatcgtgcaggccgcaccatcatcctctcaactcaccacatggatgaggcggacatc
ttgggcgaccgcatcgccatcatctcccacggcaagctgtgctgcgtgggctcctccctg
ttcctgaagacccagctggggacgggctactacctgaccctggtgaagagagacttggac
ctgaccctcagctcctgtaggaactcctccagcagcagctctgtctcctacagcaagaag
gtgggcctccctcagccgcaacctcaggccctcacagtcctaaagggggacagtgtttct
gagagcagctctgatgctggactgggtagtgaacctgagagtgaagccacaactattgac
gtaaccatgatctccaatgtgatcttcaagcacgtccccgctgccaggctggttgaggac
ctgggccacgaactcacctacgttctgccctacaaggcggccaaaggtggagccttcgtg
gaactcttccacgagatcgacgaccgcctgtctgacctcggcatctccagctacggcatc
tcagacaccaccctggaagagattttcctgaaggtagcagaggacagtggagtggacgct
gctgaacttcccaactctgatggcgccatcccggctcgcaggcaccgcagacacgcgttc
ggagaccaccagagctgtctgaaacccttcaccgaggatgacgctttcgacttcaacgac
tcagaaggtgacccagaatctcgtgagacggactggctgggaggctcggatggtaaaggc
tcgtaccaggtcaaaggctggcgtctgattagacagcagtttgtggcgttgatatggaaa
cgcttcctgtatgcccggcgctccaggaaaggcttcttcgctcagatcgttcttcctgct
gtgtttgtgtgcatcgccctcgtcttcagtctcatcgtccctccgtttggaaagtatccc
agcctggagctggagcccggcatgtatgaagaacagttcaccttcatcagcaacgacgcc
cctggggatgcagacactaacaagctgttgggtgccctgacaaactacgacggctttggt
tcgcgctgcaactcacttcatattccttgcaacacgttggatgatgagtgggccgttcct
gaggtaccggagagtgtgagggacatctttatgaatggcaactggagtatggaaaacccc
tctcctctgtgtgagtgcagctgtgaaggacgcaagaagatgcttcctgaatgcccagcg
ggagctggtggtctgcctcctccacaggtgaaaatcagtgacaaaggtaccctgcaaaat
ctgactggcagaaatatctcagattacctggtcaaaacctatgctcagattatcgggaaa
agtttgaagaacaaaatctcggtcaatgaattcagatatggtggattctcattgggcgct
aggaacactcagcacctcccaccaggtgatgatattgatcaggccatctctgagatcaga
caacgcttccacctggaaagagggactgctgctgaccgtttccttgccagcttatccagt
tttatccagggactggacactaagaacaatgtcaagatctggttcaacaacaaggggtgg
cacagcatcgggtctttcctgaacgtgatgaacaacggaatcctgcgcgccagcctgccc
gccggccaggactccagcaagtatggcatccgtgctttcaaccacccactcaacctcacc
aaggagcaactgtcccaggtcgcactgatgaccacctctgtggacgtgctggtgtccatc
tgcgtgatcttcgccatgtctttcgtcccggccagcttcgtagtcttcctcattcaggag
agagtcaacaaggccaagcacatgcagttcatcagtggtgtgcatcccttcctctattgg
ctgtccaacttcatctgggacatgtgtaactacatcgtccctgctactctggtcatcatc
atcttcatctgcttccaacaagacgcctacgtctcctccaccaacctgcctgtactggcc
ctgctgctgctgctctatgggtggtccatcacgcccctgatgtacccggcgtccttcttc
ttcaagatccccagcacggcctacgtggtgctcacctccgtcaacatcctcatcggcatc
aacggcagcgtctccaccttcgtcctcgagctcttcggcagcaacgagatcggagggatc
aacgacatcctgaagaacgtgttcctgatcttccctcacttctgtctgggccgaggcctc
atcgacatggtgaagaaccaggccatggccgacgctctggagaggtttggtgagaaccgg
ttccgttcccctctggcgtgggacatggtgggcaagaacctgttcgccatggctgtgcag
ggcgtggtgttcttcactatcaccgtgctcatccaataccgcttctgtatcaaggccaga
tctttgcgcaccgaccagaaacctatcggtgaggaggatgaagacgtggccagagagagg
caaaggattctgggaggagggggacagtctgacattctggaactcaagcagctgaccaag
gtgtacaatagaaaacagaaaccagcagtggatcgtctttgtgtgggaattcctcctgga
gagtgttttggtctgcttggagtcaacggagcaggaaagacgagcaccttcaagatgctg
actggagactcaatagtcacgagtggagaagcttacctggcgggaaagagtgtgttgacg
gagataaacgaggtgcaccagaacatgggctactgccctcagtttgatgctatcaacgac
ctgctgactggcagggagcaccttgagttctacgccatcctgaggggggttcccgagaag
gaagtgtgtgaggtggcagagtggggcatccgtaaactaggcctgatcaagtatgtggac
aaggcagcagggagctacagtggagggaacatgaggaaactctccacggccatggcactg
atcggtggtcccccggtggtcttcctggacgagcccaccactggtatggaccccaaggcc
aggcgggctctgtggaactgcattctcagtatcgtcaaggaggggcgatcggtggttctc
acctcgcacagtatggaggagtgtgaggccctgtgtacgcggatggccatcatggtcaat
gggaggttccgctgcctgggcagcgtacagcacttaaagaacagatttggggatggctac
accatcatcctccgggtggcaggaccagacccggacctgaggccggtgatggagtttatt
gagaaggagcttccaggcagcactctgaaggagaagcacaggaacatgctgcagtatcag
ctgtcctcctccaaaacctccctggcacgcatcttcagcatcctggccaagaacaaggag
tggctgcacattgaggactactccgtttcccagacaacactagaccaagtgtttgtcaat
ttcgccaaggaccaaagtgacgaggaccacttaaaagacatttccgtgcacaagagagac
gcggtggcagtggacattactcagctcaagtctttcctcacagacgagaaggccagggag
agctgtgtgtga
DBGET
integrated database retrieval system
