Salmo trutta (river trout): 115191918
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Entry
115191918 CDS
T08542
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115191918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115191918
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115191918
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
HECT type E3
115191918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
115191918
NCBI-ProteinID:
XP_029605795
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All DBs
Position
4:complement(16748001..16783627)
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AA seq
1007 aa
AA seq
DB search
MISWGEDSSNGFGLDTTKTDISCVNLIHLKSKIQGLSAGNSVVAFIRNNGRQVSVARIQE
DQDARRFTGKLKSVKCKETIRALSCGDSHVVLLSEEGRVLCLDKANILRPLDNLCNRKVT
QVACGDQHSISLTQDGQVFTWGQNTSGQLGLGWSEPKAVSPKHLKSLSGIPLVQITAGGD
HSFALSLSGAVFGWGKNTAGQLGLGDTTDRHAPAPVDCLNLKKTVLISCGGEHTAVLTKG
GVVFTFGSGRYGQLGHNSLRDELRPRVVGQLWGSKVTQIACGKHHTLAFVGPSNKIYSFG
CGEQGQLGNAVKIDQSVPLPVQLPDQIDDQKIEHIFAGGNHSFALCTLGQESEERSNNLR
SSVGKVTQQAIDKEIIYKWISECDSKSWKKGQKEITKMFSSASCLNGSFLDKSCDKHYQT
SPKQSGLDFSLVQGAFRKLSKKAKVLTEVEAVVQHTLLPSLNEEPIGVEGLRVYLVLPEL
LRVLHKQHRRTDLTEAVAAAILRLHPDKLQVLGDCWSSLKPSVMTKHIGVWKKALSVILR
SEHILRTRDPGIKHLLQVLGHLHRANQKSVETQTVPDSTFCMEEVHFNPIFLEEDVKLWR
LWSKQDVDQTPAIFCRYPFLMNLQSKINVFNINAALTMNPPNNLQRTGMWPFDMFPVAAP
APFFELRLRRASLIEDTFHQLSVAYHSTFKRSLVVYLDEDAKLTDVYKRDFFLHLFDKLL
VPESGMFMYNDTNTLAWFPAKPRVEEKRYFLFGVLCGMALYNNNMVHLPFPMAFFKKLVN
IKPSLEDLREFSPIEAGSLQYILDYPDDDVENMDMTFSVMWGDVAVELDPKETGKLVTSA
NKKEFVDTYVNYVFNQSVEVVFEEFRKGFFKVCDMDVVEFFQPEELRGVMVGKENFDWET
LKQNTVYEGEYHAGHPNIVTFWEVFEELTEDQKKAFLLFLTGCDRVPILGMNQIRMSVQT
LLNSSQQHFPEALTCHSLLQLPIYPSKETLQSRLIEAVGHNRGFWNE
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgatttcatggggagaggatagtagtaatggctttggtttagatacgacaaaaacggat
attagttgcgttaatttgatacaccttaaatctaaaattcagggtctgtccgcaggtaac
agtgtggtcgcgtttatcagaaataatgggagacaagtgtctgtcgcacggattcaagag
gaccaagatgcgagaagattcacagggaaactgaagagtgtgaaatgtaaggagacgatt
cgggctctgagttgtggagattctcatgttgttttactgtctgaagagggccgggttctc
tgcttggacaaagccaatattctcagaccattggataacctatgtaaccgaaaggtaact
caggttgcatgtggagaccagcattcaatttcactaacacaggatggtcaggtgttcaca
tggggtcagaacaccagcggtcagctgggtttggggtggagcgagcccaaagccgtgtcc
cccaagcacctgaagtctctatcagggatccctctggttcagatcactgcagggggagac
cacagcttcgctctgtccctttctggagctgtgtttgggtggggcaagaacaccgccggg
cagctgggactaggggacacaacagacagacatgccccagctcctgttgattgcctgaat
ctgaagaagactgttttgatttcatgtggaggagaacatactgccgttctgacaaaggga
ggtgtggtgtttacatttggctcaggccgctatggacagcttggacacaactctctccga
gatgaactacgacctcgagtggtggggcaactctggggttcaaaggtgacccagatagcc
tgtggaaaacaccacacattagcatttgtggggccctccaataagatctactcatttggg
tgcggagagcaagggcagctgggaaatgcagtaaagattgatcagtctgtgccccttcca
gtacaactgccagaccagattgatgaccagaaaattgaacacatttttgctgggggaaac
cattcctttgcattgtgcactcttggtcaggagtctgaagaaaggtctaacaatctcagg
tcaagtgtgggcaaagtgacacaacaagctatagataaagaaatcatttacaaatggatc
tcggaatgtgactcaaagtcttggaaaaaaggacagaaggaaatcacaaaaatgttttct
tctgcatcatgtttaaatgggagctttcttgataaaagttgtgacaaacattaccaaacc
tcaccaaaacagtctggcctggatttttcactcgtccaaggcgcattccggaagctgtcg
aaaaaggccaaagttttgactgaggttgaagctgttgtccagcacacactgcttccctcc
ctgaatgaggagcccattggagtggagggcttgagggtctacctggttctccctgagctc
ctgagggtccttcacaaacagcacagaaggacagatctcaccgaagccgttgctgctgct
atcctcagactgcaccccgacaagctgcaggtcctcggtgactgctggtcctcattgaag
ccgtctgtcatgaccaagcacattggggtgtggaagaaggccctgtcggtgattctgagg
agtgaacatattctacgcactcgtgaccctgggatcaaacacctgctccaggtcctcggc
catctccacagagcaaaccagaaatctgtagaaacccagacagttccagacagtaccttt
tgtatggaggaggttcacttcaatcccatatttctagaggaggatgtaaagctttggcgt
ttatggtcaaagcaggatgtggatcagacacctgccatcttttgtcgttacccattcttg
atgaatctgcagagcaagataaacgtttttaacatcaacgctgcactcacaatgaatccc
cctaacaatctccaaagaactggcatgtggccttttgacatgttccccgtggcggctcct
gctccgttctttgagctgaggctgaggagagcgtcactcatcgaagacactttccatcaa
ctgagtgtagcatatcacagtaccttcaagaggtcccttgtggtgtatttggacgaggat
gcgaagctgacagacgtctacaaaagggacttcttccttcatttgtttgataagctgttg
gttcccgagtctgggatgttcatgtacaacgacaccaacacgctggcctggttccctgca
aagcctagagtggaggagaagcgttatttcctgtttggggttctgtgtgggatggccctg
tacaacaacaacatggtgcacctccctttccccatggccttcttcaagaagctggtgaac
atcaagccctctttagaggacctgagagagtttagccccattgaagcagggagtttgcag
tacatcttggattaccctgatgatgatgttgaaaacatggacatgactttctcagtgatg
tggggtgacgtagcggtggaacttgatcctaaagaaactggaaaactcgtcacaagtgct
aacaagaaggagtttgttgacacctatgtgaactacgtcttcaaccagtcagtagaggtg
gtgtttgaagagttcaggaaaggcttcttcaaggtgtgtgacatggacgtggtggagttc
ttccagccagaggaactgaggggagtgatggtggggaaggagaacttcgactgggaaacg
ctgaaacagaacactgtgtatgaaggagagtaccatgctgggcatcccaacatcgtcaca
ttctgggaggtgtttgaggaactgacagaggatcaaaagaaagcgttcctgttgttcctg
actggctgtgatcgtgtgcccatcctgggtatgaaccagatcaggatgagtgtccaaacc
cttctcaactcctcccaacagcatttcccagaggcgctgacctgtcactctctgttgcag
ctgcccatctacccctccaaagagacactacagagcaggcttatagaggctgttggccac
aacagaggcttctggaatgaataa
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