Salmo trutta (river trout): 115192009 Help Entry 115192009         CDS       T08542                                  Name (RefSeq) protein PAT1 homolog 1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism stru  Salmo trutta (river trout) Pathway stru03018   RNA degradation Brite KEGG Orthology (KO) [BR:stru00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     115192009  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:stru03019]     115192009 Messenger RNA biogenesis [BR:stru03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      115192009   mRNA degradation factors    5'-3' decay     Decapping complex      115192009 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 LRR_RI_capping Motif Other DBs NCBI-GeneID:  115192009 NCBI-ProteinID:  XP_029605953 UniProt:  A0A673YFG7 LinkDB All DBs Position 4:19031006..19057256 Genome browser AA seq 808 aa AA seqDB search MFRFQSLDEDCTLEKEEGLVEEEDEIDQFNDDTFGDGAIDDDWQEEHKRLAELEERKNDG LGGLGLGGLGMGGMGGGDSSTVQLPPPASRVPHPSSLPLPHHSLSSMPPPGLEERGGGDL AESLAMLLLGADPAIASVGGPAGPGDRSTGLPPPPSMPQQHHHPSQLPSHHQLTPSGLPP GPLHPSLLSYQQHQHLLRRGGAPMPQMNSHNIWENNMGFGPVSVTPGLITQMEDSPLMSI IKEVGLPNRPPPVMSEDGRDLSERAPPPRSSSPVIGSPPVRAVPIGTPPKQPMSHAMNHH HQQQIHHPTTVHVRAPVHHQHRYPPSFPERISPNTLLNMANSPLCRPPFPAGVGPVLSQI QRAQMLNSQVAGFPRGCQGPPLLPGGGGFRPFFGQPPPHRMGPHHNHVPCPIIRHNTTHL HPQHRRMLTQRMQSRGGERGGRVGDWRSRDPYSNLMTQREKEWVAKIQMMQLQSTDPYLD DYYYQNYFEKMEKRQERDRDGVRKEHTTKLITPQVAKLEHTYRPVQFAGSLGKLTVSSVN NPRKMIDTVVTSRTDDEEKREKQVWNKRRQILYTVEKMYSLLLEVQDFEKRFMQTPEEQR EALLEQHKTHTLQLYASLKEKEWDDRVSDEQCLLIMSVRKGKRLISRLIPFLPPLQAATV VMGIARNLPALAKKDKQDQALCWLVEPVAVVISSLSSAALTDLLQELQGNEGQLSKVLQN KFGVTLLYLILSEGERMQSSDLNCQLMDDNRWTELVFSVTRELLNVPPSSLSPPLFTPPN LLSLFSRYVDRQRLELLQEKLQISALSR NT seq 2427 nt NT seq  +upstreamnt  +downstreamnt atgttccgttttcagtcccttgatgaagattgtaccctggagaaggaggaggggctggta gaagaagaagatgagattgaccagtttaatgacgacaccttcggagatggagccatcgat gatgactggcaggaggagcacaagcggctcgcagagctcgaagagcgaaagaacgacgga ctcggaggtttaggtctagggggactagggatggggggaatgggaggaggagactcctcc accgttcaactccctcctcctgccagtcgcgtcccccacccgtcatccctccccctacca catcactccctctcttcgatgccccctccgggcctggaggagagggggggaggcgaccta gctgagtccctagccatgttgcttcttggggcagacccggccatcgccagcgtgggtggt ccagctgggcctggtgaccggtccactggtctccctcctcccccttccatgccccagcag caccaccacccctcccagctcccttcccaccaccagctgaccccgtcggggctgcccccg ggcccactgcatccctccctgcttagctaccagcagcatcagcacctcctacgccgaggg ggggcccccatgccacagatgaattcacacaatatctgggagaacaacatgggatttggg cctgtgagcgtcacccctggactaatcactcaaatggaggacagtccacttatgtccatc atcaaagaggtggggctgcccaatcggcctccgccagttatgagcgaggatgggcgggac ttgtcggaaagggcccccccgcctcgctcgtcctctcccgtgattggaagcccaccagtg agggctgtgcctatcgggactccgcccaagcagccgatgagtcatgctatgaatcatcat catcagcagcagatccaccaccccaccaccgttcatgtgcgagccccggtccaccaccaa caccgctaccccccttccttccctgagcgcatctcccccaacaccctcttaaacatggct aactctcctctgtgtcgtcctccattcccggccggcgtgggccccgttctgtcccagatc caacgtgcccagatgctcaactctcaggttgctggcttccccaggggctgtcagggcccc ccgttgctgcctggcggtggaggcttcaggcccttcttcggccagccccctccccacagg atgggtccccaccacaaccacgtaccctgtcccatcatccggcacaacaccacgcacctg cacccccagcaccgccgcatgctcacccagaggatgcagagtagaggaggtgagcgtggc gggcgtgtgggggattggcggagcagggacccctacagtaacttgatgacccagagggag aaggagtgggtggccaagatccagatgatgcagctgcagagcactgatccctacctggat gactactactaccagaattactttgagaagatggagaagaggcaggagagagacagagac ggcgtgaggaaggagcacaccaccaaactcatcaccccccaggtggccaagctggaacac acctacagaccagtgcagtttgcaggctcactgggtaagctgactgtgtccagcgtcaac aaccccaggaagatgatcgacacagtggtgaccagtcgcactgatgacgaggagaagaga gagaaacaggtgtggaataagagacggcagatcctctacactgtggagaagatgtacagt ctgctgctggaggtgcaggactttgagaagcgcttcatgcagacgccggaggagcagaga gaggccctgctggagcagcacaaaactcacacgctgcagctctacgcctccctcaaggag aaggagtgggacgacagagtgagtgacgagcagtgtctgttgatcatgtcggtgcgtaag ggaaagcgcctgatctccaggctcatccctttcctgcctccgctgcaggctgccaccgtt gtcatggggattgcccggaacctgcccgccctggccaagaaagacaaacaggaccaggcg ctgtgctggttggtggagcccgttgccgtggtgatctcttccttatctagcgccgccctc acagacttgctgcaggagctgcaaggcaacgagggtcaactgtccaaagtgttgcaaaat aagtttggtgtgacgctgctttacctgatcctgagtgaaggagagcgaatgcaaagctcc gaccttaactgtcaactcatggatgacaatcgatggacggagttggtgttctctgtgacc agggagctgctcaacgtgcccccctcgtccctgtcccctcctctcttcacccctcccaac ctgctctctctcttctcgcgttacgtagaccgacagaggctggagctgctgcaggagaag ttacagatctccgcattgtccaggtag

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