Salmo trutta (river trout): 115192032
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Entry
115192032 CDS
T08542
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
115192032
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115192032
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115192032
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Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Nop14
NPR3
PFF1_TM
Sec62
Motif
Other DBs
NCBI-GeneID:
115192032
NCBI-ProteinID:
XP_029605979
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Position
4:complement(21123386..21133992)
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AA seq
678 aa
AA seq
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MISTSSTRPFLAVAPRISPNMATDTEEDSEDEIDETSPGPGRLFNVNNSNNNEEEEKKKK
KKEKKEKKEKKEKKKEKKKQKEQEEKEKEEKEKEEKEKEEKEKKEKEEKEKKEKEKKEGA
KEVFFINPAGSLYYNWLFIITIPVMYNWTMIIARACFEELQHNHLVTWMILDYISDVLYL
ADMAFRTRTAYLEQGLLVKDKKLLWERYISSLQFKLDAISMLPTDVFYIYLGINYPEIRL
NKLLRITRMMEFFTRTETKTNYTNLFRISNLVMYIIIIIHWNACLYYSFSKSIGFGSDPW
VYPDLNDPEEPEFGELGRKYSFSLYWSTLTLTTIGETPSPELDSEFFFHVLDFLVGVLIF
ATLVGNISSMISNISAARVEFQARIDNIKQYMQKWKVDKDLELRVITWFDYLWTNDKAQD
ERETLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLIELVLKLQPQVFSPGDYICKK
GDIGREMYIVKEGKLAVVADDGIKQFCVLGDGSYFGEISILAIKGSKAGNRRTANIRSIG
YSDLFCLSKDDLMESLTEYPEAKGMLEEKGRQILLKDGLLELDPSKIIPETTEIEEKVNR
MYSNLELMQAKLKKLLGDYSISQRATRERIAEIERLTGEVVAEEDLDEEEKEGGEEEKKE
GEAEEKKDDEKKEEEEEK
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcacatcaagcactcgtccgtttctggcggttgcgcctcgcatttctccaaac
atggccacagacacagaggaggacagtgaggatgaaatagatgaaacttctcctggccca
gggcgtctgttcaatgtcaacaacagtaacaacaatgaggaggaggagaagaaaaagaag
aaaaaggagaagaaagaaaagaaagagaaaaaagagaaaaagaaagaaaagaagaagcag
aaagagcaggaggagaaagaaaaggaggagaaagaaaaggaggagaaagaaaaggaggag
aaagaaaaaaaggaaaaagaggaaaaggagaaaaaggagaaagagaaaaaggagggggcc
aaagaagtgtttttcatcaatccagcgggcagtctgtactacaactggctgttcattatc
acaataccagtcatgtacaattggaccatgataatagccagggcctgctttgaggagctg
cagcataatcacctagtcacctggatgattctggactacatctctgatgtcctctacctg
gctgacatggccttcaggaccaggacagcctacctggagcaaggcctgctggtcaaagac
aagaagctgctgtgggaacgttatatcagcagcctccagttcaagctggacgccatctcc
atgctgcccaccgatgtgttttacatctacctggggatcaactaccccgagatccgcctc
aacaagctcctccgaatcacgcgtatgatggagtttttcacccgcaccgagaccaagacc
aactacaccaacctcttccgcatctccaacctggtcatgtacatcatcatcatcatccac
tggaacgcctgcctctactactccttctctaagtccatcggcttcggctctgacccctgg
gtctacccggacctgaatgacccagaagagccagagttcggcgaactggggaggaagtac
tccttcagcctctactggtccacgctgacgctgaccaccatcggcgagacgccatcaccg
gagctagactcagagttcttcttccatgtgctggacttccttgtgggtgtgcttatcttc
gccaccctggtgggaaacatcagctccatgatctccaacatcagcgctgcgagggtcgag
tttcaggcacgcatcgacaacatcaagcagtacatgcagaagtggaaggtggataaggac
ctggagctgcgagtcatcacgtggttcgactacctgtggaccaacgacaaggctcaggac
gaaagggagacgctgcggtacctgcccgacaagctcagggccgaaatcgccattaacgtc
cacctggatactctcaagaaggtccgcatcttcgctgactgcgaagcgggcctgctgatt
gagctggtgctcaagttgcagccccaggtcttcagccctggcgactacatctgtaagaag
ggcgacatcggccgtgagatgtatattgtcaaggagggcaagctggcggtggtggctgat
gatggcatcaagcagttctgcgtgctgggagacggcagctactttggggagatcagtatc
ctagcgataaagggttctaaggcagggaaccggaggacggccaacatccgcagcattggc
tactcagatctcttctgcctgtccaaggatgacctgatggagtcattgactgagtaccca
gaagccaagggcatgctggaggagaaaggtcgtcagatcctgctgaaggatggcctgctg
gaactggacccttccaaaattatccccgaaaccacagaaattgaggaaaaggtgaaccgc
atgtacagcaacctggagttgatgcaggccaagctgaagaagctgctgggagactacagc
atcagccagagggccacgagggaacgcatcgctgagatagagcggctgactggagaggtt
gtagcagaggaggacctagatgaggaggagaaggagggaggggaggaggagaaaaaggaa
ggggaggcagaagagaagaaggatgatgagaagaaagaggaggaggaggagaagtag
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