Salmo trutta (river trout): 115192069
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Entry
115192069 CDS
T08542
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00061
Fatty acid biosynthesis
stru00071
Fatty acid degradation
stru01100
Metabolic pathways
stru01212
Fatty acid metabolism
stru03320
PPAR signaling pathway
stru04146
Peroxisome
stru04216
Ferroptosis
stru04920
Adipocytokine signaling pathway
Module
stru_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
115192069
00071 Fatty acid degradation
115192069
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115192069
09143 Cell growth and death
04216 Ferroptosis
115192069
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115192069
03320 PPAR signaling pathway
115192069
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
stru01004
]
115192069
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115192069
Enzymes [BR:
stru01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
115192069
Lipid biosynthesis proteins [BR:
stru01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115192069
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of breast milk
115192069
Exosomal proteins of breast cancer cells
115192069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
115192069
NCBI-ProteinID:
XP_029606042
Ensembl:
ENSSTUG00000018889
LinkDB
All DBs
Position
4:22490949..22547173
Genome browser
AA seq
697 aa
AA seq
DB search
MQAQELLRQLRIPELEDVRQYMHSLPTNMLMGVGALAALTTYWYATRPKALKPPCDLNMQ
SVAMVGDGYVRRSILNNDDEHMTHYYSDARTMYEVFLRGMRVSNDGPCLGSRKPNQPYEW
LSYREVADKAECIGSALLHRGHSQTGDKHIGIFSQNRPEWTISELACYTYSLVCVPLYDT
LGLEAIEYIINQAAVSTVICDLADKARLILDCVRGKEHTLKTIVLMEAFDEELVDRGQQS
GIEILSLKDVEAVGKAHYHQPLPPTPEDLALICFTSGTTGNPKGGMLTHGNVIANCAAFI
KITESVLKPSTKDVLISFLPLAHMFERVFEGVILVHGARIGYFQGDIRLLMDDLKTLQPT
VFPVVPRLLNRMFDKIFGQANTPLKRWLLVFASRRKHAEMMNGVVRKDSLWDKLIFQKVQ
NSLGGRVRLMITGAAPVSPTVLTFLRAALGCQFYEGYGQTECTAGCTMSMPGDWTAGHVG
APLPCNYVKLVDVTEMNYFAANGEGEVCVKGPNVFKGYLNDPEKTKEALDQDGWLHTGDI
GKWLPNGILKIVDRKKHIFKLAQGEYIAPEKVENIYIRSDPVAQIFVHGDSLQACLVGIV
VPDPDSLPGWAKKKGIEGSYLEMCASKELKNAILEDILRLGKEGGLKSFEQVRDISLHTE
MFSVQNGLLTPTLKAKRTDLRGHFREQIDLLYAKIKM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcccaggagctcctgagacagctgcggatcccagagctggaggatgtgcgccag
tacatgcacagcctgcccaccaacatgctgatgggtgtgggcgcccttgccgccctcacc
acctactggtacgccacgcggcccaaggccctcaagccgccctgcgacctcaacatgcag
tcagtggccatggtgggtgacggttacgtcaggcggtccattctgaataacgacgatgag
cacatgacgcactactacagtgacgcgcggaccatgtacgaagtattcctcagaggcatg
cgggtgtccaatgatgggccctgtctaggatcaagaaaacccaaccagccttacgagtgg
ctgtcataccgagaggttgcagacaaagccgagtgcattggctcggctctccttcacagg
gggcactcccagactggagacaagcatattggcatcttttcccagaacaggccagagtgg
accatttcagagctggcctgttacacatactccctggtgtgtgtaccactgtatgacacg
ctaggcctcgaggccattgaatacatcatcaaccaagccgccgtctctacagtgatctgc
gacttggcggacaaagcgcggctcatcctggactgcgtgaggggtaaggagcacacattg
aagaccatcgtgctcatggaggccttcgacgaggagctggtggaccgcgggcagcagagc
ggcatcgagatccttagcctgaaggatgtggaggctgttggcaaagcccactaccaccag
ccattgcccccaacaccagaggacctggcactcatctgcttcactagtggaaccacagga
aacccaaagggtggaatgcttacacatggcaatgttatcgccaattgtgctgctttcatc
aagataacagagagcgtactcaagcccagcactaaggatgtgctcatctccttcctgcca
ttggcccacatgtttgagagggtttttgagggagtgatcctggtgcacggtgcacggatt
ggctactttcagggggacattcggctcctgatggacgacctgaagaccctgcagccaaca
gtcttccctgtcgtcccccgtctgctcaaccgcatgtttgacaagatcttcggacaggcc
aacacgccactgaaaagatggctgctggttttcgcctccaggaggaagcatgcagagatg
atgaatggcgtagtcaggaaggacagcttgtgggacaagctcatcttccaaaaagtccag
aacagtcttgggggtcgtgtgaggctgatgataacaggagcggccccagtgtctccaacc
gtcctgaccttccttcgggctgctcttggctgccagttttatgaaggctatggtcagact
gagtgcacagccgggtgcaccatgtccatgcctggggactggacagcaggtcatgtgggg
gctccactgccctgcaactatgtaaagctggtggacgtgactgagatgaactactttgct
gccaatggggaaggagaggtgtgtgtgaaaggaccaaacgtattcaagggctacctgaat
gacccagagaagacaaaggaggccttggatcaggatggctggctccacaccggagacatt
gggaagtggctgcctaatggtattctgaagatcgtggacaggaagaagcacatcttcaag
ctggctcaaggagagtacattgccccggagaaggtcgagaacatctacatccggagcgac
ccggtggcccagatctttgtccatggcgatagcttgcaggcatgcctggtgggcattgtg
gtgcctgatccagactccttaccaggatgggcaaagaagaagggcatcgagggttcttat
ttggagatgtgtgcaagcaaggagttgaaaaatgccattctggaggacattctgaggctg
gggaaagaaggggggctgaagtcttttgagcaggtgagggatatctcgctgcacacggag
atgttctccgtccagaacggcctcctgacgcccacgctaaaggccaagaggaccgacctc
cgcggtcacttccgagagcagattgacctgctctatgccaagatcaagatgtga
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