Salmo trutta (river trout): 115192209
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Entry
115192209 CDS
T08542
Name
(RefSeq) pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115192209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115192209
Spliceosome [BR:
stru03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
115192209
Complex C
U4/U6.U5 tri-SnRNP related factors
115192209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Wap1
Motif
Other DBs
NCBI-GeneID:
115192209
NCBI-ProteinID:
XP_029606309
Ensembl:
ENSSTUG00000005917
LinkDB
All DBs
Position
4:complement(30243727..30247864)
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AA seq
308 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMALKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELQHVDEFIDELLHSERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSEEEDEEEEKTERVQTPEPHRRSYRDNDRPRRSPSPRYRRSSRSPRR
RSRSPKRRSPSPRRERHRSKSPRRHRSRERRHRSKSPGHHRSHRHRSHSKSPERSSKKSH
KKSRRGNV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataggacggttaaagatgccaacagtatacatggaacaaatccacaatacttg
gtggagaaaattattcgtactcgaatctatgaatcaaaatactggaaagaagaatgcttt
ggactgacggctgaacttgtcgttgacaaagccatggcgctgaagtttgtcggtggagtt
tatggcggaaatatcaaacctacaccgttcctgtgtctcactctgaagatgctgcagatc
cagccagagaaagacatcattgtagaattcatcaaaaacgaggatttcaaatatgtccgc
ttgcttggcgccatgtacatgaggttgactgggacatcggtggattgctacaaatacctg
gaaccactgtacaacgactacagaaaaatcaagagtcagaaccgaaatggggagtttgag
ttgcaacacgtcgatgagtttattgatgaactgctacactctgagagaatgtgtgacata
atccttcccaggcttcagaaaaggcaggttcttgaggaggcggagctgttagacacacgc
atcagtgccctggaagaagacctggatgaggtggagaccagcgaagaggaagatgaggaa
gaggagaagacagagagagttcagaccccagagccccacagacggagttaccgagacaac
gatcggcctcgccgctcgccctctccacgctacagacgcagcagtcgttcacccagacgg
aggagcagatcacctaagagacgaagcccatcccccagacgagaacgtcaccgcagcaaa
agcccccgtcgccaccgctcccgagagaggcgtcaccgctcaaagtccccagggcatcac
agaagccacaggcaccgcagtcactccaaatccccagagaggagttcaaaaaagagccac
aagaagagtcgaagaggaaacgtgtga
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