Salmo trutta (river trout): 115192256
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Entry
115192256 CDS
T08542
Name
(RefSeq) rho GTPase-activating protein SYDE2-like isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115192256
Membrane trafficking [BR:
stru04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
115192256
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
C2
Motif
Other DBs
NCBI-GeneID:
115192256
NCBI-ProteinID:
XP_029606413
LinkDB
All DBs
Position
4:33410129..33501191
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AA seq
1808 aa
AA seq
DB search
MADPLRRTLLAKLRGKKSKKGTPAGGYGAAANGGREGKEKVSQNPDGQARPVVMFAELHC
VADNIMRGNESYVNGIVENKVGSVWEQSTVGVKTSVFPQQDEVPATMHINTSRGPGDNQG
SGGSGFRGRVNGELLGVSLQIATQYGGHDRYEMGRIHKQVPGYFSRQVQQEHIGRPHEQR
KHFGPIPRQYSAGDSIGFGGSSPNNNIIYHRRPGVVDREVVKLTGGHSPVSKSNGTNGCF
DTYLKTRVSDGQADSCHQTVYNYKAENAQRSINDLKGKANLLPGHNQILETNVTTNWMQM
YPLDVLCAHHPTGSYTEENIVIRNIESDGSSPEFTGDNIRVTHLQSPTFFPTELEMCDVN
VASHFICAREGTLRHHSIDSEDDDYYDNEILPFYISESVGPNDRKGSDKVESIESGIDLP
KGHAISDSVQETDRLHSQLKEAYYLLINAMHDISFEGQVSVNGFIDQKSMCSWSSFKHVG
SDALSSGEYSAQQVSDMDSLLLCLLSENNNLISKSLVNLSASRIRPPLLRSTSDGTIKYS
SGVHNGPCIQGLGSQSPSVVGACEDGDGASRPKAVGASDPFEKQTSYDGGTSSDDLLQDT
GDNGKLNESRGSVNSLTGSSDNAEPQQGGNNNRDREMSGWALDQGGSGKPHGVTVNKMQE
WMHKGRLLSSEMKQRIAGSTLQPYGAHGGLDRAPRPSQGQVSSGPGGSKPKALMTRVDRA
KPAAVVSCQGQATQKSALIENDHSSFSNGLDVGGGKAVETSLWRPPLNTITVSKKRNWLQ
QSSGRPHHATDDPRYRLGAEEYNGHGQAPLSTLSPSPENLNPPGPTLSHPLCLHLPLIRM
GHARVAPRSGCVEPTEENDADDEGEIWYNPIPEDEELELHHSHRPTPTPQVRLMVQTRPQ
DPHVPQTQRRPSREVEAGVRWALEGCSPNLEGVGESMGGGGGERSQQGIAIRCMGPSLHL
QRQMLLACKPQECPSSSSRATATAEAPDLAISGFPPPSSLNPAKKGSSLNWSFPDKIKSP
RTVRKLSMKMKKLPELSRKLSVKGTPSNNNNSSCNGARASSNLETRTQYPKTNYGSEPGP
APPRLSPRGGQGAAASHNVISRYHLDSSVSTQQSYSKKKSSGTSKSASKGGYLSDGDSPE
LVAKSGKHGSSEAKGGNGKEKDPATGGGEKTGAGGVTRGSGSPKLHGTELDIDAFRHYAF
TEQPKCTQYISGLMSLHFYGAEDLKPPRFDSRDVYCAIQVDSVNKARTALLTCRTTFLDM
DHTFNIELENAQHLKLVVFSWDPTSKKNRVCCYGTVVLPALFRVSRSHQLAVKLEPRGLI
YVKLNLMEQWQNSLDGGYNGDREPQMFGVEAWRVVVRENTGLMLPLLIEKCITEIETRGC
QVVGLYRLCGSASVKKELREAFERDSLGVELCENTYPDINVITGVLKDYLRELPYPLITK
HLYETVLDSMAQRPLRIGAGGCENDPADTEHTVSLLENLPEVERLTLRRLLDHLKLVASH
HEVNKMTCQNLAVCFGPVLLSQRQEASCHSNRVFIDSEELASALHFKKHIEVLHYLLQLW
PVVDPHDKTSSPILEPPGPADQPAIPPLRRRKDRPQVLNLSNAEMAGVLRPRPGRLDSPS
NRYAGDWSRCGESYFPPPLSREENDYADVPSEDMEVTEEELEGVEDKGQEGGEEQRHEWL
LDRGQAEPATVEQEPPLPEEVMEGPVDVETEEREAEEESEAEKRVEESDGSSGSQPSDDR
VCDDDDDDKRILPLHLPKEHTYQAYMKIQDISPVLSNKVNLRDLQESIDTLIGNLERELN
KNKLNVGY
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctgcggaggactttactagcaaaacttcgggggaagaaatccaagaaa
gggacaccggctgggggatacggcgctgcagctaatgggggcagagaaggtaaagaaaaa
gtttctcaaaacccagacggacaagctcgtccagtagtaatgttcgcagagttgcattgt
gtggcagacaatatcatgagaggtaacgagagttatgtgaacgggattgtagaaaacaag
gttggatccgtttgggagcagagcacggtaggagttaagactagtgtgtttccccagcag
gacgaggttccagctaccatgcacataaacactagccgggggccgggagacaatcagggt
agcgggggctcggggtttaggggtcgagttaatggagaactcttgggggtctcacttcaa
atagcaacacagtacggggggcacgatagatacgagatgggcagaatccataaacaagtg
ccaggctacttctcgagacaagtacaacaagaacacatcgggagaccgcacgaacagaga
aaacactttggccccattccgcgacagtacagcgcaggggactccatagggttcggtggc
agtagtcctaataataacattatataccacagacggcctggtgttgtagatcgagaggta
gttaaactgacaggtggccactctcctgtttcaaagagcaatgggacaaatggctgcttt
gacacatatctaaagactcgagtcagcgacgggcaggcagactcctgccatcaaactgtg
tacaactacaaggcagagaacgcgcagaggtcaataaatgatttaaaaggcaaggcaaat
ttgcttcctggccacaaccaaatattggaaacaaacgttacaactaactggatgcaaatg
tatccgctggatgtcctatgtgcacatcatccgaccggtagttacaccgaggaaaacatt
gttattagaaacatcgagagtgacgggagctcgcctgaatttaccggggacaacattagg
gtgacacatttgcagagtcccacattcttcccaactgaattggagatgtgcgacgtaaac
gtggcttcccatttcatatgcgctagagagggaacactccgacaccactctatagatagc
gaggatgacgattattatgataacgaaattctccccttttacatatcggagtcagtagga
ccgaatgacagaaaaggctctgataaagtagaaagcatagagtcgggaatagatcttcca
aaaggacatgccatcagtgacagtgtgcaggagacagacagactacatagccagttgaaa
gaggcgtattacctgcttataaacgccatgcatgatattagttttgaaggtcaggtcagt
gtcaacggatttatagatcagaagagcatgtgctcatggtcgtccttcaagcacgtgggc
agtgatgctttgtcatctggagagtacagtgcccaacaggtgtctgacatggactcgctc
ctattgtgcctactgagtgaaaataataatttaattagcaagagccttgtgaacctatct
gctagcaggattaggccccccttactgcgttccactagtgacggaactatcaaatactcc
agtggtgtgcacaatgggccctgtatccagggcctcggttcccaaagcccttcggttgtt
ggggcctgtgaggatggggatggagcaagtaggccgaaggctgttggagcctctgaccca
tttgagaaacagactagctacgatggtggcacgagcagcgacgacctgctccaagacacc
ggtgacaatggcaagttaaacgagagtagaggctcggtcaacagccttaccgggtcatcc
gacaatgcagaaccccagcagggtggtaacaacaatcgagacagagagatgagtggttgg
gctctggaccagggaggttctggcaagccccacggtgtcaccgtcaacaagatgcaggag
tggatgcacaaaggccgcctactgtcatctgagatgaagcagcgcatcgcagggtccacg
ctccaaccctatggtgctcacggtggcctggatagggcaccacggcccagccagggccag
gtcagctcggggccaggtggatctaaaccaaaagccctgatgaccagagttgacagggct
aaaccagccgcagtggtctcatgccagggccaggcaacgcagaagtcagctctgatagaa
aatgaccactcctccttctccaacggccttgatgtgggcgggggcaaggccgtcgagacg
tcgctatggagacccccgctcaacaccatcaccgtctccaagaaacgtaactggctccag
cagagctctgggaggccgcatcacgccacggacgacccccggtaccgtctgggagcagag
gaatacaatggacacggacaagctccactctccactcttagcccctccccagagaaccta
aaccctcctgggccaaccctatcccaccccctctgcctacacctgcccctcattagaatg
ggccacgcccgtgtggcgcctcgttccgggtgtgtggaaccgactgaggagaatgatgcg
gacgatgagggggagatctggtacaaccccatccctgaggatgaggaactagagctgcat
cacagccacagacccactcccaccccccaggtcaggctgatggtccagacacggccccag
gatcctcacgtcccccagacccagaggaggcccagcagggaagtggaggccggggtcagg
tgggccctggagggatgcagccctaacctggagggtgtgggggagagcatgggtggcgga
ggtggagagcggagtcagcaggggattgccatacgttgcatggggccgtctctacatctg
caaagacagatgctgctcgcgtgcaaacctcaggagtgcccatccagttccagcagagcc
acagctacagcagaagcccctgacctggccatctctggcttcccgccgccctccagcctc
aaccctgccaaaaagggaagctccctcaactggtcattcccggacaagatcaagtcccca
cgcactgtcaggaaactctcaatgaagatgaagaagcttccggaactcagccgcaagctc
agcgtaaaagggacccctagcaacaacaacaacagtagctgcaacggagccagagcgagc
agcaacttagagacaaggacccagtatcccaaaaccaattacggttcagaaccaggcccg
gctcctcccaggttgtccccaaggggtggacagggggcggcggctagccataatgtgatc
tcgaggtatcacctggacagcagtgtgtcgacgcaacaaagctacagcaagaagaagagc
agcgggacctccaagtcggctagcaaggggggctacctcagtgacggggactccccagaa
ctggtggccaagtctgggaagcacgggtcctcagaggccaagggaggcaatgggaaggag
aaagacccagccactggaggaggagagaaaacaggagctggaggagtaaccagaggaagt
ggcagccccaagctgcacggcacagaactagacattgacgcgttccgccactacgccttc
acagaacagcctaagtgcacccaatacatctcgggcctgatgagcctgcacttctacggc
gccgaggacctcaagccaccacgcttcgactcccgagacgtctactgtgccatccaggtg
gactcggtcaacaaggcgcgcactgccctgctcacctgtcgaaccaccttcctagacatg
gaccacaccttcaacattgagctggagaacgcccagcacctgaagctagtggtgttcagc
tgggaccccacatccaagaagaaccgggtgtgctgttacggcacagtggtgttaccggca
ctcttcagggtgagcaggagtcatcagctggcggtgaagctggagcctcgaggcctgatc
tacgtgaagctgaacctgatggagcagtggcagaactccctggatggaggctacaatggg
gaccgggagccacagatgtttggggtggaggcctggagggtggtggtgagggaaaacacg
ggactcatgctgcccctgctcatcgagaagtgcatcacggagatcgagacgagaggctgc
caggttgtgggcctctaccgtctgtgtggctcagcatcagtaaagaaggagctgcgggag
gcctttgagagggacagcctaggagtggagctctgtgaaaacacctaccctgacatcaac
gtcatcacaggtgttctgaaggactacctgcgtgagttgccctacccccttatcactaag
cacttgtatgagactgtgttggactctatggctcagagacctctgcgtatcggagcagga
ggatgtgaaaatgacccggcagacacagaacacaccgtcagtctcctggagaacctgcca
gaggtggagaggttgaccctgcggaggctgctggaccatctgaagctggtggcgtcacac
catgaggtcaacaagatgacgtgtcagaacctagcggtatgcttcggccccgtgctgctc
agccaacgccaggaggccagctgtcatagcaaccgggtcttcatcgactcggaggagctg
gccagcgccctgcacttcaagaaacatattgaagtgctacactacctgctgcagctatgg
ccagtggtggacccacatgacaagacctcgtcccccatcctggagccccccggcccagcc
gaccagccggccattccccccctgcgtcggaggaaggaccgcccccaggtgctgaacttg
agcaatgcagagatggccggggtgctgcggcccaggccgggccgactggacagccctagc
aaccgttacgccggggactggagccgctgtggagagagctacttcccccctcctctgtcc
cgggaggagaatgactatgctgatgttccttctgaggatatggaggtcactgaagaggaa
ctggagggggtagaggacaagggacaggaaggaggagaggagcagagacatgaatggtta
ctggacaggggacaggcagagccagccacagtcgaacaggagcccccgctacccgaggag
gtgatggaaggacctgtagacgtggagacagaggagagggaagcagaggaggagagcgaa
gcagagaagagagtggaggagagcgatggctccagtggcagtcaaccgtcagacgacagg
gtgtgtgatgatgatgatgatgataagcgcatcctgcccctccatctccccaaagagcac
acgtaccaggcctacatgaagatccaggacatcagccccgtgctcagcaacaaggtcaac
ctgcgagacctgcaggagagcatcgacacgcttataggcaacctggagagagaactcaac
aagaacaagctcaacgtcggctactga
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